RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 UBR7Q8N806 425 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 SIPA1Q96FS4 1042 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 KLHL5Q96PQ7 755 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 ASB2Q96Q27 587 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 PRDM12Q9H4Q4 367 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 ACTR8Q9H981 624 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 C8orf4Q9NR00 106 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 SLC9A8Q9Y2E8 581 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 MRPS7Q9Y2R9 242 aaKnown RBP11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 G3V2T6 193 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 MSI1O43347 362 aaKnown RBP11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 SSNA1O43805 119 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 TCEA3O75764 348 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 IFI30P13284 250 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 RHOQP17081 205 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 IDH3AP50213 366 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 RPS7P62081 194 aaKnown RBP11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 PHKG1Q16816 387 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 PFKFB4Q16877 469 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 ANKRD22Q5VYY1 191 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 PRR23CQ6ZRP0 262 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 PSTKQ8IV42 348 aaKnown RBP11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 OTUB2Q96DC9 234 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 CENPNQ96H22 339 aaPredicted RBP11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 RNF157Q96PX1 679 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 YIPF2Q9BWQ6 316 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 BCO2Q9BYV7 579 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 CAB39LQ9H9S4 337 aa11.28□□□□□ -0.6
NPC1L1-201ENST00000289547 H0Y858 1186 aa11.27□□□□□ -0.6
NPC1L1-201ENST00000289547 ITM2AO43736 263 aa11.27□□□□□ -0.6
NPC1L1-201ENST00000289547 SEC22BO75396 215 aa11.27□□□□□ -0.6
NPC1L1-201ENST00000289547 IFNA14P01570 189 aa11.27□□□□□ -0.6
NPC1L1-201ENST00000289547 C2P06681 752 aa11.27□□□□□ -0.6
NPC1L1-201ENST00000289547 THRBP10828 461 aa11.27□□□□□ -0.6
NPC1L1-201ENST00000289547 FEN1P39748 380 aaKnown RBP11.27□□□□□ -0.6
NPC1L1-201ENST00000289547 MAPKAPK2P49137 400 aa11.27□□□□□ -0.6
NPC1L1-201ENST00000289547 RAB25P57735 213 aa11.27□□□□□ -0.6
NPC1L1-201ENST00000289547 DEFB103AP81534 67 aa11.27□□□□□ -0.6
NPC1L1-201ENST00000289547 SIM2Q14190 667 aaPredicted RBP11.27□□□□□ -0.6
NPC1L1-201ENST00000289547 MED22Q15528 200 aa11.27□□□□□ -0.6
NPC1L1-201ENST00000289547 RNASEH2BQ5TBB1 312 aaKnown RBP11.27□□□□□ -0.6
NPC1L1-201ENST00000289547 SMYD5Q6GMV2 418 aa11.27□□□□□ -0.6
NPC1L1-201ENST00000289547 GLT6D1Q7Z4J2 308 aa11.27□□□□□ -0.6
NPC1L1-201ENST00000289547 CNTD1Q8N815 330 aa11.27□□□□□ -0.6
NPC1L1-201ENST00000289547 OR56A4Q8NGH8 313 aa11.27□□□□□ -0.6
NPC1L1-201ENST00000289547 ZNF576Q9H609 170 aa11.27□□□□□ -0.6
NPC1L1-201ENST00000289547 DOCK2Q92608 1830 aa11.27□□□□□ -0.6
NPC1L1-201ENST00000289547 TBC1D3DA0A087WVF3 549 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 TBC1D3IA0A087WXS9 549 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 TBC1D3EA0A087X179 549 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 TBC1D3KA0A087X1G2 549 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 TBC1D3FA6NER0 549 aaPredicted RBP11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 TBC1D3LB9A6J9 549 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 CYP7B1O75881 506 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 TBC1D3HP0C7X1 549 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 ADH5P11766 374 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 PRDX6P30041 224 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 CLCN2P51788 898 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 CCNG1P51959 295 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 TEAD2Q15562 447 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 HIST2H2ACQ16777 129 aaPredicted RBP11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 EMC10Q5UCC4 262 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 TBC1D3GQ6DHY5 549 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 HIST2H2AA3Q6FI13 130 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 TBC1D3CQ6IPX1 549 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 NEPROQ6NW34 567 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 GCNT7Q6ZNI0 430 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 EIF3MQ7L2H7 374 aaKnown RBP11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 TBC1D3Q8IZP1 549 aaPredicted RBP11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 RASSF5Q8WWW0 418 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 FAM84AQ96KN4 292 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 KLHL1Q9NR64 748 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 ZDHHC7Q9NXF8 308 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 RCOR3Q9P2K3 495 aaPredicted RBP11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 PCDHB9Q9Y5E1 797 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 PHIPQ8WWQ0 1821 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 A0A0J9YVX5 310 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 MDM4O15151 490 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 MLNP12872 115 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 GNSP15586 552 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 PUDPQ08623 228 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 AKIRIN2Q53H80 203 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 FAM131AQ6UXB0 335 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 MINDY2Q8NBR6 621 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 REXO5Q96IC2 774 aaKnown RBP11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 MLPHQ9BV36 600 aaPredicted RBP11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 MTRRQ9UBK8 725 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 BTRCQ9Y297 605 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 MAGEB3O15480 346 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 CYP1A1P04798 512 aaPredicted RBP11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 PRKAR1AP10644 381 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 TFEBP19484 476 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 ITIH1P19827 911 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 S100A3P33764 101 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 MOGQ16653 247 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 PPM1JQ5JR12 505 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 SCIMPQ6UWF3 145 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 XYLT1Q86Y38 959 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 PTGR2Q8N8N7 351 aaPredicted RBP11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 HERVK_113Q902F9 699 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms