RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 UGT1A5P35504 534 aa12.78□□□□□ -0.36
SPTLC1-201ENST00000262554 BMPR1AP36894 532 aa12.78□□□□□ -0.36
SPTLC1-201ENST00000262554 GRB7Q14451 532 aa12.78□□□□□ -0.36
SPTLC1-201ENST00000262554 RPS6KA2Q15349 733 aa12.78□□□□□ -0.36
SPTLC1-201ENST00000262554 GSTA3Q16772 222 aa12.78□□□□□ -0.36
SPTLC1-201ENST00000262554 CARD16Q5EG05 197 aa12.78□□□□□ -0.36
SPTLC1-201ENST00000262554 ZFP1Q6P2D0 407 aa12.78□□□□□ -0.36
SPTLC1-201ENST00000262554 CRTC1Q6UUV9 634 aa12.78□□□□□ -0.36
SPTLC1-201ENST00000262554 IZUMO2Q6UXV1 221 aa12.78□□□□□ -0.36
SPTLC1-201ENST00000262554 HACD2Q6Y1H2 254 aa12.78□□□□□ -0.36
SPTLC1-201ENST00000262554 GPRIN3Q6ZVF9 776 aa12.78□□□□□ -0.36
SPTLC1-201ENST00000262554 SPATA19Q7Z5L4 167 aa12.78□□□□□ -0.36
SPTLC1-201ENST00000262554 TSPAN33Q86UF1 283 aa12.78□□□□□ -0.36
SPTLC1-201ENST00000262554 PHYKPLQ8IUZ5 450 aa12.78□□□□□ -0.36
SPTLC1-201ENST00000262554 PCYOX1LQ8NBM8 494 aa12.78□□□□□ -0.36
SPTLC1-201ENST00000262554 OR9I1Q8NGQ6 314 aa12.78□□□□□ -0.36
SPTLC1-201ENST00000262554 ECHDC3Q96DC8 303 aa12.78□□□□□ -0.36
SPTLC1-201ENST00000262554 ZNF641Q96N77 438 aaPredicted RBP12.78□□□□□ -0.36
SPTLC1-201ENST00000262554 ZNF382Q96SR6 550 aa12.78□□□□□ -0.36
SPTLC1-201ENST00000262554 C17orf80Q9BSJ5 609 aa12.78□□□□□ -0.36
SPTLC1-201ENST00000262554 HTATIP2Q9BUP3 242 aa12.78□□□□□ -0.36
SPTLC1-201ENST00000262554 ZDHHC6Q9H6R6 413 aa12.78□□□□□ -0.36
SPTLC1-201ENST00000262554 PPIL1Q9Y3C6 166 aa12.78□□□□□ -0.36
SPTLC1-201ENST00000262554 A0A1B0GTL3 188 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 RFPL2O75678 378 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 BCAS2O75934 225 aaPredicted RBP12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 RHOP08100 348 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 IDO1P14902 403 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 ITGB6P18564 788 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 PSMD8P48556 350 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 CCNHP51946 323 aaPredicted RBP12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 ECT2LQ008S8 904 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 FPGSQ05932 587 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 PCBP2Q15366 365 aaKnown RBP eCLIP12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 LRRC66Q68CR7 880 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 MACC1Q6ZN28 852 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 KBTBD2Q8IY47 623 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 NXPE1Q8N323 547 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 ZBTB2Q8N680 514 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 RNF148Q8N7C7 305 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 SNX31Q8N9S9 440 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 BHLHE22Q8NFJ8 381 aaPredicted RBP12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 SP7Q8TDD2 431 aaPredicted RBP12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 MICAL1Q8TDZ2 1067 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 POF1BQ8WVV4 589 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 DLG3Q92796 817 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 IRF7Q92985 503 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 ESAMQ96AP7 390 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 ROPN1LQ96C74 230 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 CCDC97Q96F63 343 aaPredicted RBP12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 DCBLD2Q96PD2 775 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 PLEKHG4BQ96PX9 1271 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 CCT7Q99832 543 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 ECSITQ9BQ95 431 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 FAM126AQ9BYI3 521 aaPredicted RBP12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 SPAG4Q9NPE6 437 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 TLR9Q9NR96 1032 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 CXXC1Q9P0U4 656 aaPredicted RBP12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 TBC1D14Q9P2M4 693 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 EPS15L1Q9UBC2 864 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 GIMAP2Q9UG22 337 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 PRKAG2Q9UGJ0 569 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 TSR3Q9UJK0 312 aaKnown RBP12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 CROTQ9UKG9 612 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 PSMD13Q9UNM6 376 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 TIMM22Q9Y584 194 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 PRSS21Q9Y6M0 314 aa12.77□□□□□ -0.37
SPTLC1-201ENST00000262554 A0A1W2PQ67 120 aa12.76□□□□□ -0.37
SPTLC1-201ENST00000262554 SOBPA7XYQ1 873 aa12.76□□□□□ -0.37
SPTLC1-201ENST00000262554 E7ENX8 843 aa12.76□□□□□ -0.37
SPTLC1-201ENST00000262554 H3BNX3 289 aa12.76□□□□□ -0.37
SPTLC1-201ENST00000262554 LIN7AO14910 233 aaPredicted RBP12.76□□□□□ -0.37
SPTLC1-201ENST00000262554 TLL1O43897 1013 aa12.76□□□□□ -0.37
SPTLC1-201ENST00000262554 MOSPD3O75425 235 aa12.76□□□□□ -0.37
SPTLC1-201ENST00000262554 MATN4O95460 622 aa12.76□□□□□ -0.37
SPTLC1-201ENST00000262554 CA5AP35218 305 aa12.76□□□□□ -0.37
SPTLC1-201ENST00000262554 DSG2Q14126 1118 aa12.76□□□□□ -0.37
SPTLC1-201ENST00000262554 DMC1Q14565 340 aa12.76□□□□□ -0.37
SPTLC1-201ENST00000262554 ZDHHC20Q5W0Z9 365 aa12.76□□□□□ -0.37
SPTLC1-201ENST00000262554 OGFOD2Q6N063 350 aa12.76□□□□□ -0.37
SPTLC1-201ENST00000262554 ELMSAN1Q6PJG2 1045 aa12.76□□□□□ -0.37
SPTLC1-201ENST00000262554 SBSNQ6UWP8 590 aa12.76□□□□□ -0.37
SPTLC1-201ENST00000262554 RNF111Q6ZNA4 994 aa12.76□□□□□ -0.37
SPTLC1-201ENST00000262554 DPY19L3Q6ZPD9 716 aa12.76□□□□□ -0.37
SPTLC1-201ENST00000262554 FUNDC1Q8IVP5 155 aa12.76□□□□□ -0.37
SPTLC1-201ENST00000262554 CLDN19Q8N6F1 224 aa12.76□□□□□ -0.37
SPTLC1-201ENST00000262554 LEMD2Q8NC56 503 aa12.76□□□□□ -0.37
SPTLC1-201ENST00000262554 GPR26Q8NDV2 337 aa12.76□□□□□ -0.37
SPTLC1-201ENST00000262554 RIN3Q8TB24 985 aa12.76□□□□□ -0.37
SPTLC1-201ENST00000262554 LKAAEAR1Q8TD35 194 aa12.76□□□□□ -0.37
SPTLC1-201ENST00000262554 SPHK2Q9NRA0 654 aa12.76□□□□□ -0.37
SPTLC1-201ENST00000262554 SPATS2LQ9NUQ6 558 aaKnown RBP12.76□□□□□ -0.37
SPTLC1-201ENST00000262554 RIC8BQ9NVN3 520 aa12.76□□□□□ -0.37
SPTLC1-201ENST00000262554 C6orf203Q9P0P8 240 aaPredicted RBP12.76□□□□□ -0.37
SPTLC1-201ENST00000262554 SUCOQ9UBS9 1254 aaKnown RBP12.76□□□□□ -0.37
SPTLC1-201ENST00000262554 ADAMTS6Q9UKP5 1117 aa12.76□□□□□ -0.37
SPTLC1-201ENST00000262554 NDUFAF1Q9Y375 327 aa12.76□□□□□ -0.37
SPTLC1-201ENST00000262554 PLXNB3Q9ULL4 1909 aa12.76□□□□□ -0.37
SPTLC1-201ENST00000262554 NR5A2O00482 541 aa12.76□□□□□ -0.37
SPTLC1-201ENST00000262554 FFAR2O15552 330 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms