RNA–Protein interactions for RNA: ENST00000290541.6

PSMB4-201, Transcript of proteasome subunit beta 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMB4, Length 964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-201ENST00000290541 POLD2P49005 469 aa13.18□□□□□ -0.3
PSMB4-201ENST00000290541 NXPH1P58417 271 aa13.18□□□□□ -0.3
PSMB4-201ENST00000290541 CDK3Q00526 305 aa13.18□□□□□ -0.3
PSMB4-201ENST00000290541 PDE1BQ01064 536 aa13.18□□□□□ -0.3
PSMB4-201ENST00000290541 ACVR1Q04771 509 aa13.18□□□□□ -0.3
PSMB4-201ENST00000290541 CALCOCO2Q13137 446 aa13.18□□□□□ -0.3
PSMB4-201ENST00000290541 PDE1CQ14123 709 aaPredicted RBP13.18□□□□□ -0.3
PSMB4-201ENST00000290541 FASTKD3Q14CZ7 662 aaKnown RBP13.18□□□□□ -0.3
PSMB4-201ENST00000290541 GLE1Q53GS7 698 aaKnown RBP13.18□□□□□ -0.3
PSMB4-201ENST00000290541 ZNF542PQ5EBM4 170 aa13.18□□□□□ -0.3
PSMB4-201ENST00000290541 TEX35Q5T0J7 233 aa13.18□□□□□ -0.3
PSMB4-201ENST00000290541 CASC4Q6P4E1 433 aa13.18□□□□□ -0.3
PSMB4-201ENST00000290541 ADAMTSL4Q6UY14 1074 aa13.18□□□□□ -0.3
PSMB4-201ENST00000290541 BBOF1Q8ND07 529 aa13.18□□□□□ -0.3
PSMB4-201ENST00000290541 FBXO25Q8TCJ0 367 aa13.18□□□□□ -0.3
PSMB4-201ENST00000290541 HDAC10Q969S8 669 aa13.18□□□□□ -0.3
PSMB4-201ENST00000290541 CCDC97Q96F63 343 aaPredicted RBP13.18□□□□□ -0.3
PSMB4-201ENST00000290541 COX14Q96I36 57 aa13.18□□□□□ -0.3
PSMB4-201ENST00000290541 PLEKHG4BQ96PX9 1271 aa13.18□□□□□ -0.3
PSMB4-201ENST00000290541 TEX101Q9BY14 249 aa13.18□□□□□ -0.3
PSMB4-201ENST00000290541 ZNF768Q9H5H4 540 aaKnown RBP13.18□□□□□ -0.3
PSMB4-201ENST00000290541 PLAC1Q9HBJ0 212 aa13.18□□□□□ -0.3
PSMB4-201ENST00000290541 RAD18Q9NS91 495 aa13.18□□□□□ -0.3
PSMB4-201ENST00000290541 TREX1Q9NSU2 369 aa13.18□□□□□ -0.3
PSMB4-201ENST00000290541 ZDHHC18Q9NUE0 388 aa13.18□□□□□ -0.3
PSMB4-201ENST00000290541 KCTD5Q9NXV2 234 aa13.18□□□□□ -0.3
PSMB4-201ENST00000290541 FTSJ1Q9UET6 329 aa13.18□□□□□ -0.3
PSMB4-201ENST00000290541 PLEKHB1Q9UF11 243 aaPredicted RBP13.18□□□□□ -0.3
PSMB4-201ENST00000290541 KLF15Q9UIH9 416 aa13.18□□□□□ -0.3
PSMB4-201ENST00000290541 TMEM98Q9Y2Y6 226 aa13.18□□□□□ -0.3
PSMB4-201ENST00000290541 MAD1L1Q9Y6D9 718 aa13.18□□□□□ -0.3
PSMB4-201ENST00000290541 AP3B1O00203 1094 aa13.17□□□□□ -0.3
PSMB4-201ENST00000290541 SCAMP1O15126 338 aa13.17□□□□□ -0.3
PSMB4-201ENST00000290541 KLK10O43240 276 aa13.17□□□□□ -0.3
PSMB4-201ENST00000290541 PPFIA2O75334 1257 aa13.17□□□□□ -0.3
PSMB4-201ENST00000290541 RFPL3O75679 317 aa13.17□□□□□ -0.3
PSMB4-201ENST00000290541 SRP72O76094 671 aaKnown RBP13.17□□□□□ -0.3
PSMB4-201ENST00000290541 PRAMEF1O95521 474 aa13.17□□□□□ -0.3
PSMB4-201ENST00000290541 FUCA1P04066 466 aa13.17□□□□□ -0.3
PSMB4-201ENST00000290541 ARNTP27540 789 aa13.17□□□□□ -0.3
PSMB4-201ENST00000290541 TEAD1P28347 426 aa13.17□□□□□ -0.3
PSMB4-201ENST00000290541 ECHS1P30084 290 aa13.17□□□□□ -0.3
PSMB4-201ENST00000290541 ELK3P41970 407 aa13.17□□□□□ -0.3
PSMB4-201ENST00000290541 CARSP49589 748 aaKnown RBP13.17□□□□□ -0.3
PSMB4-201ENST00000290541 C21orf59P57076 290 aa13.17□□□□□ -0.3
PSMB4-201ENST00000290541 EIF2B5Q13144 721 aaKnown RBP13.17□□□□□ -0.3
PSMB4-201ENST00000290541 FZD2Q14332 565 aa13.17□□□□□ -0.3
PSMB4-201ENST00000290541 NFATC4Q14934 902 aa13.17□□□□□ -0.3
PSMB4-201ENST00000290541 TEAD4Q15561 434 aa13.17□□□□□ -0.3
PSMB4-201ENST00000290541 SKIDA1Q1XH10 827 aa13.17□□□□□ -0.3
PSMB4-201ENST00000290541 LINC00303Q3SY05 128 aa13.17□□□□□ -0.3
PSMB4-201ENST00000290541 KHDC1Q4VXA5 237 aaKnown RBP13.17□□□□□ -0.3
PSMB4-201ENST00000290541 DOK6Q6PKX4 331 aa13.17□□□□□ -0.3
PSMB4-201ENST00000290541 IQCHQ86VS3 1027 aa13.17□□□□□ -0.3
PSMB4-201ENST00000290541 ANKMY2Q8IV38 441 aa13.17□□□□□ -0.3
PSMB4-201ENST00000290541 PIANPQ8IYJ0 282 aa13.17□□□□□ -0.3
PSMB4-201ENST00000290541 ZNF398Q8TD17 642 aa13.17□□□□□ -0.3
PSMB4-201ENST00000290541 NAT14Q8WUY8 206 aa13.17□□□□□ -0.3
PSMB4-201ENST00000290541 KCNE4Q8WWG9 221 aa13.17□□□□□ -0.3
PSMB4-201ENST00000290541 IFT81Q8WYA0 676 aa13.17□□□□□ -0.3
PSMB4-201ENST00000290541 ZNF578Q96N58 590 aaPredicted RBP13.17□□□□□ -0.3
PSMB4-201ENST00000290541 ZSCAN5AQ9BUG6 496 aa13.17□□□□□ -0.3
PSMB4-201ENST00000290541 WDR26Q9H7D7 661 aa13.17□□□□□ -0.3
PSMB4-201ENST00000290541 MRM3Q9HC36 420 aaKnown RBP13.17□□□□□ -0.3
PSMB4-201ENST00000290541 GDF3Q9NR23 364 aa13.17□□□□□ -0.3
PSMB4-201ENST00000290541 IL1RAPL1Q9NZN1 696 aa13.17□□□□□ -0.3
PSMB4-201ENST00000290541 RIMKLBQ9ULI2 386 aa13.17□□□□□ -0.3
PSMB4-201ENST00000290541 PCYT1BQ9Y5K3 369 aaPredicted RBP13.17□□□□□ -0.3
PSMB4-201ENST00000290541 TEX264Q9Y6I9 313 aa13.17□□□□□ -0.3
PSMB4-201ENST00000290541 TDRD6O60522 2096 aaKnown RBP13.17□□□□□ -0.3
PSMB4-201ENST00000290541 GOLGA8KD6RF30 607 aa13.16□□□□□ -0.3
PSMB4-201ENST00000290541 E7ESA3 106 aa13.16□□□□□ -0.3
PSMB4-201ENST00000290541 GOLGA8TH3BQL2 631 aa13.16□□□□□ -0.3
PSMB4-201ENST00000290541 H7C0S8 307 aa13.16□□□□□ -0.3
PSMB4-201ENST00000290541 SMAPO00193 183 aa13.16□□□□□ -0.3
PSMB4-201ENST00000290541 PCDHGA12O60330 932 aa13.16□□□□□ -0.3
PSMB4-201ENST00000290541 MTX2O75431 263 aa13.16□□□□□ -0.3
PSMB4-201ENST00000290541 SLU7O95391 586 aaKnown RBP13.16□□□□□ -0.3
PSMB4-201ENST00000290541 GOT2P00505 430 aaKnown RBP13.16□□□□□ -0.3
PSMB4-201ENST00000290541 F7P08709 466 aaPredicted RBP13.16□□□□□ -0.3
PSMB4-201ENST00000290541 HOXC4P09017 264 aaPredicted RBP13.16□□□□□ -0.3
PSMB4-201ENST00000290541 CDK4P11802 303 aa13.16□□□□□ -0.3
PSMB4-201ENST00000290541 MYCLP1P12525 358 aaPredicted RBP13.16□□□□□ -0.3
PSMB4-201ENST00000290541 FOXN2P32314 431 aa13.16□□□□□ -0.3
PSMB4-201ENST00000290541 HADHAP40939 763 aa13.16□□□□□ -0.3
PSMB4-201ENST00000290541 ARL4CP56559 192 aa13.16□□□□□ -0.3
PSMB4-201ENST00000290541 KIAA1024LP59773 190 aa13.16□□□□□ -0.3
PSMB4-201ENST00000290541 YPEL5P62699 121 aa13.16□□□□□ -0.3
PSMB4-201ENST00000290541 PDIA2Q13087 525 aaKnown RBP13.16□□□□□ -0.3
PSMB4-201ENST00000290541 SEMA3AQ14563 771 aa13.16□□□□□ -0.3
PSMB4-201ENST00000290541 SHBQ15464 509 aa13.16□□□□□ -0.3
PSMB4-201ENST00000290541 HIF1AQ16665 826 aa13.16□□□□□ -0.3
PSMB4-201ENST00000290541 ANKRD20A4Q4UJ75 823 aa13.16□□□□□ -0.3
PSMB4-201ENST00000290541 DNAJC21Q5F1R6 531 aaKnown RBP13.16□□□□□ -0.3
PSMB4-201ENST00000290541 ENPP7Q6UWV6 458 aa13.16□□□□□ -0.3
PSMB4-201ENST00000290541 NLRP9Q7RTR0 991 aa13.16□□□□□ -0.3
PSMB4-201ENST00000290541 UNC5BQ8IZJ1 945 aa13.16□□□□□ -0.3
PSMB4-201ENST00000290541 PDIK1LQ8N165 341 aa13.16□□□□□ -0.3
PSMB4-201ENST00000290541 BTN2A2Q8WVV5 523 aa13.16□□□□□ -0.3
PSMB4-201ENST00000290541 OR1E3Q8WZA6 343 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms