RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 RWDD2BP57060 319 aa19.2■□□□□ 0.66
LIME1-201ENST00000309546 EIF3EP60228 445 aaKnown RBP19.2■□□□□ 0.66
LIME1-201ENST00000309546 CYP4F2P78329 520 aa19.2■□□□□ 0.66
LIME1-201ENST00000309546 AADACL2Q6P093 401 aa19.2■□□□□ 0.66
LIME1-201ENST00000309546 TMEM26Q6ZUK4 368 aa19.2■□□□□ 0.66
LIME1-201ENST00000309546 ARHGAP22Q7Z5H3 698 aa19.2■□□□□ 0.66
LIME1-201ENST00000309546 BMPERQ8N8U9 685 aa19.2■□□□□ 0.66
LIME1-201ENST00000309546 BRSK1Q8TDC3 778 aa19.2■□□□□ 0.66
LIME1-201ENST00000309546 EXTL1Q92935 676 aa19.2■□□□□ 0.66
LIME1-201ENST00000309546 NKD1Q969G9 470 aa19.2■□□□□ 0.66
LIME1-201ENST00000309546 CXorf40BQ96DE9 158 aa19.2■□□□□ 0.66
LIME1-201ENST00000309546 MED8Q96G25 268 aa19.2■□□□□ 0.66
LIME1-201ENST00000309546 APOL2Q9BQE5 337 aa19.2■□□□□ 0.66
LIME1-201ENST00000309546 UGT1A7Q9HAW7 530 aa19.2■□□□□ 0.66
LIME1-201ENST00000309546 UGT1A10Q9HAW8 530 aa19.2■□□□□ 0.66
LIME1-201ENST00000309546 UGT1A8Q9HAW9 530 aa19.2■□□□□ 0.66
LIME1-201ENST00000309546 REXO2Q9Y3B8 237 aaKnown RBP19.2■□□□□ 0.66
LIME1-201ENST00000309546 CCDC66A2RUB6 948 aa19.19■□□□□ 0.66
LIME1-201ENST00000309546 OR52A4PA6NMU1 304 aa19.19■□□□□ 0.66
LIME1-201ENST00000309546 STX7O15400 261 aaKnown RBP19.19■□□□□ 0.66
LIME1-201ENST00000309546 KCNN4O15554 427 aa19.19■□□□□ 0.66
LIME1-201ENST00000309546 RAD1O60671 282 aa19.19■□□□□ 0.66
LIME1-201ENST00000309546 STK10O94804 968 aaKnown RBP19.19■□□□□ 0.66
LIME1-201ENST00000309546 UBXN7O94888 489 aa19.19■□□□□ 0.66
LIME1-201ENST00000309546 RBP3P10745 1247 aa19.19■□□□□ 0.66
LIME1-201ENST00000309546 BRAFP15056 766 aa19.19■□□□□ 0.66
LIME1-201ENST00000309546 AMD1P17707 334 aa19.19■□□□□ 0.66
LIME1-201ENST00000309546 FECHP22830 423 aa19.19■□□□□ 0.66
LIME1-201ENST00000309546 PSMB4P28070 264 aa19.19■□□□□ 0.66
LIME1-201ENST00000309546 AKT1P31749 480 aa19.19■□□□□ 0.66
LIME1-201ENST00000309546 CA5AP35218 305 aa19.19■□□□□ 0.66
LIME1-201ENST00000309546 CETN2P41208 172 aa19.19■□□□□ 0.66
LIME1-201ENST00000309546 OLIG2Q13516 323 aa19.19■□□□□ 0.66
LIME1-201ENST00000309546 ITGA9Q13797 1035 aa19.19■□□□□ 0.66
LIME1-201ENST00000309546 PTPRCAPQ14761 206 aa19.19■□□□□ 0.66
LIME1-201ENST00000309546 LDLRAP1Q5SW96 308 aa19.19■□□□□ 0.66
LIME1-201ENST00000309546 DARS2Q6PI48 645 aaKnown RBP19.19■□□□□ 0.66
LIME1-201ENST00000309546 C11orf96Q7Z7L8 435 aa19.19■□□□□ 0.66
LIME1-201ENST00000309546 KIAA1328Q86T90 577 aa19.19■□□□□ 0.66
LIME1-201ENST00000309546 PLXDC1Q8IUK5 500 aa19.19■□□□□ 0.66
LIME1-201ENST00000309546 CACNA2D3Q8IZS8 1091 aa19.19■□□□□ 0.66
LIME1-201ENST00000309546 RTP4Q96DX8 246 aa19.19■□□□□ 0.66
LIME1-201ENST00000309546 CALR3Q96L12 384 aaKnown RBP19.19■□□□□ 0.66
LIME1-201ENST00000309546 TGM7Q96PF1 710 aa19.19■□□□□ 0.66
LIME1-201ENST00000309546 GORASP1Q9BQQ3 440 aa19.19■□□□□ 0.66
LIME1-201ENST00000309546 LACRTQ9GZZ8 138 aa19.19■□□□□ 0.66
LIME1-201ENST00000309546 UCK1Q9HA47 277 aa19.19■□□□□ 0.66
LIME1-201ENST00000309546 APMAPQ9HDC9 416 aa19.19■□□□□ 0.66
LIME1-201ENST00000309546 POT1Q9NUX5 634 aa19.19■□□□□ 0.66
LIME1-201ENST00000309546 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.19■□□□□ 0.66
LIME1-201ENST00000309546 ARL5AQ9Y689 179 aa19.19■□□□□ 0.66
LIME1-201ENST00000309546 SLC30A1Q9Y6M5 507 aa19.19■□□□□ 0.66
LIME1-201ENST00000309546 MN1Q10571 1320 aaPredicted RBP19.19■□□□□ 0.66
LIME1-201ENST00000309546 KALRNO60229 2985 aa19.18■□□□□ 0.66
LIME1-201ENST00000309546 PRR19A6NJB7 356 aa19.18■□□□□ 0.66
LIME1-201ENST00000309546 OR2AG2A6NM03 316 aa19.18■□□□□ 0.66
LIME1-201ENST00000309546 PLA2G2AP14555 144 aa19.18■□□□□ 0.66
LIME1-201ENST00000309546 PBLDP30039 288 aaPredicted RBP19.18■□□□□ 0.66
LIME1-201ENST00000309546 HALP42357 657 aa19.18■□□□□ 0.66
LIME1-201ENST00000309546 VAV2P52735 878 aa19.18■□□□□ 0.66
LIME1-201ENST00000309546 CTSCP53634 463 aa19.18■□□□□ 0.66
LIME1-201ENST00000309546 MC2RQ01718 297 aa19.18■□□□□ 0.66
LIME1-201ENST00000309546 PRPSAP1Q14558 356 aa19.18■□□□□ 0.66
LIME1-201ENST00000309546 ANKRD20A2Q5SQ80 823 aa19.18■□□□□ 0.66
LIME1-201ENST00000309546 GPRC6AQ5T6X5 926 aa19.18■□□□□ 0.66
LIME1-201ENST00000309546 ANKRD20A1Q5TYW2 823 aa19.18■□□□□ 0.66
LIME1-201ENST00000309546 ANKRD20A3Q5VUR7 823 aa19.18■□□□□ 0.66
LIME1-201ENST00000309546 ABRAXAS1Q6UWZ7 409 aa19.18■□□□□ 0.66
LIME1-201ENST00000309546 RASGEF1AQ8N9B8 481 aa19.18■□□□□ 0.66
LIME1-201ENST00000309546 DDHD1Q8NEL9 900 aa19.18■□□□□ 0.66
LIME1-201ENST00000309546 ALG3Q92685 438 aa19.18■□□□□ 0.66
LIME1-201ENST00000309546 TEFMQ96QE5 360 aaKnown RBP19.18■□□□□ 0.66
LIME1-201ENST00000309546 OGFRQ9NZT2 677 aa19.18■□□□□ 0.66
LIME1-201ENST00000309546 EFR3BQ9Y2G0 817 aa19.18■□□□□ 0.66
LIME1-201ENST00000309546 COL6A6A6NMZ7 2263 aa19.18■□□□□ 0.66
LIME1-201ENST00000309546 GRID2IPA4D2P6 1211 aa19.17■□□□□ 0.66
LIME1-201ENST00000309546 BTNL10A8MVZ5 291 aa19.17■□□□□ 0.66
LIME1-201ENST00000309546 GAPDHSO14556 408 aaPredicted RBP19.17■□□□□ 0.66
LIME1-201ENST00000309546 PPFIA2O75334 1257 aa19.17■□□□□ 0.66
LIME1-201ENST00000309546 PRAMEF1O95521 474 aa19.17■□□□□ 0.66
LIME1-201ENST00000309546 PTMAP06454 111 aaKnown RBP19.17■□□□□ 0.66
LIME1-201ENST00000309546 LIFP15018 202 aa19.17■□□□□ 0.66
LIME1-201ENST00000309546 PTPN7P35236 360 aa19.17■□□□□ 0.66
LIME1-201ENST00000309546 GPR18Q14330 331 aa19.17■□□□□ 0.66
LIME1-201ENST00000309546 LINC00303Q3SY05 128 aa19.17■□□□□ 0.66
LIME1-201ENST00000309546 AGAP9Q5VTM2 703 aa19.17■□□□□ 0.66
LIME1-201ENST00000309546 TMEM220Q6QAJ8 160 aa19.17■□□□□ 0.66
LIME1-201ENST00000309546 CEACAM20Q6UY09 585 aa19.17■□□□□ 0.66
LIME1-201ENST00000309546 DET1Q7L5Y6 550 aa19.17■□□□□ 0.66
LIME1-201ENST00000309546 AMZ2Q86W34 360 aa19.17■□□□□ 0.66
LIME1-201ENST00000309546 CCDC110Q8TBZ0 833 aa19.17■□□□□ 0.66
LIME1-201ENST00000309546 DTX3LQ8TDB6 740 aa19.17■□□□□ 0.66
LIME1-201ENST00000309546 C9orf72Q96LT7 481 aa19.17■□□□□ 0.66
LIME1-201ENST00000309546 PSMD13Q9UNM6 376 aa19.17■□□□□ 0.66
LIME1-201ENST00000309546 WDR37Q9Y2I8 494 aa19.17■□□□□ 0.66
LIME1-201ENST00000309546 AAR2Q9Y312 384 aaKnown RBP19.17■□□□□ 0.66
LIME1-201ENST00000309546 C2orf81A6NN90 581 aa19.16■□□□□ 0.66
LIME1-201ENST00000309546 CAPN5O15484 640 aaPredicted RBP19.16■□□□□ 0.66
LIME1-201ENST00000309546 POP7O75817 140 aaKnown RBP19.16■□□□□ 0.66
LIME1-201ENST00000309546 RASSF9O75901 435 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms