RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 KIR2DS5Q14953 304 aa14.2□□□□□ -0.14
HMGN3-201ENST00000275036 SEPT7Q16181 437 aaKnown RBP14.2□□□□□ -0.14
HMGN3-201ENST00000275036 CLPPQ16740 277 aaPredicted RBP14.2□□□□□ -0.14
HMGN3-201ENST00000275036 PARP6Q2NL67 630 aa14.2□□□□□ -0.14
HMGN3-201ENST00000275036 GPRC6AQ5T6X5 926 aa14.2□□□□□ -0.14
HMGN3-201ENST00000275036 MEI1Q5TIA1 1274 aa14.2□□□□□ -0.14
HMGN3-201ENST00000275036 KIAA1614Q5VZ46 1190 aa14.2□□□□□ -0.14
HMGN3-201ENST00000275036 ZDHHC20Q5W0Z9 365 aa14.2□□□□□ -0.14
HMGN3-201ENST00000275036 INO80CQ6PI98 192 aaPredicted RBP14.2□□□□□ -0.14
HMGN3-201ENST00000275036 ARHGEF18Q6ZSZ5 1173 aa14.2□□□□□ -0.14
HMGN3-201ENST00000275036 TRAPPC5Q8IUR0 188 aa14.2□□□□□ -0.14
HMGN3-201ENST00000275036 TAB3Q8N5C8 712 aaPredicted RBP14.2□□□□□ -0.14
HMGN3-201ENST00000275036 CCDC112Q8NEF3 446 aa14.2□□□□□ -0.14
HMGN3-201ENST00000275036 BRSK1Q8TDC3 778 aa14.2□□□□□ -0.14
HMGN3-201ENST00000275036 NAT14Q8WUY8 206 aa14.2□□□□□ -0.14
HMGN3-201ENST00000275036 SLC39A7Q92504 469 aa14.2□□□□□ -0.14
HMGN3-201ENST00000275036 TTC9Q92623 222 aa14.2□□□□□ -0.14
HMGN3-201ENST00000275036 CCDC97Q96F63 343 aaPredicted RBP14.2□□□□□ -0.14
HMGN3-201ENST00000275036 SLC38A3Q99624 504 aa14.2□□□□□ -0.14
HMGN3-201ENST00000275036 CMKLR1Q99788 373 aa14.2□□□□□ -0.14
HMGN3-201ENST00000275036 ARNT2Q9HBZ2 717 aa14.2□□□□□ -0.14
HMGN3-201ENST00000275036 SMOXQ9NWM0 555 aa14.2□□□□□ -0.14
HMGN3-201ENST00000275036 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.2□□□□□ -0.14
HMGN3-201ENST00000275036 ZNF624Q9P2J8 865 aaPredicted RBP14.2□□□□□ -0.14
HMGN3-201ENST00000275036 CPNE7Q9UBL6 633 aa14.2□□□□□ -0.14
HMGN3-201ENST00000275036 C2orf81A6NN90 581 aa14.19□□□□□ -0.14
HMGN3-201ENST00000275036 PRAMEF1O95521 474 aa14.19□□□□□ -0.14
HMGN3-201ENST00000275036 WT1P19544 449 aaPredicted RBP14.19□□□□□ -0.14
HMGN3-201ENST00000275036 RPL10P27635 214 aaKnown RBP14.19□□□□□ -0.14
HMGN3-201ENST00000275036 SLC19A1P41440 591 aa14.19□□□□□ -0.14
HMGN3-201ENST00000275036 ZNF140P52738 457 aaPredicted RBP14.19□□□□□ -0.14
HMGN3-201ENST00000275036 GPLD1P80108 840 aa14.19□□□□□ -0.14
HMGN3-201ENST00000275036 ITGA9Q13797 1035 aa14.19□□□□□ -0.14
HMGN3-201ENST00000275036 OASLQ15646 514 aaKnown RBP14.19□□□□□ -0.14
HMGN3-201ENST00000275036 LDLRAP1Q5SW96 308 aa14.19□□□□□ -0.14
HMGN3-201ENST00000275036 SEL1L2Q5TEA6 688 aa14.19□□□□□ -0.14
HMGN3-201ENST00000275036 ZNF662Q6ZS27 426 aa14.19□□□□□ -0.14
HMGN3-201ENST00000275036 SLC9B2Q86UD5 537 aa14.19□□□□□ -0.14
HMGN3-201ENST00000275036 SLC13A5Q86YT5 568 aaPredicted RBP14.19□□□□□ -0.14
HMGN3-201ENST00000275036 OR4D9Q8NGE8 314 aa14.19□□□□□ -0.14
HMGN3-201ENST00000275036 ZNF398Q8TD17 642 aa14.19□□□□□ -0.14
HMGN3-201ENST00000275036 TMEM159Q96B96 161 aa14.19□□□□□ -0.14
HMGN3-201ENST00000275036 RTP4Q96DX8 246 aa14.19□□□□□ -0.14
HMGN3-201ENST00000275036 TBC1D10AQ9BXI6 508 aa14.19□□□□□ -0.14
HMGN3-201ENST00000275036 LZTFL1Q9NQ48 299 aa14.19□□□□□ -0.14
HMGN3-201ENST00000275036 PIH1D1Q9NWS0 290 aaKnown RBP14.19□□□□□ -0.14
HMGN3-201ENST00000275036 OR2AG2A6NM03 316 aa14.18□□□□□ -0.14
HMGN3-201ENST00000275036 OR5K4A6NMS3 321 aa14.18□□□□□ -0.14
HMGN3-201ENST00000275036 CCL22O00626 93 aa14.18□□□□□ -0.14
HMGN3-201ENST00000275036 HGSO14964 777 aaPredicted RBP14.18□□□□□ -0.14
HMGN3-201ENST00000275036 ZW10O43264 779 aa14.18□□□□□ -0.14
HMGN3-201ENST00000275036 LDB2O43679 373 aa14.18□□□□□ -0.14
HMGN3-201ENST00000275036 LIASO43766 372 aa14.18□□□□□ -0.14
HMGN3-201ENST00000275036 ZNF189O75820 626 aaPredicted RBP14.18□□□□□ -0.14
HMGN3-201ENST00000275036 SRP72O76094 671 aaKnown RBP14.18□□□□□ -0.14
HMGN3-201ENST00000275036 LIPCP11150 499 aa14.18□□□□□ -0.14
HMGN3-201ENST00000275036 SLC2A4P14672 509 aa14.18□□□□□ -0.14
HMGN3-201ENST00000275036 TPH1P17752 444 aa14.18□□□□□ -0.14
HMGN3-201ENST00000275036 XRCC1P18887 633 aaPredicted RBP14.18□□□□□ -0.14
HMGN3-201ENST00000275036 DRG2P55039 364 aaKnown RBP14.18□□□□□ -0.14
HMGN3-201ENST00000275036 TMPRSS15P98073 1019 aa14.18□□□□□ -0.14
HMGN3-201ENST00000275036 GTF2H3Q13889 308 aa14.18□□□□□ -0.14
HMGN3-201ENST00000275036 SIX1Q15475 284 aaPredicted RBP14.18□□□□□ -0.14
HMGN3-201ENST00000275036 TMEM71Q6P5X7 295 aa14.18□□□□□ -0.14
HMGN3-201ENST00000275036 TMEM220Q6QAJ8 160 aa14.18□□□□□ -0.14
HMGN3-201ENST00000275036 ABRAXAS1Q6UWZ7 409 aa14.18□□□□□ -0.14
HMGN3-201ENST00000275036 FAM83HQ6ZRV2 1179 aaPredicted RBP14.18□□□□□ -0.14
HMGN3-201ENST00000275036 PRUNE1Q86TP1 453 aa14.18□□□□□ -0.14
HMGN3-201ENST00000275036 VASH2Q86V25 355 aa14.18□□□□□ -0.14
HMGN3-201ENST00000275036 DTX1Q86Y01 620 aa14.18□□□□□ -0.14
HMGN3-201ENST00000275036 OR10G6Q8NH81 332 aa14.18□□□□□ -0.14
HMGN3-201ENST00000275036 C1orf54Q8WWF1 131 aa14.18□□□□□ -0.14
HMGN3-201ENST00000275036 TTC25Q96NG3 672 aa14.18□□□□□ -0.14
HMGN3-201ENST00000275036 PPP1R2P1Q96PQ5 205 aa14.18□□□□□ -0.14
HMGN3-201ENST00000275036 CCNL2Q96S94 520 aaPredicted RBP14.18□□□□□ -0.14
HMGN3-201ENST00000275036 SEMA4CQ9C0C4 833 aa14.18□□□□□ -0.14
HMGN3-201ENST00000275036 OCIAD1Q9NX40 245 aa14.18□□□□□ -0.14
HMGN3-201ENST00000275036 PDP2Q9P2J9 529 aa14.18□□□□□ -0.14
HMGN3-201ENST00000275036 WDR37Q9Y2I8 494 aa14.18□□□□□ -0.14
HMGN3-201ENST00000275036 GCN1Q92616 2671 aaKnown RBP14.18□□□□□ -0.14
HMGN3-201ENST00000275036 OR52A4PA6NMU1 304 aa14.17□□□□□ -0.14
HMGN3-201ENST00000275036 AGAP14A8MT82 685 aa14.17□□□□□ -0.14
HMGN3-201ENST00000275036 PDZK1P1A8MUH7 402 aa14.17□□□□□ -0.14
HMGN3-201ENST00000275036 ERVH48-1M5A8F1 160 aa14.17□□□□□ -0.14
HMGN3-201ENST00000275036 SGTAO43765 313 aa14.17□□□□□ -0.14
HMGN3-201ENST00000275036 DUX1O43812 170 aa14.17□□□□□ -0.14
HMGN3-201ENST00000275036 POP7O75817 140 aaKnown RBP14.17□□□□□ -0.14
HMGN3-201ENST00000275036 CRTAMO95727 393 aa14.17□□□□□ -0.14
HMGN3-201ENST00000275036 AP2A1O95782 977 aa14.17□□□□□ -0.14
HMGN3-201ENST00000275036 CCDC175P0C221 793 aa14.17□□□□□ -0.14
HMGN3-201ENST00000275036 EPHA4P54764 986 aa14.17□□□□□ -0.14
HMGN3-201ENST00000275036 TRA2AQ13595 282 aaKnown RBP eCLIP14.17□□□□□ -0.14
HMGN3-201ENST00000275036 CLCA4Q14CN2 919 aa14.17□□□□□ -0.14
HMGN3-201ENST00000275036 RPS6KA1Q15418 735 aa14.17□□□□□ -0.14
HMGN3-201ENST00000275036 XKR5Q6UX68 686 aa14.17□□□□□ -0.14
HMGN3-201ENST00000275036 WASH2PQ6VEQ5 465 aa14.17□□□□□ -0.14
HMGN3-201ENST00000275036 CCDC81Q6ZN84 652 aa14.17□□□□□ -0.14
HMGN3-201ENST00000275036 DET1Q7L5Y6 550 aa14.17□□□□□ -0.14
HMGN3-201ENST00000275036 BEND7Q8N7W2 519 aaPredicted RBP14.17□□□□□ -0.14
HMGN3-201ENST00000275036 BMPERQ8N8U9 685 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms