RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 FOXM1Q08050 763 aa20.7■□□□□ 0.9
NEDD8-201ENST00000250495 MAP7Q14244 749 aa20.7■□□□□ 0.9
NEDD8-201ENST00000250495 LLGL1Q15334 1064 aa20.7■□□□□ 0.9
NEDD8-201ENST00000250495 KHDC1Q4VXA5 237 aaKnown RBP20.7■□□□□ 0.9
NEDD8-201ENST00000250495 SIRPB2Q5JXA9 342 aa20.7■□□□□ 0.9
NEDD8-201ENST00000250495 ZC3H18Q86VM9 953 aaKnown RBP20.7■□□□□ 0.9
NEDD8-201ENST00000250495 TTC30BQ8N4P2 665 aa20.7■□□□□ 0.9
NEDD8-201ENST00000250495 SLC25A41Q8N5S1 370 aa20.7■□□□□ 0.9
NEDD8-201ENST00000250495 ESX1Q8N693 406 aa20.7■□□□□ 0.9
NEDD8-201ENST00000250495 TGM7Q96PF1 710 aa20.7■□□□□ 0.9
NEDD8-201ENST00000250495 SLC40A1Q9NP59 571 aa20.7■□□□□ 0.9
NEDD8-201ENST00000250495 SIDT1Q9NXL6 827 aaKnown RBP20.7■□□□□ 0.9
NEDD8-201ENST00000250495 IL17CQ9P0M4 197 aa20.7■□□□□ 0.9
NEDD8-201ENST00000250495 IL17BQ9UHF5 180 aa20.7■□□□□ 0.9
NEDD8-201ENST00000250495 TUBD1Q9UJT1 453 aa20.7■□□□□ 0.9
NEDD8-201ENST00000250495 TLN1Q9Y490 2541 aaKnown RBP20.7■□□□□ 0.9
NEDD8-201ENST00000250495 SETXQ7Z333 2677 aaKnown RBP20.69■□□□□ 0.9
NEDD8-201ENST00000250495 HACD1B0YJ81 288 aa20.69■□□□□ 0.9
NEDD8-201ENST00000250495 NKX2-8O15522 239 aa20.69■□□□□ 0.9
NEDD8-201ENST00000250495 SPAM1P38567 509 aa20.69■□□□□ 0.9
NEDD8-201ENST00000250495 HALP42357 657 aa20.69■□□□□ 0.9
NEDD8-201ENST00000250495 DRG2P55039 364 aaKnown RBP20.69■□□□□ 0.9
NEDD8-201ENST00000250495 POLE2P56282 527 aa20.69■□□□□ 0.9
NEDD8-201ENST00000250495 NFKB2Q00653 900 aa20.69■□□□□ 0.9
NEDD8-201ENST00000250495 MPP3Q13368 585 aa20.69■□□□□ 0.9
NEDD8-201ENST00000250495 LDLRAP1Q5SW96 308 aa20.69■□□□□ 0.9
NEDD8-201ENST00000250495 C11orf96Q7Z7L8 435 aa20.69■□□□□ 0.9
NEDD8-201ENST00000250495 AMZ2Q86W34 360 aa20.69■□□□□ 0.9
NEDD8-201ENST00000250495 KATNAL2Q8IYT4 538 aa20.69■□□□□ 0.9
NEDD8-201ENST00000250495 ZNF567Q8N184 647 aa20.69■□□□□ 0.9
NEDD8-201ENST00000250495 ZDHHC12Q96GR4 267 aa20.69■□□□□ 0.9
NEDD8-201ENST00000250495 MRGPRX2Q96LB1 330 aa20.69■□□□□ 0.9
NEDD8-201ENST00000250495 ZCCHC2Q9C0B9 1178 aaKnown RBP20.69■□□□□ 0.9
NEDD8-201ENST00000250495 TRIM10Q9UDY6 481 aa20.69■□□□□ 0.9
NEDD8-201ENST00000250495 TRHDEQ9UKU6 1024 aa20.69■□□□□ 0.9
NEDD8-201ENST00000250495 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.69■□□□□ 0.9
NEDD8-201ENST00000250495 DNMT3AQ9Y6K1 912 aaPredicted RBP20.69■□□□□ 0.9
NEDD8-201ENST00000250495 TENM4Q6N022 2769 aa20.68■□□□□ 0.9
NEDD8-201ENST00000250495 hCG_1818297A0A087WSY0 165 aa20.68■□□□□ 0.9
NEDD8-201ENST00000250495 OR52A4PA6NMU1 304 aa20.68■□□□□ 0.9
NEDD8-201ENST00000250495 TERTO14746 1132 aaKnown RBP20.68■□□□□ 0.9
NEDD8-201ENST00000250495 RASSF9O75901 435 aa20.68■□□□□ 0.9
NEDD8-201ENST00000250495 DLGAP3O95886 979 aa20.68■□□□□ 0.9
NEDD8-201ENST00000250495 HLA-DPA1P20036 260 aa20.68■□□□□ 0.9
NEDD8-201ENST00000250495 SEPHS1P49903 392 aa20.68■□□□□ 0.9
NEDD8-201ENST00000250495 ADCY2Q08462 1091 aa20.68■□□□□ 0.9
NEDD8-201ENST00000250495 TBX2Q13207 712 aaPredicted RBP20.68■□□□□ 0.9
NEDD8-201ENST00000250495 KCNAB2Q13303 367 aa20.68■□□□□ 0.9
NEDD8-201ENST00000250495 ITGA9Q13797 1035 aa20.68■□□□□ 0.9
NEDD8-201ENST00000250495 IL11RAQ14626 422 aa20.68■□□□□ 0.9
NEDD8-201ENST00000250495 SLC1A5Q15758 541 aa20.68■□□□□ 0.9
NEDD8-201ENST00000250495 PPP2R5EQ16537 467 aa20.68■□□□□ 0.9
NEDD8-201ENST00000250495 GLT6D1Q7Z4J2 308 aa20.68■□□□□ 0.9
NEDD8-201ENST00000250495 CCDC50Q8IVM0 306 aa20.68■□□□□ 0.9
NEDD8-201ENST00000250495 UNC5BQ8IZJ1 945 aa20.68■□□□□ 0.9
NEDD8-201ENST00000250495 RNF214Q8ND24 703 aa20.68■□□□□ 0.9
NEDD8-201ENST00000250495 BLOC1S5Q8TDH9 187 aa20.68■□□□□ 0.9
NEDD8-201ENST00000250495 RBM41Q96IZ5 413 aaKnown RBP20.68■□□□□ 0.9
NEDD8-201ENST00000250495 ZNF768Q9H5H4 540 aaKnown RBP20.68■□□□□ 0.9
NEDD8-201ENST00000250495 EPHA6Q9UF33 1036 aa20.68■□□□□ 0.9
NEDD8-201ENST00000250495 PKP3Q9Y446 797 aa20.68■□□□□ 0.9
NEDD8-201ENST00000250495 GLYATL1P3A0A0U1RQE8 302 aa20.67■□□□□ 0.9
NEDD8-201ENST00000250495 UGT1A9O60656 530 aa20.67■□□□□ 0.9
NEDD8-201ENST00000250495 POP7O75817 140 aaKnown RBP20.67■□□□□ 0.9
NEDD8-201ENST00000250495 UGT1A6P19224 532 aa20.67■□□□□ 0.9
NEDD8-201ENST00000250495 UGT1A1P22309 533 aa20.67■□□□□ 0.9
NEDD8-201ENST00000250495 UGT1A4P22310 534 aa20.67■□□□□ 0.9
NEDD8-201ENST00000250495 CHRNA4P43681 627 aa20.67■□□□□ 0.9
NEDD8-201ENST00000250495 CAPZBP47756 277 aa20.67■□□□□ 0.9
NEDD8-201ENST00000250495 LEPRP48357 1165 aaKnown RBP20.67■□□□□ 0.9
NEDD8-201ENST00000250495 GPR18Q14330 331 aa20.67■□□□□ 0.9
NEDD8-201ENST00000250495 NOMO1Q15155 1222 aa20.67■□□□□ 0.9
NEDD8-201ENST00000250495 CHRNA6Q15825 494 aa20.67■□□□□ 0.9
NEDD8-201ENST00000250495 CRTC2Q53ET0 693 aaPredicted RBP20.67■□□□□ 0.9
NEDD8-201ENST00000250495 CACHD1Q5VU97 1274 aa20.67■□□□□ 0.9
NEDD8-201ENST00000250495 IPMKQ8NFU5 416 aa20.67■□□□□ 0.9
NEDD8-201ENST00000250495 OXNAD1Q96HP4 312 aaPredicted RBP20.67■□□□□ 0.9
NEDD8-201ENST00000250495 ULBP3Q9BZM4 244 aa20.67■□□□□ 0.9
NEDD8-201ENST00000250495 RAB33BQ9H082 229 aa20.67■□□□□ 0.9
NEDD8-201ENST00000250495 UGT1A7Q9HAW7 530 aa20.67■□□□□ 0.9
NEDD8-201ENST00000250495 UGT1A10Q9HAW8 530 aa20.67■□□□□ 0.9
NEDD8-201ENST00000250495 UGT1A8Q9HAW9 530 aa20.67■□□□□ 0.9
NEDD8-201ENST00000250495 ASH1LQ9NR48 2969 aaKnown RBP20.67■□□□□ 0.9
NEDD8-201ENST00000250495 MYO18BQ8IUG5 2567 aa20.67■□□□□ 0.9
NEDD8-201ENST00000250495 PRKAR1AP10644 381 aa20.66■□□□□ 0.9
NEDD8-201ENST00000250495 TCN2P20062 427 aa20.66■□□□□ 0.9
NEDD8-201ENST00000250495 STAT5AP42229 794 aa20.66■□□□□ 0.9
NEDD8-201ENST00000250495 DMPKQ09013 629 aa20.66■□□□□ 0.9
NEDD8-201ENST00000250495 CDC20Q12834 499 aa20.66■□□□□ 0.9
NEDD8-201ENST00000250495 XRCC4Q13426 336 aa20.66■□□□□ 0.9
NEDD8-201ENST00000250495 CYB5D1Q6P9G0 228 aa20.66■□□□□ 0.9
NEDD8-201ENST00000250495 TMEM220Q6QAJ8 160 aa20.66■□□□□ 0.9
NEDD8-201ENST00000250495 C6orf15Q6UXA7 325 aaPredicted RBP20.66■□□□□ 0.9
NEDD8-201ENST00000250495 FAM151BQ6UXP7 276 aa20.66■□□□□ 0.9
NEDD8-201ENST00000250495 PRSS42Q7Z5A4 293 aa20.66■□□□□ 0.9
NEDD8-201ENST00000250495 RASGEF1AQ8N9B8 481 aa20.66■□□□□ 0.9
NEDD8-201ENST00000250495 DDHD1Q8NEL9 900 aa20.66■□□□□ 0.9
NEDD8-201ENST00000250495 RSC1A1Q92681 617 aa20.66■□□□□ 0.9
NEDD8-201ENST00000250495 HAUS1Q96CS2 278 aa20.66■□□□□ 0.9
NEDD8-201ENST00000250495 QKIQ96PU8 341 aaKnown RBP eCLIP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms