RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 VAV1P15498 845 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 MAT2AP31153 395 aaKnown RBP13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 PLGLB1Q02325 96 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 C1DQ13901 141 aaKnown RBP13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 HECTD2Q5U5R9 776 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 OSTM1Q86WC4 334 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 SETD9Q8NE22 299 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 TMIEQ8NEW7 156 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 TSGA13Q96PP4 275 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 CDC6Q99741 560 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 MUC13Q9H3R2 512 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 MAGEE1Q9HCI5 957 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 C2orf71A6NGG8 1288 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 H3BUI4 141 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 MAN1A2O60476 641 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 LYPLA1O75608 230 aaPredicted RBP13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 TGDSO95455 350 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 IFNGP01579 166 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 RBPJQ06330 500 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 RUNX1T1Q06455 604 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 PFKFB4Q16877 469 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 PDCD4Q53EL6 469 aaKnown RBP13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 HDDC2Q7Z4H3 204 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 GPR149Q86SP6 731 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 GPR180Q86V85 440 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 TMEM126BQ8IUX1 230 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 ELSPBP1Q96BH3 223 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 SMOQ99835 787 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 TMEM27Q9HBJ8 222 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 POPDC3Q9HBV1 291 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 DNAJB4Q9UDY4 337 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 A6NCN8 305 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 TP53I11O14683 189 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 NR2F1P10589 423 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 UMPSP11172 480 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 UGT1A1P22309 533 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 RPS7P62081 194 aaKnown RBP13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 ZNF155Q12901 538 aaPredicted RBP13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 RPA4Q13156 261 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 TMEM63BQ5T3F8 832 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 CASP12Q6UXS9 341 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 KDM7AQ6ZMT4 941 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 HTR3DQ70Z44 454 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 TMPRSS6Q8IU80 811 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 KDM1BQ8NB78 822 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 PIK3C3Q8NEB9 887 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 ADCY4Q8NFM4 1077 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 TAS2R14Q9NYV8 317 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 ENTPD2Q9Y5L3 495 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 STRCP1A6NGW2 1772 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 AIM2O14862 343 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 CREB5Q02930 508 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 NCF4Q15080 339 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 PON2Q15165 354 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 DUSP6Q16828 381 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 SLC44A4Q53GD3 710 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 SAMD4BQ5PRF9 694 aaKnown RBP13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 RHBDF2Q6PJF5 856 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 PGM2Q96G03 612 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 NPY6RQ99463 290 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 ACSS3Q9H6R3 686 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 RARRES3Q9UL19 164 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 RAP2CQ9Y3L5 183 aa13.28□□□□□ -0.28
PRPF38A-201ENST00000257181 EIF3FO00303 357 aaPredicted RBP13.27□□□□□ -0.28
PRPF38A-201ENST00000257181 CDKN2BP42772 138 aa13.27□□□□□ -0.28
PRPF38A-201ENST00000257181 RPL7AP62424 266 aaKnown RBP13.27□□□□□ -0.28
PRPF38A-201ENST00000257181 CRYMQ14894 314 aa13.27□□□□□ -0.28
PRPF38A-201ENST00000257181 LINGO4Q6UY18 593 aa13.27□□□□□ -0.28
PRPF38A-201ENST00000257181 C14orf80Q86SX3 495 aa13.27□□□□□ -0.28
PRPF38A-201ENST00000257181 SLC41A1Q8IVJ1 513 aa13.27□□□□□ -0.28
PRPF38A-201ENST00000257181 BHLHE22Q8NFJ8 381 aaPredicted RBP13.27□□□□□ -0.28
PRPF38A-201ENST00000257181 SCAMP5Q8TAC9 235 aa13.27□□□□□ -0.28
PRPF38A-201ENST00000257181 PHF21BQ96EK2 531 aa13.27□□□□□ -0.28
PRPF38A-201ENST00000257181 NSMCE2Q96MF7 247 aa13.27□□□□□ -0.28
PRPF38A-201ENST00000257181 SPATA9Q9BWV2 254 aa13.27□□□□□ -0.28
PRPF38A-201ENST00000257181 GPR174Q9BXC1 333 aa13.27□□□□□ -0.28
PRPF38A-201ENST00000257181 PNMA8BQ9ULN7 279 aaPredicted RBP13.27□□□□□ -0.28
PRPF38A-201ENST00000257181 GRID2O43424 1007 aa13.27□□□□□ -0.28
PRPF38A-201ENST00000257181 MPC1LP0DKB6 136 aa13.27□□□□□ -0.28
PRPF38A-201ENST00000257181 PLA2G4EQ3MJ16 856 aa13.27□□□□□ -0.28
PRPF38A-201ENST00000257181 CLLU1OSQ5K130 101 aa13.27□□□□□ -0.28
PRPF38A-201ENST00000257181 NPNTQ6UXI9 565 aa13.27□□□□□ -0.28
PRPF38A-201ENST00000257181 OLFM3Q96PB7 478 aa13.27□□□□□ -0.28
PRPF38A-201ENST00000257181 S100A13Q99584 98 aa13.27□□□□□ -0.28
PRPF38A-201ENST00000257181 NOCTQ9UK39 431 aaKnown RBP13.27□□□□□ -0.28
PRPF38A-201ENST00000257181 PRORSD1PA6NEY8 169 aa13.27□□□□□ -0.29
PRPF38A-201ENST00000257181 KERAO60938 352 aa13.27□□□□□ -0.29
PRPF38A-201ENST00000257181 CALB2P22676 271 aa13.27□□□□□ -0.29
PRPF38A-201ENST00000257181 CSNK1DP48730 415 aa13.27□□□□□ -0.29
PRPF38A-201ENST00000257181 HTRA3P83110 453 aa13.27□□□□□ -0.29
PRPF38A-201ENST00000257181 FAM220AQ7Z4H9 259 aa13.27□□□□□ -0.29
PRPF38A-201ENST00000257181 FAM20CQ8IXL6 584 aa13.27□□□□□ -0.29
PRPF38A-201ENST00000257181 KBTBD2Q8IY47 623 aa13.27□□□□□ -0.29
PRPF38A-201ENST00000257181 TERB1Q8NA31 727 aa13.27□□□□□ -0.29
PRPF38A-201ENST00000257181 TRPV1Q8NER1 839 aa13.27□□□□□ -0.29
PRPF38A-201ENST00000257181 CMTM7Q96FZ5 175 aa13.27□□□□□ -0.29
PRPF38A-201ENST00000257181 RIOK2Q9BVS4 552 aaKnown RBP13.27□□□□□ -0.29
PRPF38A-201ENST00000257181 TFB2MQ9H5Q4 396 aaKnown RBP13.27□□□□□ -0.29
PRPF38A-201ENST00000257181 IL1RAPL1Q9NZN1 696 aa13.27□□□□□ -0.29
PRPF38A-201ENST00000257181 FETUBQ9UGM5 382 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms