RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 TCF12Q99081 682 aa24.15■■□□□ 1.46
HOXC9-201ENST00000303450 UCKL1Q9NWZ5 548 aa24.15■■□□□ 1.46
HOXC9-201ENST00000303450 NEMP2A6NFY4 417 aa24.14■■□□□ 1.45
HOXC9-201ENST00000303450 OR1I1O60431 355 aa24.14■■□□□ 1.45
HOXC9-201ENST00000303450 ILF3Q12906 894 aaKnown RBP eCLIP24.14■■□□□ 1.45
HOXC9-201ENST00000303450 SLC14A1Q13336 389 aa24.14■■□□□ 1.45
HOXC9-201ENST00000303450 LRP8Q14114 963 aa24.14■■□□□ 1.45
HOXC9-201ENST00000303450 TYSND1Q2T9J0 566 aa24.14■■□□□ 1.45
HOXC9-201ENST00000303450 RNF187Q5TA31 235 aaPredicted RBP24.14■■□□□ 1.45
HOXC9-201ENST00000303450 STPG1Q5TH74 334 aa24.14■■□□□ 1.45
HOXC9-201ENST00000303450 TRMT10BQ6PF06 316 aaKnown RBP24.14■■□□□ 1.45
HOXC9-201ENST00000303450 C3orf62Q6ZUJ4 267 aa24.14■■□□□ 1.45
HOXC9-201ENST00000303450 ZNF547Q8IVP9 402 aa24.14■■□□□ 1.45
HOXC9-201ENST00000303450 CLDN19Q8N6F1 224 aa24.14■■□□□ 1.45
HOXC9-201ENST00000303450 EIF1ADQ8N9N8 165 aaKnown RBP24.14■■□□□ 1.45
HOXC9-201ENST00000303450 DOLKQ9UPQ8 538 aa24.14■■□□□ 1.45
HOXC9-201ENST00000303450 PCDHGB2Q9Y5G2 931 aa24.14■■□□□ 1.45
HOXC9-201ENST00000303450 GSTA2P09210 222 aa24.13■■□□□ 1.45
HOXC9-201ENST00000303450 ACP5P13686 325 aa24.13■■□□□ 1.45
HOXC9-201ENST00000303450 CTBSQ01459 385 aa24.13■■□□□ 1.45
HOXC9-201ENST00000303450 CTBP1Q13363 440 aa24.13■■□□□ 1.45
HOXC9-201ENST00000303450 PLA2G4EQ3MJ16 856 aa24.13■■□□□ 1.45
HOXC9-201ENST00000303450 TAF8Q7Z7C8 310 aa24.13■■□□□ 1.45
HOXC9-201ENST00000303450 GKN2Q86XP6 184 aa24.13■■□□□ 1.45
HOXC9-201ENST00000303450 DENND6AQ8IWF6 608 aa24.13■■□□□ 1.45
HOXC9-201ENST00000303450 SLC25A45Q8N413 288 aa24.13■■□□□ 1.45
HOXC9-201ENST00000303450 CCL4L1Q8NHW4 92 aa24.13■■□□□ 1.45
HOXC9-201ENST00000303450 GSDMCQ9BYG8 508 aa24.13■■□□□ 1.45
HOXC9-201ENST00000303450 CLPBQ9H078 707 aa24.13■■□□□ 1.45
HOXC9-201ENST00000303450 LRRC4CQ9HCJ2 640 aa24.13■■□□□ 1.45
HOXC9-201ENST00000303450 VPS9D1Q9Y2B5 631 aa24.13■■□□□ 1.45
HOXC9-201ENST00000303450 PLEKHM1Q9Y4G2 1056 aa24.13■■□□□ 1.45
HOXC9-201ENST00000303450 CSNK1G3Q9Y6M4 447 aa24.13■■□□□ 1.45
HOXC9-201ENST00000303450 ASCC3Q8N3C0 2202 aaKnown RBP24.12■■□□□ 1.45
HOXC9-201ENST00000303450 AP2A2O94973 939 aa24.12■■□□□ 1.45
HOXC9-201ENST00000303450 CELA2BP08218 269 aaPredicted RBP24.12■■□□□ 1.45
HOXC9-201ENST00000303450 TNFRSF8P28908 595 aa24.12■■□□□ 1.45
HOXC9-201ENST00000303450 SLC1A2P43004 574 aa24.12■■□□□ 1.45
HOXC9-201ENST00000303450 SLMAPQ14BN4 828 aa24.12■■□□□ 1.45
HOXC9-201ENST00000303450 INSCQ1MX18 579 aa24.12■■□□□ 1.45
HOXC9-201ENST00000303450 ERCC6LQ2NKX8 1250 aa24.12■■□□□ 1.45
HOXC9-201ENST00000303450 RELL1Q8IUW5 271 aa24.12■■□□□ 1.45
HOXC9-201ENST00000303450 SDR16C5Q8N3Y7 309 aa24.12■■□□□ 1.45
HOXC9-201ENST00000303450 BEND7Q8N7W2 519 aaPredicted RBP24.12■■□□□ 1.45
HOXC9-201ENST00000303450 GPBAR1Q8TDU6 330 aa24.12■■□□□ 1.45
HOXC9-201ENST00000303450 SCG3Q8WXD2 468 aaKnown RBP24.12■■□□□ 1.45
HOXC9-201ENST00000303450 VPS37BQ9H9H4 285 aa24.12■■□□□ 1.45
HOXC9-201ENST00000303450 MOCS1Q9NZB8 636 aa24.12■■□□□ 1.45
HOXC9-201ENST00000303450 FBXO5Q9UKT4 447 aa24.12■■□□□ 1.45
HOXC9-201ENST00000303450 PIKFYVEQ9Y2I7 2098 aa24.11■■□□□ 1.45
HOXC9-201ENST00000303450 UBA6A0AVT1 1052 aaPredicted RBP24.11■■□□□ 1.45
HOXC9-201ENST00000303450 QSOX1O00391 747 aa24.11■■□□□ 1.45
HOXC9-201ENST00000303450 PRMT5O14744 637 aaPredicted RBP24.11■■□□□ 1.45
HOXC9-201ENST00000303450 GPX6P59796 221 aa24.11■■□□□ 1.45
HOXC9-201ENST00000303450 MGAT5Q09328 741 aa24.11■■□□□ 1.45
HOXC9-201ENST00000303450 KYNUQ16719 465 aa24.11■■□□□ 1.45
HOXC9-201ENST00000303450 BCL7AQ4VC05 210 aa24.11■■□□□ 1.45
HOXC9-201ENST00000303450 KANSL1Q7Z3B3 1105 aa24.11■■□□□ 1.45
HOXC9-201ENST00000303450 ALYREFQ86V81 257 aaKnown RBP24.11■■□□□ 1.45
HOXC9-201ENST00000303450 INTS10Q9NVR2 710 aaKnown RBP24.11■■□□□ 1.45
HOXC9-201ENST00000303450 ZFATQ9P243 1243 aa24.11■■□□□ 1.45
HOXC9-201ENST00000303450 DNMT3AQ9Y6K1 912 aaPredicted RBP24.11■■□□□ 1.45
HOXC9-201ENST00000303450 PRSS21Q9Y6M0 314 aa24.11■■□□□ 1.45
HOXC9-201ENST00000303450 LMO7DNF2Z398 122 aa24.1■■□□□ 1.45
HOXC9-201ENST00000303450 F8W8V4 182 aa24.1■■□□□ 1.45
HOXC9-201ENST00000303450 FFAR2O15552 330 aa24.1■■□□□ 1.45
HOXC9-201ENST00000303450 SGTAO43765 313 aa24.1■■□□□ 1.45
HOXC9-201ENST00000303450 SPAG6O75602 509 aa24.1■■□□□ 1.45
HOXC9-201ENST00000303450 POP7O75817 140 aaKnown RBP24.1■■□□□ 1.45
HOXC9-201ENST00000303450 ANXA6P08133 673 aa24.1■■□□□ 1.45
HOXC9-201ENST00000303450 OR56A5P0C7T3 313 aa24.1■■□□□ 1.45
HOXC9-201ENST00000303450 VCLP18206 1134 aa24.1■■□□□ 1.45
HOXC9-201ENST00000303450 AK4P27144 223 aaPredicted RBP24.1■■□□□ 1.45
HOXC9-201ENST00000303450 PRLHRP49683 370 aa24.1■■□□□ 1.45
HOXC9-201ENST00000303450 LIMK1P53667 647 aa24.1■■□□□ 1.45
HOXC9-201ENST00000303450 ARHGAP8P85298 464 aa24.1■■□□□ 1.45
HOXC9-201ENST00000303450 INAVAQ3KP66 663 aa24.1■■□□□ 1.45
HOXC9-201ENST00000303450 SLC30A9Q6PML9 568 aa24.1■■□□□ 1.45
HOXC9-201ENST00000303450 C11orf96Q7Z7L8 435 aa24.1■■□□□ 1.45
HOXC9-201ENST00000303450 AMZ2Q86W34 360 aa24.1■■□□□ 1.45
HOXC9-201ENST00000303450 CNTN4Q8IWV2 1026 aa24.1■■□□□ 1.45
HOXC9-201ENST00000303450 GSPT2Q8IYD1 628 aaKnown RBP24.1■■□□□ 1.45
HOXC9-201ENST00000303450 TIMM29Q9BSF4 260 aa24.1■■□□□ 1.45
HOXC9-201ENST00000303450 CDC42EP4Q9H3Q1 356 aaKnown RBP24.1■■□□□ 1.45
HOXC9-201ENST00000303450 FBXO6Q9NRD1 293 aaPredicted RBP24.1■■□□□ 1.45
HOXC9-201ENST00000303450 KLC4Q9NSK0 619 aa24.1■■□□□ 1.45
HOXC9-201ENST00000303450 SLC23A2Q9UGH3 650 aa24.1■■□□□ 1.45
HOXC9-201ENST00000303450 KCNK6Q9Y257 313 aa24.1■■□□□ 1.45
HOXC9-201ENST00000303450 CRYL1Q9Y2S2 319 aa24.1■■□□□ 1.45
HOXC9-201ENST00000303450 TCRBV9S1A1TA0A576 114 aa24.1■■□□□ 1.45
HOXC9-201ENST00000303450 YY2O15391 372 aa24.1■■□□□ 1.45
HOXC9-201ENST00000303450 S1PR4O95977 384 aa24.1■■□□□ 1.45
HOXC9-201ENST00000303450 ACTR1BP42025 376 aa24.1■■□□□ 1.45
HOXC9-201ENST00000303450 EIF3BP55884 814 aaKnown RBP24.1■■□□□ 1.45
HOXC9-201ENST00000303450 ACTR1AP61163 376 aa24.1■■□□□ 1.45
HOXC9-201ENST00000303450 MPP1Q00013 466 aa24.1■■□□□ 1.45
HOXC9-201ENST00000303450 DEFB133Q30KQ1 61 aa24.1■■□□□ 1.45
HOXC9-201ENST00000303450 TEDDM1Q5T9Z0 273 aa24.1■■□□□ 1.45
HOXC9-201ENST00000303450 CCNI2Q6ZMN8 369 aaPredicted RBP24.1■■□□□ 1.45
HOXC9-201ENST00000303450 LRRC6Q86X45 466 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms