RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 K7ESM1 405 aa22.23■■□□□ 1.15
IRF3-201ENST00000309877 QSOX1O00391 747 aa22.23■■□□□ 1.15
IRF3-201ENST00000309877 DLX3O60479 287 aa22.23■■□□□ 1.15
IRF3-201ENST00000309877 H2AFYO75367 372 aaKnown RBP22.23■■□□□ 1.15
IRF3-201ENST00000309877 SOD1P00441 154 aa22.23■■□□□ 1.15
IRF3-201ENST00000309877 NDUFV2P19404 249 aa22.23■■□□□ 1.15
IRF3-201ENST00000309877 DGKAP23743 735 aa22.23■■□□□ 1.15
IRF3-201ENST00000309877 ATP5F1P24539 256 aaPredicted RBP22.23■■□□□ 1.15
IRF3-201ENST00000309877 PRKAA2P54646 552 aa22.23■■□□□ 1.15
IRF3-201ENST00000309877 ASPHQ12797 758 aa22.23■■□□□ 1.15
IRF3-201ENST00000309877 SGCGQ13326 291 aa22.23■■□□□ 1.15
IRF3-201ENST00000309877 KHDC1Q4VXA5 237 aaKnown RBP22.23■■□□□ 1.15
IRF3-201ENST00000309877 LIPMQ5VYY2 423 aa22.23■■□□□ 1.15
IRF3-201ENST00000309877 KIAA1161Q6NSJ0 714 aa22.23■■□□□ 1.15
IRF3-201ENST00000309877 Q6ZS52 159 aa22.23■■□□□ 1.15
IRF3-201ENST00000309877 RHEBL1Q8TAI7 183 aa22.23■■□□□ 1.15
IRF3-201ENST00000309877 KIAA1191Q96A73 305 aa22.23■■□□□ 1.15
IRF3-201ENST00000309877 GRAMD1AQ96CP6 724 aa22.23■■□□□ 1.15
IRF3-201ENST00000309877 POLMQ9NP87 494 aaPredicted RBP22.23■■□□□ 1.15
IRF3-201ENST00000309877 LATS2Q9NRM7 1088 aa22.23■■□□□ 1.15
IRF3-201ENST00000309877 CNOT6Q9ULM6 557 aaKnown RBP22.23■■□□□ 1.15
IRF3-201ENST00000309877 PRUNE2Q8WUY3 3088 aa22.23■■□□□ 1.15
IRF3-201ENST00000309877 TSPAN12O95859 305 aa22.23■■□□□ 1.15
IRF3-201ENST00000309877 ADPRHP54922 357 aa22.23■■□□□ 1.15
IRF3-201ENST00000309877 TMEM115Q12893 351 aaPredicted RBP22.23■■□□□ 1.15
IRF3-201ENST00000309877 FAM124AQ86V42 546 aa22.23■■□□□ 1.15
IRF3-201ENST00000309877 FLCNQ8NFG4 579 aa22.23■■□□□ 1.15
IRF3-201ENST00000309877 STAG3L4Q8TBR4 150 aa22.23■■□□□ 1.15
IRF3-201ENST00000309877 CCDC126Q96EE4 140 aa22.23■■□□□ 1.15
IRF3-201ENST00000309877 PDLIM5Q96HC4 596 aaKnown RBP22.23■■□□□ 1.15
IRF3-201ENST00000309877 ZCCHC2Q9C0B9 1178 aaKnown RBP22.23■■□□□ 1.15
IRF3-201ENST00000309877 KLHL42Q9P2K6 505 aa22.23■■□□□ 1.15
IRF3-201ENST00000309877 TBC1D3DA0A087WVF3 549 aa22.22■■□□□ 1.15
IRF3-201ENST00000309877 TBC1D3IA0A087WXS9 549 aa22.22■■□□□ 1.15
IRF3-201ENST00000309877 TBC1D3EA0A087X179 549 aa22.22■■□□□ 1.15
IRF3-201ENST00000309877 TBC1D3KA0A087X1G2 549 aa22.22■■□□□ 1.15
IRF3-201ENST00000309877 TBC1D3FA6NER0 549 aaPredicted RBP22.22■■□□□ 1.15
IRF3-201ENST00000309877 TBC1D3LB9A6J9 549 aa22.22■■□□□ 1.15
IRF3-201ENST00000309877 BTN3A1O00481 513 aa22.22■■□□□ 1.15
IRF3-201ENST00000309877 RNGTTO60942 597 aaKnown RBP22.22■■□□□ 1.15
IRF3-201ENST00000309877 SMIM24O75264 130 aa22.22■■□□□ 1.15
IRF3-201ENST00000309877 PCCBP05166 539 aa22.22■■□□□ 1.15
IRF3-201ENST00000309877 TBC1D3HP0C7X1 549 aa22.22■■□□□ 1.15
IRF3-201ENST00000309877 C7P10643 843 aa22.22■■□□□ 1.15
IRF3-201ENST00000309877 TARSP26639 723 aaKnown RBP22.22■■□□□ 1.15
IRF3-201ENST00000309877 SF3A3Q12874 501 aaKnown RBP eCLIP22.22■■□□□ 1.151e-6■■■■□ 19.4
IRF3-201ENST00000309877 UBXN2BQ14CS0 331 aa22.22■■□□□ 1.15
IRF3-201ENST00000309877 OR4D1Q15615 310 aa22.22■■□□□ 1.15
IRF3-201ENST00000309877 TBC1D3GQ6DHY5 549 aa22.22■■□□□ 1.15
IRF3-201ENST00000309877 TBC1D3CQ6IPX1 549 aa22.22■■□□□ 1.15
IRF3-201ENST00000309877 TBC1D3Q8IZP1 549 aaPredicted RBP22.22■■□□□ 1.15
IRF3-201ENST00000309877 HMGB4Q8WW32 186 aa22.22■■□□□ 1.15
IRF3-201ENST00000309877 OSBPL6Q9BZF3 934 aa22.22■■□□□ 1.15
IRF3-201ENST00000309877 PREBQ9HCU5 417 aa22.22■■□□□ 1.15
IRF3-201ENST00000309877 THAP1Q9NVV9 213 aa22.22■■□□□ 1.15
IRF3-201ENST00000309877 RNF112Q9ULX5 631 aa22.22■■□□□ 1.15
IRF3-201ENST00000309877 ZFR2Q9UPR6 939 aaKnown RBP22.22■■□□□ 1.15
IRF3-201ENST00000309877 PLXNB3Q9ULL4 1909 aa22.22■■□□□ 1.15
IRF3-201ENST00000309877 A0A1W2PQU0 124 aa22.21■■□□□ 1.15
IRF3-201ENST00000309877 NPEPPSL1A6NEC2 478 aa22.21■■□□□ 1.15
IRF3-201ENST00000309877 FTH1P02794 183 aa22.21■■□□□ 1.15
IRF3-201ENST00000309877 TPBGLP0DKB5 382 aa22.21■■□□□ 1.15
IRF3-201ENST00000309877 KCNC1P48547 511 aa22.21■■□□□ 1.15
IRF3-201ENST00000309877 DGKEP52429 567 aa22.21■■□□□ 1.15
IRF3-201ENST00000309877 AGERQ15109 404 aa22.21■■□□□ 1.15
IRF3-201ENST00000309877 WSCD2Q2TBF2 565 aa22.21■■□□□ 1.15
IRF3-201ENST00000309877 PNCKQ6P2M8 343 aa22.21■■□□□ 1.15
IRF3-201ENST00000309877 MYO1HQ8N1T3 1032 aa22.21■■□□□ 1.15
IRF3-201ENST00000309877 RASGEF1AQ8N9B8 481 aa22.21■■□□□ 1.15
IRF3-201ENST00000309877 LTB4R2Q9NPC1 389 aa22.21■■□□□ 1.15
IRF3-201ENST00000309877 TSR3Q9UJK0 312 aaKnown RBP22.21■■□□□ 1.15
IRF3-201ENST00000309877 CCDC189A1A4V9 331 aa22.2■■□□□ 1.15
IRF3-201ENST00000309877 KRBA1A5PL33 1030 aa22.2■■□□□ 1.15
IRF3-201ENST00000309877 OR2AG2A6NM03 316 aa22.2■■□□□ 1.15
IRF3-201ENST00000309877 CHURC1-FNTBB4DL54 471 aa22.2■■□□□ 1.15
IRF3-201ENST00000309877 CDC7O00311 574 aa22.2■■□□□ 1.15
IRF3-201ENST00000309877 KPNA5O15131 536 aa22.2■■□□□ 1.15
IRF3-201ENST00000309877 KERAO60938 352 aa22.2■■□□□ 1.15
IRF3-201ENST00000309877 SNNO75324 88 aaPredicted RBP22.2■■□□□ 1.15
IRF3-201ENST00000309877 GABRG2P18507 467 aa22.2■■□□□ 1.15
IRF3-201ENST00000309877 CCR7P32248 378 aa22.2■■□□□ 1.15
IRF3-201ENST00000309877 SLC1A6P48664 564 aa22.2■■□□□ 1.15
IRF3-201ENST00000309877 TSNQ15631 228 aaKnown RBP22.2■■□□□ 1.15
IRF3-201ENST00000309877 ACSBG2Q5FVE4 666 aa22.2■■□□□ 1.15
IRF3-201ENST00000309877 CES4AQ5XG92 561 aa22.2■■□□□ 1.15
IRF3-201ENST00000309877 ADAMTSL4Q6UY14 1074 aa22.2■■□□□ 1.15
IRF3-201ENST00000309877 NAPRTQ6XQN6 538 aa22.2■■□□□ 1.15
IRF3-201ENST00000309877 PIGWQ7Z7B1 504 aa22.2■■□□□ 1.15
IRF3-201ENST00000309877 SLC22A9Q8IVM8 553 aa22.2■■□□□ 1.15
IRF3-201ENST00000309877 ZNF687Q8N1G0 1237 aa22.2■■□□□ 1.15
IRF3-201ENST00000309877 PGBD3Q8N328 593 aa22.2■■□□□ 1.15
IRF3-201ENST00000309877 PLA2G15Q8NCC3 412 aa22.2■■□□□ 1.15
IRF3-201ENST00000309877 KLK6Q92876 244 aa22.2■■□□□ 1.15
IRF3-201ENST00000309877 EXT2Q93063 718 aa22.2■■□□□ 1.15
IRF3-201ENST00000309877 HIC2Q96JB3 615 aa22.2■■□□□ 1.15
IRF3-201ENST00000309877 C7orf26Q96N11 449 aa22.2■■□□□ 1.15
IRF3-201ENST00000309877 GATA5Q9BWX5 397 aaPredicted RBP22.2■■□□□ 1.15
IRF3-201ENST00000309877 C1QTNF7Q9BXJ2 289 aa22.2■■□□□ 1.15
IRF3-201ENST00000309877 C1QTNF2Q9BXJ5 285 aa22.2■■□□□ 1.15
IRF3-201ENST00000309877 TRIM39Q9HCM9 518 aa22.2■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms