RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 RABGEF1Q9UJ41 708 aa19.56■□□□□ 0.72
TIMP4-201ENST00000287814 PCDHGA1Q9Y5H4 931 aa19.56■□□□□ 0.72
TIMP4-201ENST00000287814 PRSS21Q9Y6M0 314 aa19.56■□□□□ 0.72
TIMP4-201ENST00000287814 FAM237BA0A1B0GVD1 139 aa19.56■□□□□ 0.72
TIMP4-201ENST00000287814 A6NCN8 305 aa19.56■□□□□ 0.72
TIMP4-201ENST00000287814 GOLGA8KD6RF30 607 aa19.56■□□□□ 0.72
TIMP4-201ENST00000287814 GOLGA8TH3BQL2 631 aa19.56■□□□□ 0.72
TIMP4-201ENST00000287814 SNX2O60749 519 aa19.56■□□□□ 0.72
TIMP4-201ENST00000287814 RFPL3O75679 317 aa19.56■□□□□ 0.72
TIMP4-201ENST00000287814 ATP1B2P14415 290 aaPredicted RBP19.56■□□□□ 0.72
TIMP4-201ENST00000287814 ARCN1P48444 511 aaKnown RBP19.56■□□□□ 0.72
TIMP4-201ENST00000287814 DUSP3P51452 185 aaPredicted RBP19.56■□□□□ 0.72
TIMP4-201ENST00000287814 CLCNKAP51800 687 aa19.56■□□□□ 0.72
TIMP4-201ENST00000287814 CLDN6P56747 220 aa19.56■□□□□ 0.72
TIMP4-201ENST00000287814 DHX9Q08211 1270 aaKnown RBP19.56■□□□□ 0.72
TIMP4-201ENST00000287814 HLTFQ14527 1009 aaKnown RBP eCLIP19.56■□□□□ 0.72
TIMP4-201ENST00000287814 ANKRD20A4Q4UJ75 823 aa19.56■□□□□ 0.72
TIMP4-201ENST00000287814 C14orf28Q4W4Y0 310 aa19.56■□□□□ 0.72
TIMP4-201ENST00000287814 DUPD1Q68J44 220 aa19.56■□□□□ 0.72
TIMP4-201ENST00000287814 DHRS13Q6UX07 377 aa19.56■□□□□ 0.72
TIMP4-201ENST00000287814 XKR5Q6UX68 686 aa19.56■□□□□ 0.72
TIMP4-201ENST00000287814 EFL1Q7Z2Z2 1120 aaKnown RBP19.56■□□□□ 0.72
TIMP4-201ENST00000287814 TMEM135Q86UB9 458 aa19.56■□□□□ 0.72
TIMP4-201ENST00000287814 IGDCC3Q8IVU1 814 aa19.56■□□□□ 0.72
TIMP4-201ENST00000287814 IFI44Q8TCB0 444 aa19.56■□□□□ 0.72
TIMP4-201ENST00000287814 DPH5Q9H2P9 285 aa19.56■□□□□ 0.72
TIMP4-201ENST00000287814 IL1RAPL1Q9NZN1 696 aa19.56■□□□□ 0.72
TIMP4-201ENST00000287814 NCKIPSDQ9NZQ3 722 aa19.56■□□□□ 0.72
TIMP4-201ENST00000287814 SAMD15Q9P1V8 674 aa19.56■□□□□ 0.72
TIMP4-201ENST00000287814 ANAPC5Q9UJX4 755 aa19.56■□□□□ 0.72
TIMP4-201ENST00000287814 MAD1L1Q9Y6D9 718 aa19.56■□□□□ 0.72
TIMP4-201ENST00000287814 ASXL3Q9C0F0 2248 aa19.55■□□□□ 0.72
TIMP4-201ENST00000287814 ZCWPW2A0A1B0GU75 182 aa19.55■□□□□ 0.72
TIMP4-201ENST00000287814 MAGEB16A2A368 324 aa19.55■□□□□ 0.72
TIMP4-201ENST00000287814 OR1I1O60431 355 aa19.55■□□□□ 0.72
TIMP4-201ENST00000287814 ADRB1P08588 477 aa19.55■□□□□ 0.72
TIMP4-201ENST00000287814 RPIAP49247 311 aa19.55■□□□□ 0.72
TIMP4-201ENST00000287814 TRADDQ15628 312 aa19.55■□□□□ 0.72
TIMP4-201ENST00000287814 BCL7AQ4VC05 210 aa19.55■□□□□ 0.72
TIMP4-201ENST00000287814 FAM83HQ6ZRV2 1179 aaPredicted RBP19.55■□□□□ 0.72
TIMP4-201ENST00000287814 ARL14Q8N4G2 192 aa19.55■□□□□ 0.72
TIMP4-201ENST00000287814 CHCHD4Q8N4Q1 142 aa19.55■□□□□ 0.72
TIMP4-201ENST00000287814 ADAMTS14Q8WXS8 1223 aa19.55■□□□□ 0.72
TIMP4-201ENST00000287814 OSGEPL1Q9H4B0 414 aa19.55■□□□□ 0.72
TIMP4-201ENST00000287814 SCHIP1Q9P0W5 487 aaPredicted RBP19.55■□□□□ 0.72
TIMP4-201ENST00000287814 WASF3Q9UPY6 502 aa19.55■□□□□ 0.72
TIMP4-201ENST00000287814 CD3EAPO15446 510 aaKnown RBP19.54■□□□□ 0.72
TIMP4-201ENST00000287814 RALBP11234 206 aa19.54■□□□□ 0.72
TIMP4-201ENST00000287814 PBLDP30039 288 aaPredicted RBP19.54■□□□□ 0.72
TIMP4-201ENST00000287814 FOXC1Q12948 553 aa19.54■□□□□ 0.72
TIMP4-201ENST00000287814 FASTKD1Q53R41 847 aaKnown RBP19.54■□□□□ 0.72
TIMP4-201ENST00000287814 ARMC3Q5W041 872 aa19.54■□□□□ 0.72
TIMP4-201ENST00000287814 KIAA0930Q6ICG6 404 aaPredicted RBP19.54■□□□□ 0.72
TIMP4-201ENST00000287814 IYDQ6PHW0 289 aa19.54■□□□□ 0.72
TIMP4-201ENST00000287814 RAB44Q7Z6P3 723 aaPredicted RBP19.54■□□□□ 0.72
TIMP4-201ENST00000287814 AMZ2Q86W34 360 aa19.54■□□□□ 0.72
TIMP4-201ENST00000287814 HEXDCQ8WVB3 486 aa19.54■□□□□ 0.72
TIMP4-201ENST00000287814 ZNF669Q96BR6 464 aaPredicted RBP19.54■□□□□ 0.72
TIMP4-201ENST00000287814 ZNF514Q96K75 400 aaPredicted RBP19.54■□□□□ 0.72
TIMP4-201ENST00000287814 WDR83Q9BRX9 315 aaKnown RBP19.54■□□□□ 0.72
TIMP4-201ENST00000287814 LRRC1Q9BTT6 524 aa19.54■□□□□ 0.72
TIMP4-201ENST00000287814 CATSPERZQ9NTU4 200 aa19.54■□□□□ 0.72
TIMP4-201ENST00000287814 GRHL1Q9NZI5 618 aa19.54■□□□□ 0.72
TIMP4-201ENST00000287814 DNMT3AQ9Y6K1 912 aaPredicted RBP19.54■□□□□ 0.72
TIMP4-201ENST00000287814 RPS6KL1Q9Y6S9 549 aa19.54■□□□□ 0.72
TIMP4-201ENST00000287814 RNF215Q9Y6U7 377 aa19.54■□□□□ 0.72
TIMP4-201ENST00000287814 CFAP99D6REC4 459 aa19.53■□□□□ 0.72
TIMP4-201ENST00000287814 BRAFP15056 766 aa19.53■□□□□ 0.72
TIMP4-201ENST00000287814 RPL10P27635 214 aaKnown RBP19.53■□□□□ 0.72
TIMP4-201ENST00000287814 PRLHRP49683 370 aa19.53■□□□□ 0.72
TIMP4-201ENST00000287814 SLC7A5Q01650 507 aa19.53■□□□□ 0.72
TIMP4-201ENST00000287814 ILKQ13418 452 aa19.53■□□□□ 0.72
TIMP4-201ENST00000287814 TUBB2AQ13885 445 aa19.53■□□□□ 0.72
TIMP4-201ENST00000287814 NFE2L1Q14494 772 aa19.53■□□□□ 0.72
TIMP4-201ENST00000287814 ITIH4Q14624 930 aa19.53■□□□□ 0.72
TIMP4-201ENST00000287814 BBS9Q3SYG4 887 aa19.53■□□□□ 0.72
TIMP4-201ENST00000287814 HP1BP3Q5SSJ5 553 aaPredicted RBP19.53■□□□□ 0.72
TIMP4-201ENST00000287814 LILRA3Q8N6C8 439 aaPredicted RBP19.53■□□□□ 0.72
TIMP4-201ENST00000287814 STAMBPL1Q96FJ0 436 aa19.53■□□□□ 0.72
TIMP4-201ENST00000287814 LINC00615Q96LM1 132 aaPredicted RBP19.53■□□□□ 0.72
TIMP4-201ENST00000287814 TUBB2BQ9BVA1 445 aa19.53■□□□□ 0.72
TIMP4-201ENST00000287814 NCOR2Q9Y618 2525 aa19.53■□□□□ 0.72
TIMP4-201ENST00000287814 HYAL3O43820 417 aaPredicted RBP19.52■□□□□ 0.72
TIMP4-201ENST00000287814 PMLP29590 882 aa19.52■□□□□ 0.72
TIMP4-201ENST00000287814 DRG2P55039 364 aaKnown RBP19.52■□□□□ 0.72
TIMP4-201ENST00000287814 DMPKQ09013 629 aa19.52■□□□□ 0.72
TIMP4-201ENST00000287814 SEPT7Q16181 437 aaKnown RBP19.52■□□□□ 0.72
TIMP4-201ENST00000287814 PACS1Q6VY07 963 aa19.52■□□□□ 0.72
TIMP4-201ENST00000287814 CERS6Q6ZMG9 384 aa19.52■□□□□ 0.72
TIMP4-201ENST00000287814 SFRP1Q8N474 314 aa19.52■□□□□ 0.72
TIMP4-201ENST00000287814 NOA1Q8NC60 698 aaKnown RBP19.52■□□□□ 0.72
TIMP4-201ENST00000287814 SLC37A2Q8TED4 501 aa19.52■□□□□ 0.72
TIMP4-201ENST00000287814 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.52■□□□□ 0.72
TIMP4-201ENST00000287814 CCDC74AQ96AQ1 378 aa19.52■□□□□ 0.72
TIMP4-201ENST00000287814 EBNA1BP2Q99848 306 aaKnown RBP19.52■□□□□ 0.72
TIMP4-201ENST00000287814 PLAC1Q9HBJ0 212 aa19.52■□□□□ 0.72
TIMP4-201ENST00000287814 LRIT1Q9P2V4 623 aa19.52■□□□□ 0.72
TIMP4-201ENST00000287814 WDR37Q9Y2I8 494 aa19.52■□□□□ 0.72
TIMP4-201ENST00000287814 ZFC3H1O60293 1989 aaKnown RBP19.52■□□□□ 0.72
TIMP4-201ENST00000287814 MGAT4DA6NG13 374 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms