RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 LZTFL1Q9NQ48 299 aa14.35□□□□□ -0.11
PPP1CA-201ENST00000312989 FOXJ2Q9P0K8 574 aa14.35□□□□□ -0.11
PPP1CA-201ENST00000312989 PISDQ9UG56 409 aa14.35□□□□□ -0.11
PPP1CA-201ENST00000312989 FEZ2Q9UHY8 353 aaPredicted RBP14.35□□□□□ -0.11
PPP1CA-201ENST00000312989 DNAJC16Q9Y2G8 782 aa14.35□□□□□ -0.11
PPP1CA-201ENST00000312989 PKP3Q9Y446 797 aa14.35□□□□□ -0.11
PPP1CA-201ENST00000312989 SLC30A1Q9Y6M5 507 aa14.35□□□□□ -0.11
PPP1CA-201ENST00000312989 IGLV3-16A0A075B6K0 115 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 TRBV5-4A0A0C4DH59 114 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 OR52A4PA6NMU1 304 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 GOLGA6L6A8MZA4 724 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 AGRPO00253 132 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 HGSO14964 777 aaPredicted RBP14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 NVLO15381 856 aaKnown RBP14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 RRP8O43159 456 aaKnown RBP14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 EFSO43281 561 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 PRAMEF10O60809 474 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 PRSS56P0CW18 603 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 FGF3P11487 239 aaPredicted RBP14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 ETS1P14921 441 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 CDKN1CP49918 316 aaPredicted RBP14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 EPHA4P54764 986 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 DRG2P55039 364 aaKnown RBP14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 ITGA9Q13797 1035 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 INSCQ1MX18 579 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 TMEM71Q6P5X7 295 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 PCSK4Q6UW60 755 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 ARHGEF18Q6ZSZ5 1173 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 ARHGAP22Q7Z5H3 698 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 SLC9B2Q86UD5 537 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 TAB3Q8N5C8 712 aaPredicted RBP14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 BEND7Q8N7W2 519 aaPredicted RBP14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 C1orf54Q8WWF1 131 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 KCNE4Q8WWG9 221 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 TMEM159Q96B96 161 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 DNAJC1Q96KC8 554 aaKnown RBP14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 PPP1R2P1Q96PQ5 205 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 SLC38A3Q99624 504 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 FERMT1Q9BQL6 677 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 LRRC40Q9H9A6 602 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 PIH1D1Q9NWS0 290 aaKnown RBP14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 MN1Q10571 1320 aaPredicted RBP14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 MROH6A6NGR9 719 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 OR2AG2A6NM03 316 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 OR5K4A6NMS3 321 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 C2orf81A6NN90 581 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 POP7O75817 140 aaKnown RBP14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 SUN1O94901 812 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 TPH1P17752 444 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 RPL10P27635 214 aaKnown RBP14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 GRIA1P42261 906 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 SRSF6Q13247 344 aaKnown RBP14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 TRA2AQ13595 282 aaKnown RBP eCLIP14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 NFE2L1Q14494 772 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 RPS6KA1Q15418 735 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 SEPT7Q16181 437 aaKnown RBP14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 KCTD19Q17RG1 926 aaPredicted RBP14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 BCL7AQ4VC05 210 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 SOWAHCQ53LP3 525 aaPredicted RBP14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 PHF19Q5T6S3 580 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 SEL1L2Q5TEA6 688 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 WDR74Q6RFH5 385 aaPredicted RBP14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 DTX1Q86Y01 620 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 TRAPPC5Q8IUR0 188 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 GPR150Q8NGU9 434 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 SNRNP27Q8WVK2 155 aaKnown RBP14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 LINC00615Q96LM1 132 aaPredicted RBP14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 CMKLR1Q99788 373 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 FRMD8P1Q9BZ68 369 aaPredicted RBP14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 OSGEPL1Q9H4B0 414 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 ASB8Q9H765 288 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 ETNK1Q9HBU6 452 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 SLC40A1Q9NP59 571 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 PPP2R2CQ9Y2T4 447 aa14.34□□□□□ -0.11
PPP1CA-201ENST00000312989 KALRNO60229 2985 aa14.33□□□□□ -0.12
PPP1CA-201ENST00000312989 CRTAMO95727 393 aa14.33□□□□□ -0.12
PPP1CA-201ENST00000312989 ZSCAN5DPP0CG00 497 aa14.33□□□□□ -0.12
PPP1CA-201ENST00000312989 SLC2A4P14672 509 aa14.33□□□□□ -0.12
PPP1CA-201ENST00000312989 STIP1P31948 543 aaKnown RBP14.33□□□□□ -0.12
PPP1CA-201ENST00000312989 TNNT3P45378 269 aaPredicted RBP14.33□□□□□ -0.12
PPP1CA-201ENST00000312989 TMPRSS15P98073 1019 aa14.33□□□□□ -0.12
PPP1CA-201ENST00000312989 SEMA5AQ13591 1074 aa14.33□□□□□ -0.12
PPP1CA-201ENST00000312989 TGIF1Q15583 401 aa14.33□□□□□ -0.12
PPP1CA-201ENST00000312989 DRICH1Q6PGQ1 229 aaPredicted RBP14.33□□□□□ -0.12
PPP1CA-201ENST00000312989 TMEM220Q6QAJ8 160 aa14.33□□□□□ -0.12
PPP1CA-201ENST00000312989 LRRC69Q6ZNQ3 347 aa14.33□□□□□ -0.12
PPP1CA-201ENST00000312989 TMEM26Q6ZUK4 368 aa14.33□□□□□ -0.12
PPP1CA-201ENST00000312989 PIANPQ8IYJ0 282 aa14.33□□□□□ -0.12
PPP1CA-201ENST00000312989 NXPE1Q8N323 547 aa14.33□□□□□ -0.12
PPP1CA-201ENST00000312989 GDAP1Q8TB36 358 aa14.33□□□□□ -0.12
PPP1CA-201ENST00000312989 USP7Q93009 1102 aa14.33□□□□□ -0.12
PPP1CA-201ENST00000312989 SGF29Q96ES7 293 aa14.33□□□□□ -0.12
PPP1CA-201ENST00000312989 DPH1Q9BZG8 443 aa14.33□□□□□ -0.12
PPP1CA-201ENST00000312989 B3GNT4Q9C0J1 378 aa14.33□□□□□ -0.12
PPP1CA-201ENST00000312989 FAM96AQ9H5X1 160 aa14.33□□□□□ -0.12
PPP1CA-201ENST00000312989 POT1Q9NUX5 634 aa14.33□□□□□ -0.12
PPP1CA-201ENST00000312989 NLE1Q9NVX2 485 aaPredicted RBP14.33□□□□□ -0.12
PPP1CA-201ENST00000312989 OCIAD1Q9NX40 245 aa14.33□□□□□ -0.12
PPP1CA-201ENST00000312989 SIDT1Q9NXL6 827 aaKnown RBP14.33□□□□□ -0.12
PPP1CA-201ENST00000312989 PCDHGA3Q9Y5H0 932 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms