RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 F3P13726 295 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 PNLIPP16233 465 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 ZNF7P17097 686 aaPredicted RBP9.63□□□□□ -0.87
CCDC58-201ENST00000291458 TPH1P17752 444 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 SLC5A2P31639 672 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 CCKBRP32239 447 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 HMGCLP35914 325 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 CTSCP53634 463 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 TERF1P54274 439 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 TLE3Q04726 772 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 SRSF6Q13247 344 aaKnown RBP9.63□□□□□ -0.87
CCDC58-201ENST00000291458 PEX6Q13608 980 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 GPRC6AQ5T6X5 926 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 ARHGAP40Q5TG30 622 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 BROXQ5VW32 411 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 ZNF438Q7Z4V0 828 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 SLC9B2Q86UD5 537 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 NLRP8Q86W28 1048 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 C17orf82Q86X59 251 aaPredicted RBP9.63□□□□□ -0.87
CCDC58-201ENST00000291458 SLITRK4Q8IW52 837 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 SFRP1Q8N474 314 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 BEND7Q8N7W2 519 aaPredicted RBP9.63□□□□□ -0.87
CCDC58-201ENST00000291458 C1orf54Q8WWF1 131 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 NCSTNQ92542 709 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 PMEPA1Q969W9 287 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 SLC46A1Q96NT5 459 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 TRABDQ9H4I3 376 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 RMI1Q9H9A7 625 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 TRIM39Q9HCM9 518 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.63□□□□□ -0.87
CCDC58-201ENST00000291458 FOXJ2Q9P0K8 574 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 IL17CQ9P0M4 197 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 SCHIP1Q9P0W5 487 aaPredicted RBP9.63□□□□□ -0.87
CCDC58-201ENST00000291458 NFKBIL1Q9UBC1 381 aaPredicted RBP9.63□□□□□ -0.87
CCDC58-201ENST00000291458 CRLS1Q9UJA2 301 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 PSMD13Q9UNM6 376 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 EFR3BQ9Y2G0 817 aa9.63□□□□□ -0.87
CCDC58-201ENST00000291458 IGHV5-10-1A0A0J9YXX1 117 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 FAM187AA6NFU0 413 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 OR52A4PA6NMU1 304 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 EFCAB7A8K855 629 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 GAPDHSO14556 408 aaPredicted RBP9.62□□□□□ -0.87
CCDC58-201ENST00000291458 KMOO15229 486 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 ARHGAP6O43182 974 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 METTL18O95568 372 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 VIPP01282 170 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 ITGA2BP08514 1039 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 PRSS56P0CW18 603 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 CCL4P13236 92 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 SLC2A4P14672 509 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 TYRP1P17643 537 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 MSH3P20585 1137 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 LPOP22079 712 aaPredicted RBP9.62□□□□□ -0.87
CCDC58-201ENST00000291458 CD1CP29017 333 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 LMAN1P49257 510 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 ERVPABLB-1P60509 514 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 CFHR1Q03591 330 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 TMEM115Q12893 351 aaPredicted RBP9.62□□□□□ -0.87
CCDC58-201ENST00000291458 ITGA9Q13797 1035 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 POU6F1Q14863 301 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 TAF1AQ15573 450 aaPredicted RBP9.62□□□□□ -0.87
CCDC58-201ENST00000291458 TGIF1Q15583 401 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 ZRANB3Q5FWF4 1079 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 FNBP1LQ5T0N5 605 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 PDPK2PQ6A1A2 396 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 DUS1LQ6P1R4 473 aaKnown RBP9.62□□□□□ -0.87
CCDC58-201ENST00000291458 IYDQ6PHW0 289 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 ZNF574Q6ZN55 896 aaPredicted RBP9.62□□□□□ -0.87
CCDC58-201ENST00000291458 VASH2Q86V25 355 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 ZFAND4Q86XD8 727 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 ZNF547Q8IVP9 402 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 RAVER1Q8IY67 606 aaKnown RBP9.62□□□□□ -0.87
CCDC58-201ENST00000291458 RASGEF1AQ8N9B8 481 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 CCDC112Q8NEF3 446 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 OR10G6Q8NH81 332 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 USP7Q93009 1102 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 CXorf40BQ96DE9 158 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 HES6Q96HZ4 224 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 DNAJC1Q96KC8 554 aaKnown RBP9.62□□□□□ -0.87
CCDC58-201ENST00000291458 ALS2CR12Q96Q35 445 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 SRPK1Q96SB4 655 aaKnown RBP9.62□□□□□ -0.87
CCDC58-201ENST00000291458 CMKLR1Q99788 373 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 ZCCHC2Q9C0B9 1178 aaKnown RBP9.62□□□□□ -0.87
CCDC58-201ENST00000291458 AKAP7Q9P0M2 348 aaPredicted RBP9.62□□□□□ -0.87
CCDC58-201ENST00000291458 AAR2Q9Y312 384 aaKnown RBP9.62□□□□□ -0.87
CCDC58-201ENST00000291458 PCDHGA8Q9Y5G5 932 aa9.62□□□□□ -0.87
CCDC58-201ENST00000291458 CFAP20Q9Y6A4 193 aaKnown RBP9.62□□□□□ -0.87
CCDC58-201ENST00000291458 SDK2Q58EX2 2172 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 ANKRD11Q6UB99 2663 aaPredicted RBP9.61□□□□□ -0.87
CCDC58-201ENST00000291458 A6NCN8 305 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 C2orf81A6NN90 581 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 CDRT15L2A8MXV6 281 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 TMX2-CTNND1H3BSU7 103 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 J3QL48 77 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 ZW10O43264 779 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 VEGFDO43915 354 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 EPOP01588 193 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 CCDC175P0C221 793 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 FBXO45P0C2W1 286 aa9.61□□□□□ -0.87
CCDC58-201ENST00000291458 THRAP10827 490 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms