RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 CD274Q9NZQ7 290 aa16.42■□□□□ 0.22
CCDC40-201ENST00000269318 TMPRSS11EQ9UL52 423 aa16.42■□□□□ 0.22
CCDC40-201ENST00000269318 PRRC2BQ5JSZ5 2229 aaKnown RBP16.41■□□□□ 0.22
CCDC40-201ENST00000269318 E2F3O00716 465 aa16.41■□□□□ 0.22
CCDC40-201ENST00000269318 UBDO15205 165 aa16.41■□□□□ 0.22
CCDC40-201ENST00000269318 SNX2O60749 519 aa16.41■□□□□ 0.22
CCDC40-201ENST00000269318 LMNAP02545 664 aaKnown RBP16.41■□□□□ 0.22
CCDC40-201ENST00000269318 TIMP2P16035 220 aa16.41■□□□□ 0.22
CCDC40-201ENST00000269318 ZNF30P17039 623 aa16.41■□□□□ 0.22
CCDC40-201ENST00000269318 MESP2Q0VG99 397 aa16.41■□□□□ 0.22
CCDC40-201ENST00000269318 PTK2BQ14289 1009 aa16.41■□□□□ 0.22
CCDC40-201ENST00000269318 GAB4Q2WGN9 574 aa16.41■□□□□ 0.22
CCDC40-201ENST00000269318 TRMT5Q32P41 509 aaKnown RBP16.41■□□□□ 0.22
CCDC40-201ENST00000269318 DEFB107AQ8IZN7 70 aa16.41■□□□□ 0.22
CCDC40-201ENST00000269318 BPIFB1Q8TDL5 484 aa16.41■□□□□ 0.22
CCDC40-201ENST00000269318 COPS8Q99627 209 aa16.41■□□□□ 0.22
CCDC40-201ENST00000269318 ZNF225Q9UK10 706 aa16.41■□□□□ 0.22
CCDC40-201ENST00000269318 C2orf16Q68DN1 1984 aa16.41■□□□□ 0.22
CCDC40-201ENST00000269318 CCNT2O60583 730 aaKnown RBP16.4■□□□□ 0.22
CCDC40-201ENST00000269318 MLYCDO95822 493 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 CYP2A6P11509 494 aaPredicted RBP16.4■□□□□ 0.22
CCDC40-201ENST00000269318 GNAZP19086 355 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 DGKAP23743 735 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 VIPR1P32241 457 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 RGS4P49798 205 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 SQLEQ14534 574 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 RIPOR1Q6ZS17 1223 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 FGF13Q92913 245 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 SMARCD2Q92925 531 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 ULK4Q96C45 1275 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 LRIG1Q96JA1 1093 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 ZFYVE19Q96K21 471 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 EBF2Q9HAK2 575 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 PCDH12Q9NPG4 1184 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 SPATS2LQ9NUQ6 558 aaKnown RBP16.4■□□□□ 0.22
CCDC40-201ENST00000269318 UTP6Q9NYH9 597 aaKnown RBP16.4■□□□□ 0.22
CCDC40-201ENST00000269318 DKK3Q9UBP4 350 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 IL36AQ9UHA7 158 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 EIF2B4Q9UI10 523 aaKnown RBP16.4■□□□□ 0.22
CCDC40-201ENST00000269318 CDH22Q9UJ99 828 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 SLC8A2Q9UPR5 921 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 ATP6AP2A0A1C7CYW4 349 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 OTOL1A6NHN0 477 aaPredicted RBP16.4■□□□□ 0.22
CCDC40-201ENST00000269318 UPK3BL1B0FP48 263 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 UPK3BL2E5RIL1 263 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 AIM2O14862 343 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 PIP5K1BO14986 540 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 ATP6AP2O75787 350 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 CIB2O75838 187 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 EZRP15311 586 aaKnown RBP16.4■□□□□ 0.22
CCDC40-201ENST00000269318 PRDX3P30048 256 aaKnown RBP16.4■□□□□ 0.22
CCDC40-201ENST00000269318 ACTR3P61158 418 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 ARHGEF7Q14155 803 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 CRY1Q16526 586 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 WLSQ5T9L3 541 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 HSD11B1LQ7Z5J1 315 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 SYVN1Q86TM6 617 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 PHYKPLQ8IUZ5 450 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 MYO1HQ8N1T3 1032 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 KYQ8NBH2 561 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 PDPRQ8NCN5 879 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 ESAMQ96AP7 390 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 AKTIPQ9H8T0 292 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 SMOXQ9NWM0 555 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 PKD2L2Q9NZM6 624 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 KLHL42Q9P2K6 505 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 TSR3Q9UJK0 312 aaKnown RBP16.4■□□□□ 0.22
CCDC40-201ENST00000269318 PTGDR2Q9Y5Y4 395 aa16.4■□□□□ 0.22
CCDC40-201ENST00000269318 H0Y3Z8 333 aa16.39■□□□□ 0.21
CCDC40-201ENST00000269318 KRT36O76013 467 aa16.39■□□□□ 0.21
CCDC40-201ENST00000269318 PSMG1O95456 288 aa16.39■□□□□ 0.21
CCDC40-201ENST00000269318 ESRRBO95718 433 aa16.39■□□□□ 0.21
CCDC40-201ENST00000269318 FSHRP23945 695 aa16.39■□□□□ 0.21
CCDC40-201ENST00000269318 NUDT2P50583 147 aa16.39■□□□□ 0.21
CCDC40-201ENST00000269318 ATP4BP51164 291 aa16.39■□□□□ 0.21
CCDC40-201ENST00000269318 DCDC1P59894 354 aa16.39■□□□□ 0.21
CCDC40-201ENST00000269318 TBL3Q12788 808 aaKnown RBP16.39■□□□□ 0.21
CCDC40-201ENST00000269318 PCBP2Q15366 365 aaKnown RBP eCLIP16.39■□□□□ 0.215e-7■■■■■ 29.1
CCDC40-201ENST00000269318 ZNF805Q5CZA5 627 aa16.39■□□□□ 0.21
CCDC40-201ENST00000269318 FRA10AC1Q70Z53 315 aa16.39■□□□□ 0.21
CCDC40-201ENST00000269318 CFAP61Q8NHU2 1237 aa16.39■□□□□ 0.21
CCDC40-201ENST00000269318 DTX3LQ8TDB6 740 aa16.39■□□□□ 0.21
CCDC40-201ENST00000269318 HCAR2Q8TDS4 363 aa16.39■□□□□ 0.21
CCDC40-201ENST00000269318 NXPE3Q969Y0 559 aa16.39■□□□□ 0.21
CCDC40-201ENST00000269318 RCN3Q96D15 328 aa16.39■□□□□ 0.21
CCDC40-201ENST00000269318 HGH1Q9BTY7 390 aa16.39■□□□□ 0.21
CCDC40-201ENST00000269318 ABCG8Q9H221 673 aa16.39■□□□□ 0.21
CCDC40-201ENST00000269318 EBF3Q9H4W6 596 aa16.39■□□□□ 0.21
CCDC40-201ENST00000269318 FBRSL1Q9HCM7 1045 aaKnown RBP16.39■□□□□ 0.21
CCDC40-201ENST00000269318 ELOVL2Q9NXB9 296 aa16.39■□□□□ 0.21
CCDC40-201ENST00000269318 NOP53Q9NZM5 478 aaKnown RBP16.39■□□□□ 0.21
CCDC40-201ENST00000269318 CD84Q9UIB8 345 aa16.39■□□□□ 0.21
CCDC40-201ENST00000269318 ADAMTS6Q9UKP5 1117 aa16.39■□□□□ 0.21
CCDC40-201ENST00000269318 OARD1Q9Y530 152 aa16.39■□□□□ 0.21
CCDC40-201ENST00000269318 PRRT4C9JH25 899 aa16.38■□□□□ 0.21
CCDC40-201ENST00000269318 FFAR2O15552 330 aa16.38■□□□□ 0.21
CCDC40-201ENST00000269318 GPC4O75487 556 aa16.38■□□□□ 0.21
CCDC40-201ENST00000269318 NFATC1O95644 943 aa16.38■□□□□ 0.21
CCDC40-201ENST00000269318 ALDOCP09972 364 aaKnown RBP16.38■□□□□ 0.21
CCDC40-201ENST00000269318 SLC6A11P48066 632 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms