RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 CASKO14936 926 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 TSPAN1O60635 241 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 METTL18O95568 372 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 ATP5C1P36542 298 aaKnown RBP6.28□□□□□ -1.4
SSH1-202ENST00000326495 PLK1P53350 603 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 PPP3R1P63098 170 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 RASAL3Q86YV0 1011 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 MARCH10Q8NA82 808 aaPredicted RBP6.28□□□□□ -1.4
SSH1-202ENST00000326495 LRRC20Q8TCA0 184 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 UNC93B1Q9H1C4 597 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 PORCNQ9H237 461 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 PTTG3PQ9NZH4 202 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 ZNF282Q9UDV7 671 aaPredicted RBP6.28□□□□□ -1.4
SSH1-202ENST00000326495 MYLKQ15746 1914 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 DPPA5A6NC42 116 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 NPHS1O60500 1241 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 AMHR2Q16671 573 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 MARK1Q9P0L2 795 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 hCG_1818297A0A087WSY0 165 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 TTLL13PA6NNM8 815 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 KCNK1O00180 336 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 NOL4O94818 638 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 GJB6O95452 261 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 CTSHP09668 335 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 EPORP19235 508 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 CBX3Q13185 183 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 ZNF169Q14929 603 aaPredicted RBP6.28□□□□□ -1.4
SSH1-202ENST00000326495 GNASQ5JWF2 1037 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 FRMD7Q6ZUT3 714 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 SLC44A3Q8N4M1 653 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 ZNF527Q8NB42 609 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 ELMO1Q92556 727 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 TAMM41Q96BW9 452 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 PANX1Q96RD7 426 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 ZYG11BQ9C0D3 744 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 OR6C75A6NL08 312 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 RFXANKO14593 260 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 B3GALNT1O75752 331 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 NTSR2O95665 410 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 KIR3DL1P43629 444 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 SLC7A2P52569 658 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 LIPEQ05469 1076 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 GRIK2Q13002 908 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 VMACQ2NL98 169 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.28□□□□□ -1.4
SSH1-202ENST00000326495 MRPL41Q8IXM3 137 aaKnown RBP6.28□□□□□ -1.4
SSH1-202ENST00000326495 RNF148Q8N7C7 305 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 ZNF548Q8NEK5 533 aaPredicted RBP6.28□□□□□ -1.4
SSH1-202ENST00000326495 BRSK1Q8TDC3 778 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 AURKBQ96GD4 344 aaPredicted RBP6.28□□□□□ -1.4
SSH1-202ENST00000326495 INPP4AQ96PE3 977 aaPredicted RBP6.28□□□□□ -1.4
SSH1-202ENST00000326495 NODALQ96S42 347 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 SYT15Q9BQS2 421 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 BCL2L14Q9BZR8 327 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 ALG2Q9H553 416 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 TAS2R8Q9NYW2 309 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 SH3BGRL2Q9UJC5 107 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 ECM29Q5VYK3 1845 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 ARL6IP5O75915 188 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 FMO4P31512 558 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 ZIK1Q3SY52 487 aaPredicted RBP6.28□□□□□ -1.4
SSH1-202ENST00000326495 CTXN3Q4LDR2 81 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 CPTPQ5TA50 214 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 LRRC55Q6ZSA7 311 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 PLPPR4Q7Z2D5 763 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 ZBED6CLQ96FA7 236 aaPredicted RBP6.28□□□□□ -1.4
SSH1-202ENST00000326495 NPAS2Q99743 824 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 NFKBIZQ9BYH8 718 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 CLDN4O14493 209 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 RAB36O95755 333 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 GNPDA1P46926 289 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 MIB1Q86YT6 1006 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 ZC3H10Q96K80 434 aaKnown RBP6.28□□□□□ -1.4
SSH1-202ENST00000326495 GPATCH1Q9BRR8 931 aaKnown RBP6.28□□□□□ -1.4
SSH1-202ENST00000326495 SLC22A4Q9H015 551 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 GPRC5CQ9NQ84 441 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 NUDT4Q9NZJ9 180 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 IGSF9Q9P2J2 1179 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 HACL1Q9UJ83 578 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 RPL36Q9Y3U8 105 aaKnown RBP6.28□□□□□ -1.4
SSH1-202ENST00000326495 RICTORQ6R327 1708 aa6.28□□□□□ -1.4
SSH1-202ENST00000326495 SLC12A8A0AV02 714 aa6.27□□□□□ -1.4
SSH1-202ENST00000326495 CLPXO76031 633 aa6.27□□□□□ -1.4
SSH1-202ENST00000326495 HLA-DQA2P01906 255 aa6.27□□□□□ -1.4
SSH1-202ENST00000326495 CTSKP43235 329 aa6.27□□□□□ -1.4
SSH1-202ENST00000326495 PTPN9P43378 593 aa6.27□□□□□ -1.4
SSH1-202ENST00000326495 IRF8Q02556 426 aa6.27□□□□□ -1.4
SSH1-202ENST00000326495 PGM5Q15124 567 aa6.27□□□□□ -1.4
SSH1-202ENST00000326495 AP5B1Q2VPB7 878 aa6.27□□□□□ -1.4
SSH1-202ENST00000326495 FAM182AQ5T1J6 154 aa6.27□□□□□ -1.4
SSH1-202ENST00000326495 ADGRD1Q6QNK2 874 aa6.27□□□□□ -1.4
SSH1-202ENST00000326495 MSANTD1Q6ZTZ1 278 aa6.27□□□□□ -1.4
SSH1-202ENST00000326495 MON1AQ86VX9 555 aa6.27□□□□□ -1.4
SSH1-202ENST00000326495 P2RY8Q86VZ1 359 aa6.27□□□□□ -1.4
SSH1-202ENST00000326495 SLC41A1Q8IVJ1 513 aa6.27□□□□□ -1.4
SSH1-202ENST00000326495 CPSF7Q8N684 471 aaKnown RBP6.27□□□□□ -1.4
SSH1-202ENST00000326495 CORO1BQ9BR76 489 aa6.27□□□□□ -1.4
SSH1-202ENST00000326495 HSPE1-MOB4S4R3N1 261 aa6.27□□□□□ -1.4
SSH1-202ENST00000326495 A0A1B0GUL6 1792 aa6.27□□□□□ -1.41
SSH1-202ENST00000326495 TCRBV5S4A2TA0A5A2 114 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms