RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 LRRC73Q5JTD7 316 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 FAM117BQ6P1L5 589 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 GALNT10Q86SR1 603 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 TMEM125Q96AQ2 219 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 NSUN3Q9H649 340 aaKnown RBP13.36□□□□□ -0.27
VHL-201ENST00000256474 MRM3Q9HC36 420 aaKnown RBP13.36□□□□□ -0.27
VHL-201ENST00000256474 FARSBQ9NSD9 589 aaKnown RBP13.36□□□□□ -0.27
VHL-201ENST00000256474 IFT80Q9P2H3 777 aaPredicted RBP13.36□□□□□ -0.27
VHL-201ENST00000256474 LEF1Q9UJU2 399 aaPredicted RBP13.36□□□□□ -0.27
VHL-201ENST00000256474 GABRQQ9UN88 632 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 RAI2Q9Y5P3 530 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 A0A1W2PP18 115 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 ARVCFO00192 962 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 DFNA5O60443 496 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 RPL26P61254 145 aaKnown RBP13.36□□□□□ -0.27
VHL-201ENST00000256474 ATP6V0D1P61421 351 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 ARHGEF7Q14155 803 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 NFE2Q16621 373 aaPredicted RBP13.36□□□□□ -0.27
VHL-201ENST00000256474 CPSF6Q16630 551 aaKnown RBP eCLIP13.36□□□□□ -0.27
VHL-201ENST00000256474 LETMD1Q6P1Q0 360 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 ITIH5Q86UX2 942 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 SNX29P2Q8IUI4 249 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 ZC3H7AQ8IWR0 971 aaKnown RBP13.36□□□□□ -0.27
VHL-201ENST00000256474 SEPT8Q92599 483 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 TMBIM1Q969X1 311 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 L3HYPDHQ96EM0 354 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 RIC8BQ9NVN3 520 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 TMEM248Q9NWD8 314 aa13.36□□□□□ -0.27
VHL-201ENST00000256474 FCF1Q9Y324 198 aaKnown RBP13.36□□□□□ -0.27
VHL-201ENST00000256474 IQCA1LA6NCM1 817 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 MROH6A6NGR9 719 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 KERAO60938 352 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 ACADVLP49748 655 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 ITGADQ13349 1161 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 C6orf136Q5SQH8 315 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 TMTC4Q5T4D3 741 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 RRAGCQ9HB90 399 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 PCDH12Q9NPG4 1184 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 AGO1Q9UL18 857 aaKnown RBP13.35□□□□□ -0.27
VHL-201ENST00000256474 SBF1O95248 1867 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 BRCA1P38398 1863 aaKnown RBP13.35□□□□□ -0.27
VHL-201ENST00000256474 SYCE1LA8MT33 242 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 AGRPO00253 132 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 DIRAS1O95057 198 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 BMP2P12643 396 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 TIAL1Q01085 375 aaKnown RBP eCLIP13.35□□□□□ -0.27
VHL-201ENST00000256474 ZNF33AQ06730 810 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 IL10RBQ08334 325 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 BNIP2Q12982 314 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 FAM174BQ3ZCQ3 159 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 PERM1Q5SV97 790 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 RNF219Q5W0B1 726 aaPredicted RBP13.35□□□□□ -0.27
VHL-201ENST00000256474 NADSYN1Q6IA69 706 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 RNF19BQ6ZMZ0 732 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 ANKFN1Q8N957 763 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.35□□□□□ -0.27
VHL-201ENST00000256474 MYRFLQ96LU7 910 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 BEGAINQ9BUH8 593 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 BDH2Q9BUT1 245 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 SDR39U1Q9NRG7 319 aaPredicted RBP13.35□□□□□ -0.27
VHL-201ENST00000256474 AGPAT4Q9NRZ5 378 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 WWOXQ9NZC7 414 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 OAS3Q9Y6K5 1087 aaKnown RBP13.35□□□□□ -0.27
VHL-201ENST00000256474 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.35□□□□□ -0.27
VHL-201ENST00000256474 GLTPD2A6NH11 291 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 SEC22BO75396 215 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 ZNF682O95780 498 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 SLC6A4P31645 630 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 POLR2IP36954 125 aaKnown RBP13.35□□□□□ -0.27
VHL-201ENST00000256474 CAPGP40121 348 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 NUP107P57740 925 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 ERVPABLB-1P60509 514 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 ZNF177Q13360 481 aaPredicted RBP13.35□□□□□ -0.27
VHL-201ENST00000256474 DDX39BQ13838 428 aaKnown RBP13.35□□□□□ -0.27
VHL-201ENST00000256474 MEP1AQ16819 746 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 RFTN2Q52LD8 501 aaPredicted RBP13.35□□□□□ -0.27
VHL-201ENST00000256474 MORN1Q5T089 497 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 GRAMD4Q6IC98 578 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 TMEM126BQ8IUX1 230 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 KIAA1191Q96A73 305 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 EPB41L1Q9H4G0 881 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 IPPKQ9H8X2 491 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 TMEM165Q9HC07 324 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 ZNF225Q9UK10 706 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 GPR45Q9Y5Y3 372 aa13.35□□□□□ -0.27
VHL-201ENST00000256474 PLXNA1Q9UIW2 1896 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 AQP12BA6NM10 295 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 BBIP1A8MTZ0 92 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 XYLBO75191 536 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 B3GALT4O96024 378 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 CST1P01037 141 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 FLT3LGP49771 235 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 SGSHP51688 502 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 HK3P52790 923 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 VAC14Q08AM6 782 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 PGS1Q32NB8 556 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 KANK2Q63ZY3 851 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 PRMT9Q6P2P2 845 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 ENPP6Q6UWR7 440 aa13.34□□□□□ -0.27
VHL-201ENST00000256474 AQP12AQ8IXF9 295 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms