RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 ACTR5Q9H9F9 607 aaPredicted RBP18.18■□□□□ 0.5
USP39-201ENST00000323701 DNAJC28Q9NX36 388 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 LMCD1Q9NZU5 365 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 F8W8V4 182 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 K7EQS6 105 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 AREL1O15033 823 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 SMIM24O75264 130 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 ADRB3P13945 408 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 EIF2DP41214 584 aaKnown RBP18.18■□□□□ 0.5
USP39-201ENST00000323701 SEC13P55735 322 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 ACOX1Q15067 660 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 SBSNQ6UWP8 590 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 INPP5DQ92835 1189 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 ADAMTS6Q9UKP5 1117 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 FIS1Q9Y3D6 152 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 STON1Q9Y6Q2 735 aa18.18■□□□□ 0.5
USP39-201ENST00000323701 K7ESM1 405 aa18.17■□□□□ 0.5
USP39-201ENST00000323701 SGTAO43765 313 aa18.17■□□□□ 0.5
USP39-201ENST00000323701 GFAPP14136 432 aa18.17■□□□□ 0.5
USP39-201ENST00000323701 EPHA3P29320 983 aa18.17■□□□□ 0.5
USP39-201ENST00000323701 CCR7P32248 378 aa18.17■□□□□ 0.5
USP39-201ENST00000323701 PSMD8P48556 350 aa18.17■□□□□ 0.5
USP39-201ENST00000323701 DCDC1P59894 354 aa18.17■□□□□ 0.5
USP39-201ENST00000323701 KCNJ2P63252 427 aa18.17■□□□□ 0.5
USP39-201ENST00000323701 ASPHQ12797 758 aa18.17■□□□□ 0.5
USP39-201ENST00000323701 PDCD2Q16342 344 aaPredicted RBP18.17■□□□□ 0.5
USP39-201ENST00000323701 C18orf21Q32NC0 220 aaPredicted RBP18.17■□□□□ 0.5
USP39-201ENST00000323701 C2orf27AQ580R0 203 aa18.17■□□□□ 0.5
USP39-201ENST00000323701 IER5LQ5T953 404 aa18.17■□□□□ 0.5
USP39-201ENST00000323701 FBXL19Q6PCT2 694 aa18.17■□□□□ 0.5
USP39-201ENST00000323701 DLG3Q92796 817 aa18.17■□□□□ 0.5
USP39-201ENST00000323701 SLC7A6OSQ96CW6 309 aaPredicted RBP18.17■□□□□ 0.5
USP39-201ENST00000323701 EPS15L1Q9UBC2 864 aa18.17■□□□□ 0.5
USP39-201ENST00000323701 CAPN14A8MX76 684 aa18.17■□□□□ 0.5
USP39-201ENST00000323701 ANHXE9PGG2 379 aa18.17■□□□□ 0.5
USP39-201ENST00000323701 H0YHG0 523 aa18.17■□□□□ 0.5
USP39-201ENST00000323701 NEMP1O14524 444 aa18.17■□□□□ 0.5
USP39-201ENST00000323701 CD1EP15812 388 aa18.17■□□□□ 0.5
USP39-201ENST00000323701 ZDHHC20Q5W0Z9 365 aa18.17■□□□□ 0.5
USP39-201ENST00000323701 UGT3A1Q6NUS8 523 aa18.17■□□□□ 0.5
USP39-201ENST00000323701 ERAP2Q6P179 960 aa18.17■□□□□ 0.5
USP39-201ENST00000323701 CUZD1Q86UP6 607 aa18.17■□□□□ 0.5
USP39-201ENST00000323701 CHPFQ8IZ52 775 aa18.17■□□□□ 0.5
USP39-201ENST00000323701 ZBTB2Q8N680 514 aa18.17■□□□□ 0.5
USP39-201ENST00000323701 BEND7Q8N7W2 519 aaPredicted RBP18.17■□□□□ 0.5
USP39-201ENST00000323701 UCMAQ8WVF2 138 aa18.17■□□□□ 0.5
USP39-201ENST00000323701 PDLIM5Q96HC4 596 aaKnown RBP18.17■□□□□ 0.5
USP39-201ENST00000323701 COQ10AQ96MF6 247 aa18.17■□□□□ 0.5
USP39-201ENST00000323701 SIKE1Q9BRV8 207 aa18.17■□□□□ 0.5
USP39-201ENST00000323701 HDAC3O15379 428 aa18.16■□□□□ 0.5
USP39-201ENST00000323701 MMP20O60882 483 aa18.16■□□□□ 0.5
USP39-201ENST00000323701 APODP05090 189 aa18.16■□□□□ 0.5
USP39-201ENST00000323701 P2RY2P41231 377 aa18.16■□□□□ 0.5
USP39-201ENST00000323701 KIR2DL1P43626 348 aaPredicted RBP18.16■□□□□ 0.5
USP39-201ENST00000323701 SH3BP2P78314 561 aa18.16■□□□□ 0.5
USP39-201ENST00000323701 CNTN1Q12860 1018 aa18.16■□□□□ 0.5
USP39-201ENST00000323701 CLEC6AQ6EIG7 209 aa18.16■□□□□ 0.5
USP39-201ENST00000323701 CYHR1Q6ZMK1 362 aa18.16■□□□□ 0.5
USP39-201ENST00000323701 ASRGL1Q7L266 308 aa18.16■□□□□ 0.5
USP39-201ENST00000323701 PTCD3Q96EY7 689 aaKnown RBP18.16■□□□□ 0.5
USP39-201ENST00000323701 SMOXQ9NWM0 555 aa18.16■□□□□ 0.5
USP39-201ENST00000323701 GRXCR2A6NFK2 248 aa18.15■□□□□ 0.5
USP39-201ENST00000323701 PRR5-ARHGAP8B1AHC4 643 aa18.15■□□□□ 0.5
USP39-201ENST00000323701 E9PBE3 544 aa18.15■□□□□ 0.5
USP39-201ENST00000323701 KLHL41O60662 606 aa18.15■□□□□ 0.5
USP39-201ENST00000323701 DNAJC8O75937 253 aaPredicted RBP18.15■□□□□ 0.5
USP39-201ENST00000323701 SOD1P00441 154 aa18.15■□□□□ 0.5
USP39-201ENST00000323701 EEF1DP29692 281 aaKnown RBP18.15■□□□□ 0.5
USP39-201ENST00000323701 AKT1P31749 480 aa18.15■□□□□ 0.5
USP39-201ENST00000323701 TIE1P35590 1138 aa18.15■□□□□ 0.5
USP39-201ENST00000323701 ARHGAP8P85298 464 aa18.15■□□□□ 0.5
USP39-201ENST00000323701 TGFBIQ15582 683 aa18.15■□□□□ 0.5
USP39-201ENST00000323701 PPP1R3AQ16821 1122 aa18.15■□□□□ 0.5
USP39-201ENST00000323701 SEL1L3Q68CR1 1132 aa18.15■□□□□ 0.5
USP39-201ENST00000323701 GPSM1Q86YR5 675 aa18.15■□□□□ 0.5
USP39-201ENST00000323701 FBXO39Q8N4B4 442 aa18.15■□□□□ 0.5
USP39-201ENST00000323701 ZNF513Q8N8E2 541 aaPredicted RBP18.15■□□□□ 0.5
USP39-201ENST00000323701 CCDC106Q9BWC9 280 aa18.15■□□□□ 0.5
USP39-201ENST00000323701 SAR1AQ9NR31 198 aa18.15■□□□□ 0.5
USP39-201ENST00000323701 SPATS2LQ9NUQ6 558 aaKnown RBP18.15■□□□□ 0.5
USP39-201ENST00000323701 APOBEC2Q9Y235 224 aaKnown RBP18.15■□□□□ 0.5
USP39-201ENST00000323701 INPP4BO15327 924 aa18.15■□□□□ 0.5
USP39-201ENST00000323701 KLK8O60259 260 aa18.15■□□□□ 0.5
USP39-201ENST00000323701 SERPINA6P08185 405 aa18.15■□□□□ 0.5
USP39-201ENST00000323701 ATP1B2P14415 290 aaPredicted RBP18.15■□□□□ 0.5
USP39-201ENST00000323701 DRD3P35462 400 aa18.15■□□□□ 0.5
USP39-201ENST00000323701 ENPP2Q13822 863 aa18.15■□□□□ 0.5
USP39-201ENST00000323701 PHKG1Q16816 387 aa18.15■□□□□ 0.5
USP39-201ENST00000323701 ERN2Q76MJ5 926 aaKnown RBP18.15■□□□□ 0.5
USP39-201ENST00000323701 VRK3Q8IV63 474 aa18.15■□□□□ 0.5
USP39-201ENST00000323701 AADATQ8N5Z0 425 aa18.15■□□□□ 0.5
USP39-201ENST00000323701 TRAM1L1Q8N609 369 aa18.15■□□□□ 0.5
USP39-201ENST00000323701 ULK4Q96C45 1275 aa18.15■□□□□ 0.5
USP39-201ENST00000323701 AP2M1Q96CW1 435 aa18.15■□□□□ 0.5
USP39-201ENST00000323701 ZBTB26Q9HCK0 441 aa18.15■□□□□ 0.5
USP39-201ENST00000323701 SERGEFQ9UGK8 458 aa18.15■□□□□ 0.5
USP39-201ENST00000323701 DNAH14Q0VDD8 3507 aa18.15■□□□□ 0.5
USP39-201ENST00000323701 OR2AG2A6NM03 316 aa18.14■□□□□ 0.49
USP39-201ENST00000323701 WNT9AO14904 365 aa18.14■□□□□ 0.49
USP39-201ENST00000323701 SKAP2O75563 359 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms