RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 CCDC97Q96F63 343 aaPredicted RBP22.58■■□□□ 1.21
LSM4-201ENST00000252816 KCNF1Q9H3M0 494 aa22.58■■□□□ 1.21
LSM4-201ENST00000252816 FAM96AQ9H5X1 160 aa22.58■■□□□ 1.21
LSM4-201ENST00000252816 TMEM9Q9P0T7 183 aa22.58■■□□□ 1.21
LSM4-201ENST00000252816 ZNF624Q9P2J8 865 aaPredicted RBP22.58■■□□□ 1.21
LSM4-201ENST00000252816 RALYQ9UKM9 306 aaKnown RBP22.58■■□□□ 1.21
LSM4-201ENST00000252816 LOXL2Q9Y4K0 774 aa22.58■■□□□ 1.21
LSM4-201ENST00000252816 IGHV5-10-1A0A0J9YXX1 117 aa22.57■■□□□ 1.2
LSM4-201ENST00000252816 PDZK1P1A8MUH7 402 aa22.57■■□□□ 1.2
LSM4-201ENST00000252816 MSH3P20585 1137 aa22.57■■□□□ 1.2
LSM4-201ENST00000252816 AKT1P31749 480 aa22.57■■□□□ 1.2
LSM4-201ENST00000252816 HADHAP40939 763 aa22.57■■□□□ 1.2
LSM4-201ENST00000252816 SLC19A1P41440 591 aa22.57■■□□□ 1.2
LSM4-201ENST00000252816 GRIA1P42261 906 aa22.57■■□□□ 1.2
LSM4-201ENST00000252816 DRG2P55039 364 aaKnown RBP22.57■■□□□ 1.2
LSM4-201ENST00000252816 GPLD1P80108 840 aa22.57■■□□□ 1.2
LSM4-201ENST00000252816 CCDC173Q0VFZ6 552 aa22.57■■□□□ 1.2
LSM4-201ENST00000252816 SEPT6Q14141 434 aa22.57■■□□□ 1.2
LSM4-201ENST00000252816 C16orf72Q14CZ0 275 aa22.57■■□□□ 1.2
LSM4-201ENST00000252816 ABRAXAS1Q6UWZ7 409 aa22.57■■□□□ 1.2
LSM4-201ENST00000252816 DET1Q7L5Y6 550 aa22.57■■□□□ 1.2
LSM4-201ENST00000252816 LINC00523Q86TU6 105 aa22.57■■□□□ 1.2
LSM4-201ENST00000252816 OR52K1Q8NGK4 314 aa22.57■■□□□ 1.2
LSM4-201ENST00000252816 SGF29Q96ES7 293 aa22.57■■□□□ 1.2
LSM4-201ENST00000252816 RAB6BQ9NRW1 208 aa22.57■■□□□ 1.2
LSM4-201ENST00000252816 WDR37Q9Y2I8 494 aa22.57■■□□□ 1.2
LSM4-201ENST00000252816 ZKSCAN5Q9Y2L8 839 aa22.57■■□□□ 1.2
LSM4-201ENST00000252816 ERI2A8K979 691 aaKnown RBP22.56■■□□□ 1.2
LSM4-201ENST00000252816 RRP8O43159 456 aaKnown RBP22.56■■□□□ 1.2
LSM4-201ENST00000252816 SUN1O94901 812 aa22.56■■□□□ 1.2
LSM4-201ENST00000252816 ITGA2BP08514 1039 aa22.56■■□□□ 1.2
LSM4-201ENST00000252816 XRCC1P18887 633 aaPredicted RBP22.56■■□□□ 1.2
LSM4-201ENST00000252816 MPSTP25325 297 aa22.56■■□□□ 1.2
LSM4-201ENST00000252816 MC4RP32245 332 aa22.56■■□□□ 1.2
LSM4-201ENST00000252816 RPL22P35268 128 aaKnown RBP22.56■■□□□ 1.2
LSM4-201ENST00000252816 CDKN1CP49918 316 aaPredicted RBP22.56■■□□□ 1.2
LSM4-201ENST00000252816 LIMK2P53671 638 aa22.56■■□□□ 1.2
LSM4-201ENST00000252816 PCBP4P57723 403 aaKnown RBP22.56■■□□□ 1.2
LSM4-201ENST00000252816 DMPKQ09013 629 aa22.56■■□□□ 1.2
LSM4-201ENST00000252816 SEMA5AQ13591 1074 aa22.56■■□□□ 1.2
LSM4-201ENST00000252816 LONRF2Q1L5Z9 754 aa22.56■■□□□ 1.2
LSM4-201ENST00000252816 FNBP1LQ5T0N5 605 aa22.56■■□□□ 1.2
LSM4-201ENST00000252816 AGAP9Q5VTM2 703 aa22.56■■□□□ 1.2
LSM4-201ENST00000252816 WASH2PQ6VEQ5 465 aa22.56■■□□□ 1.2
LSM4-201ENST00000252816 FAM83HQ6ZRV2 1179 aaPredicted RBP22.56■■□□□ 1.2
LSM4-201ENST00000252816 CLEC14AQ86T13 490 aa22.56■■□□□ 1.2
LSM4-201ENST00000252816 AMZ2Q86W34 360 aa22.56■■□□□ 1.2
LSM4-201ENST00000252816 BEND7Q8N7W2 519 aaPredicted RBP22.56■■□□□ 1.2
LSM4-201ENST00000252816 CCDC89Q8N998 374 aa22.56■■□□□ 1.2
LSM4-201ENST00000252816 RCBTB1Q8NDN9 531 aa22.56■■□□□ 1.2
LSM4-201ENST00000252816 OR4D9Q8NGE8 314 aa22.56■■□□□ 1.2
LSM4-201ENST00000252816 SH3KBP1Q96B97 665 aa22.56■■□□□ 1.2
LSM4-201ENST00000252816 CRELD1Q96HD1 420 aa22.56■■□□□ 1.2
LSM4-201ENST00000252816 NAF1Q96HR8 494 aaKnown RBP22.56■■□□□ 1.2
LSM4-201ENST00000252816 CCDC74BQ96LY2 380 aa22.56■■□□□ 1.2
LSM4-201ENST00000252816 TBC1D10AQ9BXI6 508 aa22.56■■□□□ 1.2
LSM4-201ENST00000252816 STN1Q9H668 368 aaKnown RBP22.56■■□□□ 1.2
LSM4-201ENST00000252816 WASH6PQ9NQA3 447 aa22.56■■□□□ 1.2
LSM4-201ENST00000252816 NLE1Q9NVX2 485 aaPredicted RBP22.56■■□□□ 1.2
LSM4-201ENST00000252816 PAK5Q9P286 719 aa22.56■■□□□ 1.2
LSM4-201ENST00000252816 PISDQ9UG56 409 aa22.56■■□□□ 1.2
LSM4-201ENST00000252816 CRLS1Q9UJA2 301 aa22.56■■□□□ 1.2
LSM4-201ENST00000252816 LHX6Q9UPM6 363 aa22.56■■□□□ 1.2
LSM4-201ENST00000252816 DRG1Q9Y295 367 aaKnown RBP22.56■■□□□ 1.2
LSM4-201ENST00000252816 ADAMTS20P59510 1910 aa22.56■■□□□ 1.2
LSM4-201ENST00000252816 PRAMEF33A0A0G2JMD5 474 aa22.55■■□□□ 1.2
LSM4-201ENST00000252816 MROH6A6NGR9 719 aa22.55■■□□□ 1.2
LSM4-201ENST00000252816 OR52A4PA6NMU1 304 aa22.55■■□□□ 1.2
LSM4-201ENST00000252816 SGTAO43765 313 aa22.55■■□□□ 1.2
LSM4-201ENST00000252816 VCLP18206 1134 aa22.55■■□□□ 1.2
LSM4-201ENST00000252816 ITIH1P19827 911 aa22.55■■□□□ 1.2
LSM4-201ENST00000252816 ITGALP20701 1170 aa22.55■■□□□ 1.2
LSM4-201ENST00000252816 IDSP22304 550 aa22.55■■□□□ 1.2
LSM4-201ENST00000252816 ETV5P41161 510 aa22.55■■□□□ 1.2
LSM4-201ENST00000252816 MLLT3P42568 568 aaPredicted RBP22.55■■□□□ 1.2
LSM4-201ENST00000252816 KCNJ1P48048 391 aa22.55■■□□□ 1.2
LSM4-201ENST00000252816 CLCA4Q14CN2 919 aa22.55■■□□□ 1.2
LSM4-201ENST00000252816 KCTD19Q17RG1 926 aaPredicted RBP22.55■■□□□ 1.2
LSM4-201ENST00000252816 CCDC38Q502W7 563 aa22.55■■□□□ 1.2
LSM4-201ENST00000252816 LRRC69Q6ZNQ3 347 aa22.55■■□□□ 1.2
LSM4-201ENST00000252816 SNX20Q7Z614 316 aa22.55■■□□□ 1.2
LSM4-201ENST00000252816 NXPE1Q8N323 547 aa22.55■■□□□ 1.2
LSM4-201ENST00000252816 ZNF248Q8NDW4 579 aa22.55■■□□□ 1.2
LSM4-201ENST00000252816 OR10G6Q8NH81 332 aa22.55■■□□□ 1.2
LSM4-201ENST00000252816 STYXQ8WUJ0 223 aa22.55■■□□□ 1.2
LSM4-201ENST00000252816 MAIP1Q8WWC4 291 aa22.55■■□□□ 1.2
LSM4-201ENST00000252816 ULK4Q96C45 1275 aa22.55■■□□□ 1.2
LSM4-201ENST00000252816 AHCYL2Q96HN2 611 aaKnown RBP22.55■■□□□ 1.2
LSM4-201ENST00000252816 DNMT3AQ9Y6K1 912 aaPredicted RBP22.55■■□□□ 1.2
LSM4-201ENST00000252816 CCDC78A2IDD5 438 aa22.54■■□□□ 1.2
LSM4-201ENST00000252816 H7C0S8 307 aa22.54■■□□□ 1.2
LSM4-201ENST00000252816 DUX1O43812 170 aa22.54■■□□□ 1.2
LSM4-201ENST00000252816 KCNJ13O60928 360 aa22.54■■□□□ 1.2
LSM4-201ENST00000252816 JMJD7P0C870 316 aa22.54■■□□□ 1.2
LSM4-201ENST00000252816 PRSS56P0CW18 603 aa22.54■■□□□ 1.2
LSM4-201ENST00000252816 THRAP10827 490 aa22.54■■□□□ 1.2
LSM4-201ENST00000252816 PSMA3P25788 255 aa22.54■■□□□ 1.2
LSM4-201ENST00000252816 PBLDP30039 288 aaPredicted RBP22.54■■□□□ 1.2
LSM4-201ENST00000252816 ABCG1P45844 678 aa22.54■■□□□ 1.2
LSM4-201ENST00000252816 LMAN1P49257 510 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms