RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 FNBP1LQ5T0N5 605 aa26.49■■□□□ 1.83
SSU72-201ENST00000291386 N4BP2L1Q5TBK1 243 aaPredicted RBP26.49■■□□□ 1.83
SSU72-201ENST00000291386 CES3Q6UWW8 571 aa26.49■■□□□ 1.83
SSU72-201ENST00000291386 PDIK1LQ8N165 341 aa26.49■■□□□ 1.83
SSU72-201ENST00000291386 OR6C4Q8NGE1 309 aa26.49■■□□□ 1.83
SSU72-201ENST00000291386 SGF29Q96ES7 293 aa26.49■■□□□ 1.83
SSU72-201ENST00000291386 CCDC97Q96F63 343 aaPredicted RBP26.49■■□□□ 1.83
SSU72-201ENST00000291386 KLC4Q9NSK0 619 aa26.49■■□□□ 1.83
SSU72-201ENST00000291386 CATSPERZQ9NTU4 200 aa26.49■■□□□ 1.83
SSU72-201ENST00000291386 PADI4Q9UM07 663 aa26.49■■□□□ 1.83
SSU72-201ENST00000291386 KCNK6Q9Y257 313 aa26.49■■□□□ 1.83
SSU72-201ENST00000291386 UTP11Q9Y3A2 253 aaKnown RBP26.49■■□□□ 1.83
SSU72-201ENST00000291386 CACNA1AO00555 2505 aa26.49■■□□□ 1.83
SSU72-201ENST00000291386 OR2AG2A6NM03 316 aa26.48■■□□□ 1.83
SSU72-201ENST00000291386 RFPL3O75679 317 aa26.48■■□□□ 1.83
SSU72-201ENST00000291386 VCLP18206 1134 aa26.48■■□□□ 1.83
SSU72-201ENST00000291386 PPARGP37231 505 aaPredicted RBP26.48■■□□□ 1.83
SSU72-201ENST00000291386 NSG1P42857 185 aa26.48■■□□□ 1.83
SSU72-201ENST00000291386 PRLHRP49683 370 aa26.48■■□□□ 1.83
SSU72-201ENST00000291386 DHX9Q08211 1270 aaKnown RBP26.48■■□□□ 1.83
SSU72-201ENST00000291386 HLTFQ14527 1009 aaKnown RBP eCLIP26.48■■□□□ 1.83
SSU72-201ENST00000291386 NAGSQ8N159 534 aa26.48■■□□□ 1.83
SSU72-201ENST00000291386 KYQ8NBH2 561 aa26.48■■□□□ 1.83
SSU72-201ENST00000291386 STAMBPL1Q96FJ0 436 aa26.48■■□□□ 1.83
SSU72-201ENST00000291386 NAT9Q9BTE0 207 aa26.48■■□□□ 1.83
SSU72-201ENST00000291386 SIRPGQ9P1W8 387 aa26.48■■□□□ 1.83
SSU72-201ENST00000291386 GULP1Q9UBP9 304 aa26.48■■□□□ 1.83
SSU72-201ENST00000291386 RPS6KL1Q9Y6S9 549 aa26.48■■□□□ 1.83
SSU72-201ENST00000291386 ZCWPW2A0A1B0GU75 182 aa26.47■■□□□ 1.83
SSU72-201ENST00000291386 CTAGE15A4D2H0 777 aa26.47■■□□□ 1.83
SSU72-201ENST00000291386 A6NCN8 305 aa26.47■■□□□ 1.83
SSU72-201ENST00000291386 B4DGG1 531 aa26.47■■□□□ 1.83
SSU72-201ENST00000291386 CD3EAPO15446 510 aaKnown RBP26.47■■□□□ 1.83
SSU72-201ENST00000291386 POP7O75817 140 aaKnown RBP26.47■■□□□ 1.83
SSU72-201ENST00000291386 AP2A2O94973 939 aa26.47■■□□□ 1.83
SSU72-201ENST00000291386 VAPBO95292 243 aa26.47■■□□□ 1.83
SSU72-201ENST00000291386 TRIM16O95361 564 aa26.47■■□□□ 1.83
SSU72-201ENST00000291386 CTAGE8P0CG41 777 aa26.47■■□□□ 1.83
SSU72-201ENST00000291386 MYF5P13349 255 aa26.47■■□□□ 1.83
SSU72-201ENST00000291386 KCNA4P22459 653 aa26.47■■□□□ 1.83
SSU72-201ENST00000291386 DRG2P55039 364 aaKnown RBP26.47■■□□□ 1.83
SSU72-201ENST00000291386 CALCOCO2Q13137 446 aa26.47■■□□□ 1.83
SSU72-201ENST00000291386 SEMA3AQ14563 771 aa26.47■■□□□ 1.83
SSU72-201ENST00000291386 MSS51Q4VC12 460 aa26.47■■□□□ 1.83
SSU72-201ENST00000291386 C14orf28Q4W4Y0 310 aa26.47■■□□□ 1.83
SSU72-201ENST00000291386 C8orf74Q6P047 294 aa26.47■■□□□ 1.83
SSU72-201ENST00000291386 CTAGE6Q86UF2 777 aa26.47■■□□□ 1.83
SSU72-201ENST00000291386 AMZ2Q86W34 360 aa26.47■■□□□ 1.83
SSU72-201ENST00000291386 CTAGE4Q8IX94 777 aa26.47■■□□□ 1.83
SSU72-201ENST00000291386 GPR150Q8NGU9 434 aa26.47■■□□□ 1.83
SSU72-201ENST00000291386 ADAMTS14Q8WXS8 1223 aa26.47■■□□□ 1.83
SSU72-201ENST00000291386 NAT6Q93015 286 aa26.47■■□□□ 1.83
SSU72-201ENST00000291386 ZNF669Q96BR6 464 aaPredicted RBP26.47■■□□□ 1.83
SSU72-201ENST00000291386 LRRC39Q96DD0 335 aa26.47■■□□□ 1.83
SSU72-201ENST00000291386 FCRL3Q96P31 734 aaPredicted RBP26.47■■□□□ 1.83
SSU72-201ENST00000291386 EBNA1BP2Q99848 306 aaKnown RBP26.47■■□□□ 1.83
SSU72-201ENST00000291386 TBC1D29Q9UFV1 150 aa26.47■■□□□ 1.83
SSU72-201ENST00000291386 PGAM1P18669 254 aa26.46■■□□□ 1.83
SSU72-201ENST00000291386 ARL4CP56559 192 aa26.46■■□□□ 1.83
SSU72-201ENST00000291386 HIF1AQ16665 826 aa26.46■■□□□ 1.83
SSU72-201ENST00000291386 PLA2G4EQ3MJ16 856 aa26.46■■□□□ 1.83
SSU72-201ENST00000291386 WASH2PQ6VEQ5 465 aa26.46■■□□□ 1.83
SSU72-201ENST00000291386 DET1Q7L5Y6 550 aa26.46■■□□□ 1.83
SSU72-201ENST00000291386 CCNJLQ8IV13 435 aa26.46■■□□□ 1.83
SSU72-201ENST00000291386 CEP112Q8N8E3 955 aa26.46■■□□□ 1.83
SSU72-201ENST00000291386 TRIM56Q9BRZ2 755 aaKnown RBP26.46■■□□□ 1.83
SSU72-201ENST00000291386 LRRC1Q9BTT6 524 aa26.46■■□□□ 1.83
SSU72-201ENST00000291386 DPH5Q9H2P9 285 aa26.46■■□□□ 1.83
SSU72-201ENST00000291386 WASH6PQ9NQA3 447 aa26.46■■□□□ 1.83
SSU72-201ENST00000291386 GRHL1Q9NZI5 618 aa26.46■■□□□ 1.83
SSU72-201ENST00000291386 MAD1L1Q9Y6D9 718 aa26.46■■□□□ 1.83
SSU72-201ENST00000291386 FAM169AQ9Y6X4 670 aa26.46■■□□□ 1.83
SSU72-201ENST00000291386 PIKFYVEQ9Y2I7 2098 aa26.46■■□□□ 1.83
SSU72-201ENST00000291386 C17orf113A0A1B0GUU1 675 aa26.45■■□□□ 1.82
SSU72-201ENST00000291386 MGAT4DA6NG13 374 aa26.45■■□□□ 1.82
SSU72-201ENST00000291386 OR5K4A6NMS3 321 aa26.45■■□□□ 1.82
SSU72-201ENST00000291386 QSOX1O00391 747 aa26.45■■□□□ 1.82
SSU72-201ENST00000291386 TTC4O95801 387 aa26.45■■□□□ 1.82
SSU72-201ENST00000291386 POLBP06746 335 aa26.45■■□□□ 1.82
SSU72-201ENST00000291386 GSTM1P09488 218 aa26.45■■□□□ 1.82
SSU72-201ENST00000291386 F3P13726 295 aa26.45■■□□□ 1.82
SSU72-201ENST00000291386 SLC2A4P14672 509 aa26.45■■□□□ 1.82
SSU72-201ENST00000291386 PNLIPP16233 465 aa26.45■■□□□ 1.82
SSU72-201ENST00000291386 TTPAP49638 278 aa26.45■■□□□ 1.82
SSU72-201ENST00000291386 GSTM4Q03013 218 aa26.45■■□□□ 1.82
SSU72-201ENST00000291386 GUSBP11Q6P575 273 aa26.45■■□□□ 1.82
SSU72-201ENST00000291386 SFTPA2Q8IWL1 248 aa26.45■■□□□ 1.82
SSU72-201ENST00000291386 SFRP1Q8N474 314 aa26.45■■□□□ 1.82
SSU72-201ENST00000291386 OR2L2Q8NH16 312 aa26.45■■□□□ 1.82
SSU72-201ENST00000291386 IFI44Q8TCB0 444 aa26.45■■□□□ 1.82
SSU72-201ENST00000291386 MARCH4Q9P2E8 410 aaPredicted RBP26.45■■□□□ 1.82
SSU72-201ENST00000291386 E7ESA3 106 aa26.44■■□□□ 1.82
SSU72-201ENST00000291386 NUDT21O43809 227 aaKnown RBP26.44■■□□□ 1.82
SSU72-201ENST00000291386 EML2O95834 649 aa26.44■■□□□ 1.82
SSU72-201ENST00000291386 GLB1P16278 677 aa26.44■■□□□ 1.82
SSU72-201ENST00000291386 IDSP22304 550 aa26.44■■□□□ 1.82
SSU72-201ENST00000291386 E2F1Q01094 437 aa26.44■■□□□ 1.82
SSU72-201ENST00000291386 CAV1Q03135 178 aa26.44■■□□□ 1.82
SSU72-201ENST00000291386 BBS9Q3SYG4 887 aa26.44■■□□□ 1.82
SSU72-201ENST00000291386 AGAP9Q5VTM2 703 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms