RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 SLC30A4O14863 429 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 MAPK13O15264 365 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 ZSCAN9O15535 394 aaPredicted RBP4.58□□□□□ -1.68
CD44-202ENST00000278385 SPRY1O43609 319 aaPredicted RBP4.58□□□□□ -1.68
CD44-202ENST00000278385 PAGE4O60829 102 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 FZD7O75084 574 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 ZNF821O75541 412 aaPredicted RBP4.58□□□□□ -1.68
CD44-202ENST00000278385 HEXIM1O94992 359 aaKnown RBP4.58□□□□□ -1.68
CD44-202ENST00000278385 AK1P00568 194 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 MT-ATP6P00846 226 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 GBAP04062 536 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 KRT8P05787 483 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 HLA-DOAP06340 250 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 FGF4P08620 206 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 CHN1P15882 459 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 EPORP19235 508 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 PCSK1P29120 753 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 ALDH4A1P30038 563 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 CD6P30203 668 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 CORO1AP31146 461 aaKnown RBP4.58□□□□□ -1.68
CD44-202ENST00000278385 GUCY1A2P33402 732 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 MCM5P33992 734 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 SOAT1P35610 550 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 GDF5P43026 501 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 FASLGP48023 281 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 PNLIPRP2P54317 469 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 PRRX1P54821 245 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 TIRAPP58753 221 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 ST8SIA6P61647 398 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 ABHD18Q0P651 414 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 SCGB2A2Q13296 93 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 PPIGQ13427 754 aaKnown RBP eCLIP4.58□□□□□ -1.68
CD44-202ENST00000278385 FOXE3Q13461 319 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 RAPSNQ13702 412 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 CSHL1Q14406 222 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 SQLEQ14534 574 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 PGM5Q15124 567 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 ASTE1Q2TB18 679 aaPredicted RBP4.58□□□□□ -1.68
CD44-202ENST00000278385 FAM214AQ32MH5 1076 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 ZNF750Q32MQ0 723 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 LSM12Q3MHD2 195 aaKnown RBP4.58□□□□□ -1.68
CD44-202ENST00000278385 GLE1Q53GS7 698 aaKnown RBP4.58□□□□□ -1.68
CD44-202ENST00000278385 HERC4Q5GLZ8 1057 aaPredicted RBP4.58□□□□□ -1.68
CD44-202ENST00000278385 FAM47AQ5JRC9 791 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 UBAP2Q5T6F2 1119 aaKnown RBP4.58□□□□□ -1.68
CD44-202ENST00000278385 PLA2G4FQ68DD2 849 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 ARHGAP17Q68EM7 881 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 NOTUMQ6P988 496 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 MOXD1Q6UVY6 613 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 TRIM72Q6ZMU5 477 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 PIK3AP1Q6ZUJ8 805 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 C1orf186Q6ZWK4 172 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 CCDC80Q76M96 950 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 CAMKMTQ7Z624 323 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 TMPRSS6Q8IU80 811 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 PSTKQ8IV42 348 aaKnown RBP4.58□□□□□ -1.68
CD44-202ENST00000278385 DENND6AQ8IWF6 608 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 MCEMP1Q8IX19 187 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 ZNF679Q8IYX0 411 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 CLYBLQ8N0X4 340 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 MMP21Q8N119 569 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 OR7G3Q8NG95 312 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 FAM151AQ8WW52 585 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 GLMPQ8WWB7 406 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 SLAMF9Q96A28 289 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 PTERQ96BW5 349 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 C19orf60Q96EN9 201 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 C5orf30Q96GV9 206 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 FBXL20Q96IG2 436 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 ATP6V1G3Q96LB4 118 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 PRICKLE1Q96MT3 831 aaPredicted RBP4.58□□□□□ -1.68
CD44-202ENST00000278385 RAD9AQ99638 391 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 HNRNPABQ99729 332 aaKnown RBP4.58□□□□□ -1.68
CD44-202ENST00000278385 CAPS2Q9BXY5 557 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 TRIM2Q9C040 744 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 POLR1EQ9GZS1 481 aaKnown RBP4.58□□□□□ -1.68
CD44-202ENST00000278385 IQCGQ9H095 443 aaKnown RBP4.58□□□□□ -1.68
CD44-202ENST00000278385 LRRC40Q9H9A6 602 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 FBRSL1Q9HCM7 1045 aaKnown RBP4.58□□□□□ -1.68
CD44-202ENST00000278385 GPR108Q9NPR9 543 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 TLR8Q9NR97 1041 aaKnown RBP4.58□□□□□ -1.68
CD44-202ENST00000278385 DNAJC11Q9NVH1 559 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 RLIMQ9NVW2 624 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 SMPD3Q9NY59 655 aaPredicted RBP4.58□□□□□ -1.68
CD44-202ENST00000278385 GDE1Q9NZC3 331 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 MALT1Q9UDY8 824 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 FBXW2Q9UKT8 454 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 OSGIN2Q9Y236 505 aa4.58□□□□□ -1.68
CD44-202ENST00000278385 PDS5AQ29RF7 1337 aaKnown RBP4.57□□□□□ -1.68
CD44-202ENST00000278385 CACNA1FO60840 1977 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 LOC102723996A0A087X1L8 192 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 TEX13CA0A0J9YWL9 993 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 LOC100653049A0A140TA62 436 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 A6NL46 340 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 NDUFS8O00217 210 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 E2F3O00716 465 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 PJA2O43164 708 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 ADCY6O43306 1168 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 PRDM1O75626 825 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 SURF6O75683 361 aaKnown RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms