RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 TDRD1Q9BXT4 1180 aaKnown RBP16.13■□□□□ 0.17
CTCF-201ENST00000264010 ZNF510Q9Y2H8 683 aa16.13■□□□□ 0.17
CTCF-201ENST00000264010 PENKP01210 267 aaPredicted RBP16.13■□□□□ 0.17
CTCF-201ENST00000264010 UROSP10746 265 aa16.13■□□□□ 0.17
CTCF-201ENST00000264010 KCNA5P22460 613 aa16.13■□□□□ 0.17
CTCF-201ENST00000264010 SLC6A4P31645 630 aa16.13■□□□□ 0.17
CTCF-201ENST00000264010 GRIA3P42263 894 aa16.13■□□□□ 0.17
CTCF-201ENST00000264010 SNRPD1P62314 119 aaKnown RBP16.13■□□□□ 0.17
CTCF-201ENST00000264010 CREMQ03060 361 aa16.13■□□□□ 0.17
CTCF-201ENST00000264010 HDAC2Q92769 488 aaKnown RBP16.13■□□□□ 0.17
CTCF-201ENST00000264010 EMILIN2Q9BXX0 1053 aa16.13■□□□□ 0.17
CTCF-201ENST00000264010 IL37Q9NZH6 218 aa16.13■□□□□ 0.17
CTCF-201ENST00000264010 KIAA1522Q9P206 1035 aaPredicted RBP16.13■□□□□ 0.17
CTCF-201ENST00000264010 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.13■□□□□ 0.17
CTCF-201ENST00000264010 LEF1Q9UJU2 399 aaPredicted RBP16.13■□□□□ 0.17
CTCF-201ENST00000264010 GPC6Q9Y625 555 aaPredicted RBP16.13■□□□□ 0.17
CTCF-201ENST00000264010 ZNF839A8K0R7 811 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 A8MX80 341 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 ADGRE1Q14246 886 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 RGS21Q2M5E4 152 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 CACHD1Q5VU97 1274 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 KLHDC10Q6PID8 442 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 ZFAND2BQ8WV99 257 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 L3HYPDHQ96EM0 354 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 TTLL2Q9BWV7 592 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 CEP44Q9C0F1 390 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 NUDT4Q9NZJ9 180 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 WDR37Q9Y2I8 494 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 CBFA2T3O75081 653 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 NR4A1P22736 598 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 PPM1AP35813 382 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 PPP1R3AQ16821 1122 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 VPS26BQ4G0F5 336 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 AMIGO2Q86SJ2 522 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 UBXN10Q96LJ8 280 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 CYP2S1Q96SQ9 504 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.12■□□□□ 0.17
CTCF-201ENST00000264010 PLK2Q9NYY3 685 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 CFAP97Q9P2B7 532 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 OPTCQ9UBM4 332 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 CDC7O00311 574 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 BCAS2O75934 225 aaPredicted RBP16.12■□□□□ 0.17
CTCF-201ENST00000264010 SOD2P04179 222 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 SPATA31D3P0C874 917 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 INPP1P49441 399 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 BNIP2Q12982 314 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 ARHGAP15Q53QZ3 475 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 CCDC81Q6ZN84 652 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 SPATA31D4Q6ZUB0 917 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 CCDC149Q6ZUS6 474 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 GET4Q7L5D6 327 aaPredicted RBP16.12■□□□□ 0.17
CTCF-201ENST00000264010 ZCCHC7Q8N3Z6 543 aaKnown RBP16.12■□□□□ 0.17
CTCF-201ENST00000264010 ASB9Q96DX5 294 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 PLGRKTQ9HBL7 147 aa16.12■□□□□ 0.17
CTCF-201ENST00000264010 FAM92AA1XBS5 289 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 E7ENX8 843 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 MMP2P08253 660 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 SLC2A4P14672 509 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 ATF6P18850 670 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 FASP25445 335 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 CSKP41240 450 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 ATP4BP51164 291 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 MPPE1Q53F39 396 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 ZNF783Q6ZMS7 281 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 SUN5Q8TC36 379 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 NCLNQ969V3 563 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 CACNA2D2Q9NY47 1150 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 PKD2L2Q9NZM6 624 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 ZMYM5Q9UJ78 669 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 COQ6Q9Y2Z9 468 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 ACTL7AQ9Y615 435 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 INPP4BO15327 924 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 OTCP00480 354 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 FCGR1AP12314 374 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 TLE2Q04725 743 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 SLC8B1Q6J4K2 584 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 USP45Q70EL2 814 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 PDSS2Q86YH6 399 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 SLC7A5P1Q8MH63 180 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 GSTO2Q9H4Y5 243 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 NEU3Q9UQ49 428 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 SPO11Q9Y5K1 396 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 ZNF236Q9UL36 1845 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 MUSKO15146 869 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 SLC22A3O75751 556 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 CDK14O94921 469 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 PRAMEF1O95521 474 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 BCL10O95999 233 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 JUNP05412 331 aaKnown RBP16.11■□□□□ 0.17
CTCF-201ENST00000264010 EIF4EBP2Q13542 120 aaPredicted RBP16.11■□□□□ 0.17
CTCF-201ENST00000264010 CEACAM7Q14002 265 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 KLHDC8BQ8IXV7 354 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 STON2Q8WXE9 905 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 C17orf80Q9BSJ5 609 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 C1orf50Q9BV19 199 aa16.11■□□□□ 0.17
CTCF-201ENST00000264010 SUCOQ9UBS9 1254 aaKnown RBP16.11■□□□□ 0.17
CTCF-201ENST00000264010 EIF2B4Q9UI10 523 aaKnown RBP16.11■□□□□ 0.17
CTCF-201ENST00000264010 ADAM12O43184 909 aa16.1■□□□□ 0.17
CTCF-201ENST00000264010 SORBS2O94875 1100 aaKnown RBP16.1■□□□□ 0.17
CTCF-201ENST00000264010 PEX11BO96011 259 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms