RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 ADI1Q9BV57 179 aa17.22■□□□□ 0.35
COL9A1-201ENST00000320755 CLK4Q9HAZ1 481 aaKnown RBP17.22■□□□□ 0.35
COL9A1-201ENST00000320755 H0YJX3 145 aa17.22■□□□□ 0.35
COL9A1-201ENST00000320755 PCNAP12004 261 aa17.22■□□□□ 0.35
COL9A1-201ENST00000320755 CR2P20023 1033 aa17.22■□□□□ 0.35
COL9A1-201ENST00000320755 SEMG2Q02383 582 aa17.22■□□□□ 0.35
COL9A1-201ENST00000320755 RCAN2Q14206 197 aa17.22■□□□□ 0.35
COL9A1-201ENST00000320755 LCN8Q6JVE9 175 aa17.22■□□□□ 0.35
COL9A1-201ENST00000320755 FAM151BQ6UXP7 276 aa17.22■□□□□ 0.35
COL9A1-201ENST00000320755 SPATA19Q7Z5L4 167 aa17.22■□□□□ 0.35
COL9A1-201ENST00000320755 CLDN19Q8N6F1 224 aa17.22■□□□□ 0.35
COL9A1-201ENST00000320755 CENPNQ96H22 339 aaPredicted RBP17.22■□□□□ 0.35
COL9A1-201ENST00000320755 ANKRD60Q9BZ19 345 aa17.22■□□□□ 0.35
COL9A1-201ENST00000320755 STARD7Q9NQZ5 370 aa17.22■□□□□ 0.35
COL9A1-201ENST00000320755 C2orf78A6NCI8 922 aa17.22■□□□□ 0.35
COL9A1-201ENST00000320755 ZNF840PA6NDX5 716 aa17.22■□□□□ 0.35
COL9A1-201ENST00000320755 E2F3O00716 465 aa17.22■□□□□ 0.35
COL9A1-201ENST00000320755 DLGAP1O14490 977 aa17.22■□□□□ 0.35
COL9A1-201ENST00000320755 VPS4BO75351 444 aa17.22■□□□□ 0.35
COL9A1-201ENST00000320755 STC2O76061 302 aa17.22■□□□□ 0.35
COL9A1-201ENST00000320755 MTPNP58546 118 aa17.22■□□□□ 0.35
COL9A1-201ENST00000320755 NR6A1Q15406 480 aa17.22■□□□□ 0.35
COL9A1-201ENST00000320755 SGO1Q5FBB7 561 aa17.22■□□□□ 0.35
COL9A1-201ENST00000320755 ALG1LQ6GMV1 187 aa17.22■□□□□ 0.35
COL9A1-201ENST00000320755 TRPV3Q8NET8 790 aa17.22■□□□□ 0.35
COL9A1-201ENST00000320755 MYRFLQ96LU7 910 aa17.22■□□□□ 0.35
COL9A1-201ENST00000320755 APOL5Q9BWW9 433 aa17.22■□□□□ 0.35
COL9A1-201ENST00000320755 EVLQ9UI08 416 aaPredicted RBP17.22■□□□□ 0.35
COL9A1-201ENST00000320755 H0Y626 953 aa17.21■□□□□ 0.35
COL9A1-201ENST00000320755 FFAR3O14843 346 aa17.21■□□□□ 0.35
COL9A1-201ENST00000320755 PFDN6O15212 129 aa17.21■□□□□ 0.35
COL9A1-201ENST00000320755 GPR42O15529 346 aa17.21■□□□□ 0.35
COL9A1-201ENST00000320755 NBNO60934 754 aa17.21■□□□□ 0.35
COL9A1-201ENST00000320755 TRMUO75648 421 aaKnown RBP17.21■□□□□ 0.35
COL9A1-201ENST00000320755 GALTP07902 379 aa17.21■□□□□ 0.35
COL9A1-201ENST00000320755 ZNF23P17027 643 aa17.21■□□□□ 0.35
COL9A1-201ENST00000320755 GGT5P36269 586 aa17.21■□□□□ 0.35
COL9A1-201ENST00000320755 OR4D2P58180 307 aa17.21■□□□□ 0.35
COL9A1-201ENST00000320755 ARF5P84085 180 aa17.21■□□□□ 0.35
COL9A1-201ENST00000320755 MERTKQ12866 999 aa17.21■□□□□ 0.35
COL9A1-201ENST00000320755 PLCL1Q15111 1095 aa17.21■□□□□ 0.35
COL9A1-201ENST00000320755 Q6ZSR9 355 aa17.21■□□□□ 0.35
COL9A1-201ENST00000320755 PROKR1Q8TCW9 393 aa17.21■□□□□ 0.35
COL9A1-201ENST00000320755 ARIH1Q9Y4X5 557 aaPredicted RBP17.21■□□□□ 0.35
COL9A1-201ENST00000320755 SLC30A1Q9Y6M5 507 aa17.21■□□□□ 0.35
COL9A1-201ENST00000320755 PLXNA3P51805 1871 aa17.21■□□□□ 0.35
COL9A1-201ENST00000320755 K7ERQ8 282 aa17.21■□□□□ 0.35
COL9A1-201ENST00000320755 G6PDP11413 515 aa17.21■□□□□ 0.35
COL9A1-201ENST00000320755 GDF5P43026 501 aa17.21■□□□□ 0.35
COL9A1-201ENST00000320755 USP41Q3LFD5 358 aa17.21■□□□□ 0.35
COL9A1-201ENST00000320755 LRRC8DQ7L1W4 858 aa17.21■□□□□ 0.35
COL9A1-201ENST00000320755 SFRP1Q8N474 314 aa17.21■□□□□ 0.35
COL9A1-201ENST00000320755 TMEM199Q8N511 208 aa17.21■□□□□ 0.35
COL9A1-201ENST00000320755 RIC8BQ9NVN3 520 aa17.21■□□□□ 0.35
COL9A1-201ENST00000320755 ETAA1Q9NY74 926 aa17.21■□□□□ 0.35
COL9A1-201ENST00000320755 LEF1Q9UJU2 399 aaPredicted RBP17.21■□□□□ 0.35
COL9A1-201ENST00000320755 RIMKLBQ9ULI2 386 aa17.21■□□□□ 0.35
COL9A1-201ENST00000320755 PKP3Q9Y446 797 aa17.21■□□□□ 0.35
COL9A1-201ENST00000320755 MKI67P46013 3256 aaKnown RBP17.2■□□□□ 0.34
COL9A1-201ENST00000320755 FAM155AB1AL88 458 aaPredicted RBP17.2■□□□□ 0.34
COL9A1-201ENST00000320755 STX16O14662 325 aa17.2■□□□□ 0.34
COL9A1-201ENST00000320755 TRIM16O95361 564 aa17.2■□□□□ 0.34
COL9A1-201ENST00000320755 CST5P28325 142 aaPredicted RBP17.2■□□□□ 0.34
COL9A1-201ENST00000320755 GKP32189 559 aa17.2■□□□□ 0.34
COL9A1-201ENST00000320755 ZFP36L2P47974 494 aaKnown RBP17.2■□□□□ 0.34
COL9A1-201ENST00000320755 ERVK-8P63133 956 aa17.2■□□□□ 0.34
COL9A1-201ENST00000320755 CREB5Q02930 508 aa17.2■□□□□ 0.34
COL9A1-201ENST00000320755 PLD1Q13393 1074 aa17.2■□□□□ 0.34
COL9A1-201ENST00000320755 ZIK1Q3SY52 487 aaPredicted RBP17.2■□□□□ 0.34
COL9A1-201ENST00000320755 PTRHD1Q6GMV3 140 aaKnown RBP17.2■□□□□ 0.34
COL9A1-201ENST00000320755 OGFOD2Q6N063 350 aa17.2■□□□□ 0.34
COL9A1-201ENST00000320755 KIAA1841Q6NSI8 718 aa17.2■□□□□ 0.34
COL9A1-201ENST00000320755 LYSMD3Q7Z3D4 306 aa17.2■□□□□ 0.34
COL9A1-201ENST00000320755 TRIM54Q9BYV2 358 aa17.2■□□□□ 0.34
COL9A1-201ENST00000320755 RPF2Q9H7B2 306 aaKnown RBP17.2■□□□□ 0.34
COL9A1-201ENST00000320755 RSL24D1Q9UHA3 163 aaKnown RBP17.2■□□□□ 0.34
COL9A1-201ENST00000320755 ANAPC2Q9UJX6 822 aa17.2■□□□□ 0.34
COL9A1-201ENST00000320755 ILVBLA1L0T0 632 aa17.2■□□□□ 0.34
COL9A1-201ENST00000320755 CLOCKO15516 846 aa17.2■□□□□ 0.34
COL9A1-201ENST00000320755 RHOAP61586 193 aa17.2■□□□□ 0.34
COL9A1-201ENST00000320755 ANKS3Q6ZW76 656 aa17.2■□□□□ 0.34
COL9A1-201ENST00000320755 CHST15Q7LFX5 561 aaPredicted RBP17.2■□□□□ 0.34
COL9A1-201ENST00000320755 C9orf16Q9BUW7 83 aa17.2■□□□□ 0.34
COL9A1-201ENST00000320755 BOCQ9BWV1 1114 aa17.2■□□□□ 0.34
COL9A1-201ENST00000320755 CIPCQ9C0C6 399 aa17.2■□□□□ 0.34
COL9A1-201ENST00000320755 NSUN3Q9H649 340 aaKnown RBP17.2■□□□□ 0.34
COL9A1-201ENST00000320755 F11P03951 625 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 YAP1P46937 504 aaKnown RBP17.19■□□□□ 0.34
COL9A1-201ENST00000320755 HSPA7P48741 367 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 CCT8P50990 548 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 NKX3-2P78367 333 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 PRKG2Q13237 762 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 SELPLGQ14242 412 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 ADRM1Q16186 407 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 ADGRF1Q5T601 910 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 TXNDC11Q6PKC3 985 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 ARHGAP22Q7Z5H3 698 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 BIRC7Q96CA5 298 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 EID2BQ96D98 161 aa17.19■□□□□ 0.34
COL9A1-201ENST00000320755 ABCG8Q9H221 673 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms