RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 ESR1P03372 595 aa26.75■■□□□ 1.87
HDAC3-201ENST00000305264 SRP54P61011 504 aaKnown RBP26.75■■□□□ 1.87
HDAC3-201ENST00000305264 ZNF542PQ5EBM4 170 aa26.75■■□□□ 1.87
HDAC3-201ENST00000305264 SUMF1Q8NBK3 374 aa26.75■■□□□ 1.87
HDAC3-201ENST00000305264 LKAAEAR1Q8TD35 194 aa26.75■■□□□ 1.87
HDAC3-201ENST00000305264 ARRDC1-AS1Q9H2J1 176 aa26.75■■□□□ 1.87
HDAC3-201ENST00000305264 FSCN3Q9NQT6 498 aa26.75■■□□□ 1.87
HDAC3-201ENST00000305264 FETUBQ9UGM5 382 aa26.75■■□□□ 1.87
HDAC3-201ENST00000305264 KLF15Q9UIH9 416 aa26.75■■□□□ 1.87
HDAC3-201ENST00000305264 GPR89AB7ZAQ6 455 aa26.75■■□□□ 1.87
HDAC3-201ENST00000305264 TNFRSF10CO14798 259 aa26.75■■□□□ 1.87
HDAC3-201ENST00000305264 MAGEC1O60732 1142 aa26.75■■□□□ 1.87
HDAC3-201ENST00000305264 AP2A2O94973 939 aa26.75■■□□□ 1.87
HDAC3-201ENST00000305264 CFIP05156 583 aa26.75■■□□□ 1.87
HDAC3-201ENST00000305264 IVLP07476 585 aa26.75■■□□□ 1.87
HDAC3-201ENST00000305264 GPR89BP0CG08 455 aa26.75■■□□□ 1.87
HDAC3-201ENST00000305264 MPLP40238 635 aa26.75■■□□□ 1.87
HDAC3-201ENST00000305264 DPP6P42658 865 aa26.75■■□□□ 1.87
HDAC3-201ENST00000305264 SLCO1A2P46721 670 aa26.75■■□□□ 1.87
HDAC3-201ENST00000305264 PRLHRP49683 370 aa26.75■■□□□ 1.87
HDAC3-201ENST00000305264 LIMK2P53671 638 aa26.75■■□□□ 1.87
HDAC3-201ENST00000305264 CASP8Q14790 479 aa26.75■■□□□ 1.87
HDAC3-201ENST00000305264 CCDC6Q16204 474 aa26.75■■□□□ 1.87
HDAC3-201ENST00000305264 PLA2G4EQ3MJ16 856 aa26.75■■□□□ 1.87
HDAC3-201ENST00000305264 GRTP1Q5TC63 336 aa26.75■■□□□ 1.87
HDAC3-201ENST00000305264 RD3Q7Z3Z2 195 aa26.75■■□□□ 1.87
HDAC3-201ENST00000305264 GPATCH11Q8N954 259 aa26.75■■□□□ 1.87
HDAC3-201ENST00000305264 CARS2Q9HA77 564 aaKnown RBP26.75■■□□□ 1.87
HDAC3-201ENST00000305264 TM7SF3Q9NS93 570 aa26.75■■□□□ 1.87
HDAC3-201ENST00000305264 CTNNAL1Q9UBT7 734 aa26.75■■□□□ 1.87
HDAC3-201ENST00000305264 PCDHB1Q9Y5F3 818 aa26.75■■□□□ 1.87
HDAC3-201ENST00000305264 IKBKGQ9Y6K9 419 aa26.75■■□□□ 1.87
HDAC3-201ENST00000305264 SMIM23A6NLE4 172 aa26.74■■□□□ 1.87
HDAC3-201ENST00000305264 GRID2O43424 1007 aa26.74■■□□□ 1.87
HDAC3-201ENST00000305264 NIPSNAP2O75323 286 aa26.74■■□□□ 1.87
HDAC3-201ENST00000305264 PKMP14618 531 aaKnown RBP26.74■■□□□ 1.87
HDAC3-201ENST00000305264 GNPDA1P46926 289 aa26.74■■□□□ 1.87
HDAC3-201ENST00000305264 IFFO1Q0D2I5 559 aa26.74■■□□□ 1.87
HDAC3-201ENST00000305264 DUOXA1Q1HG43 343 aa26.74■■□□□ 1.87
HDAC3-201ENST00000305264 KIF19Q2TAC6 998 aa26.74■■□□□ 1.87
HDAC3-201ENST00000305264 BCL7AQ4VC05 210 aa26.74■■□□□ 1.87
HDAC3-201ENST00000305264 PTRHD1Q6GMV3 140 aaKnown RBP26.74■■□□□ 1.87
HDAC3-201ENST00000305264 LAIR1Q6GTX8 287 aa26.74■■□□□ 1.87
HDAC3-201ENST00000305264 HID1Q8IV36 788 aa26.74■■□□□ 1.87
HDAC3-201ENST00000305264 IQCKQ8N0W5 287 aa26.74■■□□□ 1.87
HDAC3-201ENST00000305264 KRT222Q8N1A0 295 aa26.74■■□□□ 1.87
HDAC3-201ENST00000305264 SKA1Q96BD8 255 aa26.74■■□□□ 1.87
HDAC3-201ENST00000305264 FAM136AQ96C01 138 aa26.74■■□□□ 1.87
HDAC3-201ENST00000305264 ZIM3Q96PE6 472 aa26.74■■□□□ 1.87
HDAC3-201ENST00000305264 AARSD1Q9BTE6 412 aaKnown RBP26.74■■□□□ 1.87
HDAC3-201ENST00000305264 ZNHIT2Q9UHR6 403 aa26.74■■□□□ 1.87
HDAC3-201ENST00000305264 MED16Q9Y2X0 877 aa26.74■■□□□ 1.87
HDAC3-201ENST00000305264 ADAMTS9Q9P2N4 1935 aa26.74■■□□□ 1.87
HDAC3-201ENST00000305264 ITGB6P18564 788 aa26.73■■□□□ 1.87
HDAC3-201ENST00000305264 BMPR2Q13873 1038 aa26.73■■□□□ 1.87
HDAC3-201ENST00000305264 PYCR3Q53H96 274 aa26.73■■□□□ 1.87
HDAC3-201ENST00000305264 C11orf96Q7Z7L8 435 aa26.73■■□□□ 1.87
HDAC3-201ENST00000305264 LRRTM4Q86VH4 590 aa26.73■■□□□ 1.87
HDAC3-201ENST00000305264 ZBTB9Q96C00 473 aa26.73■■□□□ 1.87
HDAC3-201ENST00000305264 CCDC68Q9H2F9 335 aa26.73■■□□□ 1.87
HDAC3-201ENST00000305264 TCEAL2Q9H3H9 227 aaPredicted RBP26.73■■□□□ 1.87
HDAC3-201ENST00000305264 SMOC1Q9H4F8 434 aa26.73■■□□□ 1.87
HDAC3-201ENST00000305264 SLC24A2Q9UI40 661 aa26.73■■□□□ 1.87
HDAC3-201ENST00000305264 MTO1Q9Y2Z2 717 aaKnown RBP26.73■■□□□ 1.87
HDAC3-201ENST00000305264 PCDHGA5Q9Y5G8 931 aa26.73■■□□□ 1.87
HDAC3-201ENST00000305264 SNX11Q9Y5W9 270 aa26.73■■□□□ 1.87
HDAC3-201ENST00000305264 TDRD6O60522 2096 aaKnown RBP26.73■■□□□ 1.87
HDAC3-201ENST00000305264 PCDH15Q96QU1 1955 aa26.73■■□□□ 1.87
HDAC3-201ENST00000305264 FAM95CA0A1B0GW59 222 aa26.73■■□□□ 1.87
HDAC3-201ENST00000305264 HMX2A2RU54 273 aa26.73■■□□□ 1.87
HDAC3-201ENST00000305264 ITGA2BP08514 1039 aa26.73■■□□□ 1.87
HDAC3-201ENST00000305264 OR56A5P0C7T3 313 aa26.73■■□□□ 1.87
HDAC3-201ENST00000305264 SPRP35270 261 aaPredicted RBP26.73■■□□□ 1.87
HDAC3-201ENST00000305264 GALNT13Q8IUC8 556 aa26.73■■□□□ 1.87
HDAC3-201ENST00000305264 SPNS2Q8IVW8 549 aa26.73■■□□□ 1.87
HDAC3-201ENST00000305264 ANKRD7Q92527 254 aa26.73■■□□□ 1.87
HDAC3-201ENST00000305264 ZNF514Q96K75 400 aaPredicted RBP26.73■■□□□ 1.87
HDAC3-201ENST00000305264 KCNH6Q9H252 994 aa26.73■■□□□ 1.87
HDAC3-201ENST00000305264 RMI1Q9H9A7 625 aa26.73■■□□□ 1.87
HDAC3-201ENST00000305264 DNAJC28Q9NX36 388 aa26.73■■□□□ 1.87
HDAC3-201ENST00000305264 ZNF180Q9UJW8 692 aa26.73■■□□□ 1.87
HDAC3-201ENST00000305264 CORO1CQ9ULV4 474 aaPredicted RBP26.73■■□□□ 1.87
HDAC3-201ENST00000305264 GPR34Q9UPC5 381 aa26.73■■□□□ 1.87
HDAC3-201ENST00000305264 CTSKP43235 329 aa26.72■■□□□ 1.87
HDAC3-201ENST00000305264 PGGT1BP53609 377 aa26.72■■□□□ 1.87
HDAC3-201ENST00000305264 PPARDQ03181 441 aa26.72■■□□□ 1.87
HDAC3-201ENST00000305264 TRIM61Q5EBN2 209 aa26.72■■□□□ 1.87
HDAC3-201ENST00000305264 PRAMEF14Q5SWL7 426 aa26.72■■□□□ 1.87
HDAC3-201ENST00000305264 ADGRD1Q6QNK2 874 aa26.72■■□□□ 1.87
HDAC3-201ENST00000305264 RABEPKQ7Z6M1 372 aa26.72■■□□□ 1.87
HDAC3-201ENST00000305264 CEP76Q8TAP6 659 aa26.72■■□□□ 1.87
HDAC3-201ENST00000305264 GPR22Q99680 433 aa26.72■■□□□ 1.87
HDAC3-201ENST00000305264 IRF2BPLQ9H1B7 796 aa26.72■■□□□ 1.87
HDAC3-201ENST00000305264 CAPN10Q9HC96 672 aa26.72■■□□□ 1.87
HDAC3-201ENST00000305264 PSMC3IPQ9P2W1 217 aaPredicted RBP26.72■■□□□ 1.87
HDAC3-201ENST00000305264 DGKBQ9Y6T7 804 aa26.72■■□□□ 1.87
HDAC3-201ENST00000305264 TCEA3O75764 348 aa26.71■■□□□ 1.87
HDAC3-201ENST00000305264 PBLDP30039 288 aaPredicted RBP26.71■■□□□ 1.87
HDAC3-201ENST00000305264 HK3P52790 923 aa26.71■■□□□ 1.87
HDAC3-201ENST00000305264 CDKN2DP55273 166 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms