RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 NSUN5Q96P11 429 aaKnown RBP20.73■□□□□ 0.91
YBX3-202ENST00000279550 P2RY13Q9BPV8 354 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 TRMOQ9BU70 441 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 PPIL1Q9Y3C6 166 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 COMMD10Q9Y6G5 202 aa20.73■□□□□ 0.91
YBX3-202ENST00000279550 GLYATL1P3A0A0U1RQE8 302 aa20.72■□□□□ 0.91
YBX3-202ENST00000279550 GOLGA8CPA6NN73 597 aa20.72■□□□□ 0.91
YBX3-202ENST00000279550 COX4I1P13073 169 aa20.72■□□□□ 0.91
YBX3-202ENST00000279550 GFAPP14136 432 aa20.72■□□□□ 0.91
YBX3-202ENST00000279550 ITGALP20701 1170 aa20.72■□□□□ 0.91
YBX3-202ENST00000279550 PIK3R1P27986 724 aa20.72■□□□□ 0.91
YBX3-202ENST00000279550 CTHP32929 405 aa20.72■□□□□ 0.91
YBX3-202ENST00000279550 SPAM1P38567 509 aa20.72■□□□□ 0.91
YBX3-202ENST00000279550 GALK1P51570 392 aa20.72■□□□□ 0.91
YBX3-202ENST00000279550 MXRA7P84157 204 aa20.72■□□□□ 0.91
YBX3-202ENST00000279550 LRRC66Q68CR7 880 aa20.72■□□□□ 0.91
YBX3-202ENST00000279550 CERS6Q6ZMG9 384 aa20.72■□□□□ 0.91
YBX3-202ENST00000279550 TPRG1Q6ZUI0 275 aa20.72■□□□□ 0.91
YBX3-202ENST00000279550 SUGP1Q8IWZ8 645 aaKnown RBP20.72■□□□□ 0.91
YBX3-202ENST00000279550 SCRN2Q96FV2 425 aa20.72■□□□□ 0.91
YBX3-202ENST00000279550 CLPTM1LQ96KA5 538 aa20.72■□□□□ 0.91
YBX3-202ENST00000279550 MCCC1Q96RQ3 725 aaPredicted RBP20.72■□□□□ 0.91
YBX3-202ENST00000279550 C19orf43Q9BQ61 176 aa20.72■□□□□ 0.91
YBX3-202ENST00000279550 MTG2Q9H4K7 406 aa20.72■□□□□ 0.91
YBX3-202ENST00000279550 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.72■□□□□ 0.91
YBX3-202ENST00000279550 MUC22E2RYF6 1773 aaPredicted RBP20.71■□□□□ 0.91
YBX3-202ENST00000279550 TRPC5OSA6NMA1 111 aa20.71■□□□□ 0.91
YBX3-202ENST00000279550 E5RI56 91 aa20.71■□□□□ 0.91
YBX3-202ENST00000279550 CHRM1P11229 460 aaPredicted RBP20.71■□□□□ 0.91
YBX3-202ENST00000279550 RPS3P23396 243 aaKnown RBP eCLIP20.71■□□□□ 0.91
YBX3-202ENST00000279550 PRDX6P30041 224 aa20.71■□□□□ 0.91
YBX3-202ENST00000279550 HK3P52790 923 aa20.71■□□□□ 0.91
YBX3-202ENST00000279550 COPAP53621 1224 aa20.71■□□□□ 0.91
YBX3-202ENST00000279550 SLC25A3Q00325 362 aa20.71■□□□□ 0.91
YBX3-202ENST00000279550 FBXO48Q5FWF7 155 aa20.71■□□□□ 0.91
YBX3-202ENST00000279550 CLEC6AQ6EIG7 209 aa20.71■□□□□ 0.91
YBX3-202ENST00000279550 CBARPQ8N350 705 aaPredicted RBP20.71■□□□□ 0.91
YBX3-202ENST00000279550 CPSF7Q8N684 471 aaKnown RBP20.71■□□□□ 0.91
YBX3-202ENST00000279550 MAGEC3Q8TD91 643 aa20.71■□□□□ 0.91
YBX3-202ENST00000279550 DNASE1L2Q92874 299 aa20.71■□□□□ 0.91
YBX3-202ENST00000279550 FAR2Q96K12 515 aa20.71■□□□□ 0.91
YBX3-202ENST00000279550 HEPHQ9BQS7 1158 aa20.71■□□□□ 0.91
YBX3-202ENST00000279550 TMEM245Q9H330 911 aa20.71■□□□□ 0.91
YBX3-202ENST00000279550 MMADHCQ9H3L0 296 aaPredicted RBP20.71■□□□□ 0.91
YBX3-202ENST00000279550 APPL1Q9UKG1 709 aa20.71■□□□□ 0.91
YBX3-202ENST00000279550 DHRS7Q9Y394 339 aa20.71■□□□□ 0.91
YBX3-202ENST00000279550 TRAF6Q9Y4K3 522 aa20.71■□□□□ 0.91
YBX3-202ENST00000279550 PCDHB1Q9Y5F3 818 aa20.71■□□□□ 0.91
YBX3-202ENST00000279550 LOC100653049A0A140TA62 436 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 ENTPD5O75356 428 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 KRT34O76011 436 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 CDK14O94921 469 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 C1SP09871 688 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 ITGB6P18564 788 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 ACRV1P26436 265 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 EEF1DP29692 281 aaKnown RBP20.7■□□□□ 0.9
YBX3-202ENST00000279550 IL2P60568 153 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 TFF2Q03403 129 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 HNRNPA1L2Q32P51 320 aaKnown RBP20.7■□□□□ 0.9
YBX3-202ENST00000279550 PUS10Q3MIT2 529 aaKnown RBP20.7■□□□□ 0.9
YBX3-202ENST00000279550 TXNDC11Q6PKC3 985 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 SERPINA13PQ6UXR4 307 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 CYHR1Q6ZMK1 362 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 USP45Q70EL2 814 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 RAB44Q7Z6P3 723 aaPredicted RBP20.7■□□□□ 0.9
YBX3-202ENST00000279550 FBXO39Q8N4B4 442 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 ZNF641Q96N77 438 aaPredicted RBP20.7■□□□□ 0.9
YBX3-202ENST00000279550 KLHL32Q96NJ5 620 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 LENG8Q96PV6 779 aaPredicted RBP20.7■□□□□ 0.9
YBX3-202ENST00000279550 CLPBQ9H078 707 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 C1orf21Q9H246 121 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 MEAF6Q9HAF1 191 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 HEBP1Q9NRV9 189 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 THAP10Q9P2Z0 257 aaPredicted RBP20.7■□□□□ 0.9
YBX3-202ENST00000279550 NKX1-2Q9UD57 310 aaPredicted RBP20.7■□□□□ 0.9
YBX3-202ENST00000279550 TSR3Q9UJK0 312 aaKnown RBP20.7■□□□□ 0.9
YBX3-202ENST00000279550 HCN2Q9UL51 889 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 CHUKO15111 745 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 MAGEC1O60732 1142 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 IL9P15248 144 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 AGTR2P50052 363 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 SH3BP2P78314 561 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 PTSQ03393 145 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 DNAL1Q4LDG9 190 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 PTRHD1Q6GMV3 140 aaKnown RBP20.7■□□□□ 0.9
YBX3-202ENST00000279550 GDPD4Q6W3E5 623 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 RALGPS2Q86X27 583 aaPredicted RBP20.7■□□□□ 0.9
YBX3-202ENST00000279550 RBFAQ8N0V3 343 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 CLDN19Q8N6F1 224 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 WDR60Q8WVS4 1066 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 CMTM5Q96DZ9 223 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 B4GALT6Q9UBX8 382 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 CRLS1Q9UJA2 301 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 L3MBTL1Q9Y468 752 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 WASF2Q9Y6W5 498 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 PIAS3Q9Y6X2 628 aa20.7■□□□□ 0.9
YBX3-202ENST00000279550 COL4A2P08572 1712 aa20.69■□□□□ 0.9
YBX3-202ENST00000279550 EDDM13A0A1B0GTR0 161 aa20.69■□□□□ 0.9
YBX3-202ENST00000279550 ANTXRLA6NF34 631 aa20.69■□□□□ 0.9
YBX3-202ENST00000279550 KLK8O60259 260 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms