RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 PGLSO95336 258 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 TOP3BO95985 862 aaKnown RBP13.53□□□□□ -0.24
DDX54-202ENST00000314045 CAPN1P07384 714 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 FCGR1AP12314 374 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 MRPL43Q8N983 215 aaKnown RBP13.53□□□□□ -0.24
DDX54-202ENST00000314045 ZNF514Q96K75 400 aaPredicted RBP13.53□□□□□ -0.24
DDX54-202ENST00000314045 RNF145Q96MT1 663 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 NLNQ9BYT8 704 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 OXSMQ9NWU1 459 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 MAPRE3Q9UPY8 281 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 NRP2O60462 931 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 SIX3O95343 332 aaPredicted RBP13.53□□□□□ -0.24
DDX54-202ENST00000314045 CLDN9O95484 217 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 UBTFL6P0CB48 400 aaPredicted RBP13.53□□□□□ -0.24
DDX54-202ENST00000314045 ITPRIPL2Q3MIP1 535 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 ZNF438Q7Z4V0 828 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 ZNF513Q8N8E2 541 aaPredicted RBP13.53□□□□□ -0.24
DDX54-202ENST00000314045 OR10G6Q8NH81 332 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 SPPL2AQ8TCT8 520 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 PYDC1Q8WXC3 89 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 SMARCD2Q92925 531 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 MRM3Q9HC36 420 aaKnown RBP13.53□□□□□ -0.24
DDX54-202ENST00000314045 HCFC1R1Q9NWW0 138 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 MOCS1Q9NZB8 636 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 FAF1Q9UNN5 650 aaPredicted RBP13.53□□□□□ -0.24
DDX54-202ENST00000314045 POLR3HQ9Y535 204 aaPredicted RBP13.53□□□□□ -0.24
DDX54-202ENST00000314045 A0A088AWK7 358 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 SCAMP1O15126 338 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 DLX3O60479 287 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 ENTPD5O75356 428 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 ZNF10P21506 573 aaPredicted RBP13.53□□□□□ -0.24
DDX54-202ENST00000314045 CCT8P50990 548 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 CHIT1Q13231 466 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 GTF2H2Q13888 395 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 GTF2H2CQ6P1K8 395 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 PAGE2Q7Z2X7 111 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 RAD51AP1Q96B01 352 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 SGK2Q9HBY8 427 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 DNAJC28Q9NX36 388 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 NDOR1Q9UHB4 597 aa13.53□□□□□ -0.24
DDX54-202ENST00000314045 GSAPA4D1B5 854 aa13.52□□□□□ -0.24
DDX54-202ENST00000314045 SAC3D1A6NKF1 404 aa13.52□□□□□ -0.24
DDX54-202ENST00000314045 HEPACAM2A8MVW5 462 aa13.52□□□□□ -0.24
DDX54-202ENST00000314045 C8GP07360 202 aa13.52□□□□□ -0.24
DDX54-202ENST00000314045 ZNF30P17039 623 aa13.52□□□□□ -0.24
DDX54-202ENST00000314045 LSM12Q3MHD2 195 aaKnown RBP13.52□□□□□ -0.24
DDX54-202ENST00000314045 ZFP1Q6P2D0 407 aa13.52□□□□□ -0.24
DDX54-202ENST00000314045 IZUMO2Q6UXV1 221 aa13.52□□□□□ -0.24
DDX54-202ENST00000314045 APCDD1Q8J025 514 aa13.52□□□□□ -0.24
DDX54-202ENST00000314045 OR6Y1Q8NGX8 325 aa13.52□□□□□ -0.24
DDX54-202ENST00000314045 NUS1Q96E22 293 aa13.52□□□□□ -0.24
DDX54-202ENST00000314045 ZSCAN5AQ9BUG6 496 aa13.52□□□□□ -0.24
DDX54-202ENST00000314045 NKX2-4Q9H2Z4 354 aa13.52□□□□□ -0.24
DDX54-202ENST00000314045 RHBGQ9H310 441 aa13.52□□□□□ -0.24
DDX54-202ENST00000314045 ZNF395Q9H8N7 513 aaPredicted RBP13.52□□□□□ -0.24
DDX54-202ENST00000314045 SPAG4Q9NPE6 437 aa13.52□□□□□ -0.24
DDX54-202ENST00000314045 A0A0J9YYE9 177 aa13.52□□□□□ -0.25
DDX54-202ENST00000314045 DEAF1O75398 565 aaPredicted RBP13.52□□□□□ -0.25
DDX54-202ENST00000314045 ATF6P18850 670 aa13.52□□□□□ -0.25
DDX54-202ENST00000314045 MTHFRP42898 656 aa13.52□□□□□ -0.25
DDX54-202ENST00000314045 HSPA13P48723 471 aa13.52□□□□□ -0.25
DDX54-202ENST00000314045 TRAF2Q12933 501 aa13.52□□□□□ -0.25
DDX54-202ENST00000314045 MBTPS1Q14703 1052 aa13.52□□□□□ -0.25
DDX54-202ENST00000314045 ANKRD33Q7Z3H0 272 aa13.52□□□□□ -0.25
DDX54-202ENST00000314045 C2CD4AQ8NCU7 369 aaPredicted RBP13.52□□□□□ -0.25
DDX54-202ENST00000314045 RTP3Q9BQQ7 232 aa13.52□□□□□ -0.25
DDX54-202ENST00000314045 LRTM1Q9HBL6 345 aa13.52□□□□□ -0.25
DDX54-202ENST00000314045 BLOC1S6Q9UL45 172 aa13.52□□□□□ -0.25
DDX54-202ENST00000314045 ENTPD4Q9Y227 616 aa13.52□□□□□ -0.25
DDX54-202ENST00000314045 FFAR2O15552 330 aa13.52□□□□□ -0.25
DDX54-202ENST00000314045 DYRK3O43781 588 aa13.52□□□□□ -0.25
DDX54-202ENST00000314045 RFPL1O75677 317 aa13.52□□□□□ -0.25
DDX54-202ENST00000314045 FYNP06241 537 aa13.52□□□□□ -0.25
DDX54-202ENST00000314045 UROSP10746 265 aa13.52□□□□□ -0.25
DDX54-202ENST00000314045 CD68P34810 354 aaPredicted RBP13.52□□□□□ -0.25
DDX54-202ENST00000314045 SKP1P63208 163 aa13.52□□□□□ -0.25
DDX54-202ENST00000314045 BNIP1Q12981 228 aa13.52□□□□□ -0.25
DDX54-202ENST00000314045 DHCR24Q15392 516 aa13.52□□□□□ -0.25
DDX54-202ENST00000314045 SF1Q15637 639 aaKnown RBP13.52□□□□□ -0.25
DDX54-202ENST00000314045 RANBP10Q6VN20 620 aa13.52□□□□□ -0.25
DDX54-202ENST00000314045 GK5Q6ZS86 529 aa13.52□□□□□ -0.25
DDX54-202ENST00000314045 CLHC1Q8NHS4 586 aa13.52□□□□□ -0.25
DDX54-202ENST00000314045 KHSRPQ92945 711 aaKnown RBP eCLIP13.52□□□□□ -0.25
DDX54-202ENST00000314045 LENG8Q96PV6 779 aaPredicted RBP13.52□□□□□ -0.25
DDX54-202ENST00000314045 NPAS2Q99743 824 aa13.52□□□□□ -0.25
DDX54-202ENST00000314045 OSBPL7Q9BZF2 842 aa13.52□□□□□ -0.25
DDX54-202ENST00000314045 KLHL4Q9C0H6 718 aa13.52□□□□□ -0.25
DDX54-202ENST00000314045 POLMQ9NP87 494 aaPredicted RBP13.52□□□□□ -0.25
DDX54-202ENST00000314045 NLE1Q9NVX2 485 aaPredicted RBP13.52□□□□□ -0.25
DDX54-202ENST00000314045 C16orf96A6NNT2 1141 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 MMP20O60882 483 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 LDLRP01130 860 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 ILF3Q12906 894 aaKnown RBP eCLIP13.51□□□□□ -0.25
DDX54-202ENST00000314045 MPP2Q14168 576 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 UBXN2BQ14CS0 331 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 AMZ2Q86W34 360 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 PHOSPHO2Q8TCD6 241 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 SORCS1Q8WY21 1168 aa13.51□□□□□ -0.25
DDX54-202ENST00000314045 ZNF641Q96N77 438 aaPredicted RBP13.51□□□□□ -0.25
DDX54-202ENST00000314045 ZNF317Q96PQ6 595 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms