RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 COMMD8Q9NX08 183 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 FADS3Q9Y5Q0 445 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 TTC24A2A3L6 582 aaPredicted RBP16.82■□□□□ 0.28
FOXA1-201ENST00000250448 EI24O14681 340 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 TSPAN3O60637 253 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 GPIP06744 558 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 FCGR1AP12314 374 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 CHRM3P20309 590 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 SH3BP2P78314 561 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 GRB7Q14451 532 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 GPR107Q5VW38 600 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 PSRC1Q6PGN9 363 aaPredicted RBP16.82■□□□□ 0.28
FOXA1-201ENST00000250448 GALNT7Q86SF2 657 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 PIM3Q86V86 326 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 TRPV3Q8NET8 790 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 GIPC3Q8TF64 312 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 BORCS5Q969J3 196 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 PTERQ96BW5 349 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 POLR1BQ9H9Y6 1135 aa16.82■□□□□ 0.28
FOXA1-201ENST00000250448 ANAPC1Q9H1A4 1944 aa16.81■□□□□ 0.28
FOXA1-201ENST00000250448 J3KR12 359 aa16.81■□□□□ 0.28
FOXA1-201ENST00000250448 FOXD2O60548 495 aaPredicted RBP16.81■□□□□ 0.28
FOXA1-201ENST00000250448 TACR2P21452 398 aa16.81■□□□□ 0.28
FOXA1-201ENST00000250448 CAPGP40121 348 aa16.81■□□□□ 0.28
FOXA1-201ENST00000250448 SLC26A3P40879 764 aa16.81■□□□□ 0.28
FOXA1-201ENST00000250448 SERPINH1P50454 418 aaKnown RBP16.81■□□□□ 0.28
FOXA1-201ENST00000250448 SGSHP51688 502 aa16.81■□□□□ 0.28
FOXA1-201ENST00000250448 RPS24P62847 133 aaKnown RBP16.81■□□□□ 0.28
FOXA1-201ENST00000250448 GEN1Q17RS7 908 aa16.81■□□□□ 0.28
FOXA1-201ENST00000250448 AARS2Q5JTZ9 985 aaKnown RBP16.81■□□□□ 0.28
FOXA1-201ENST00000250448 TMEM26Q6ZUK4 368 aa16.81■□□□□ 0.28
FOXA1-201ENST00000250448 LDB1Q86U70 411 aaPredicted RBP16.81■□□□□ 0.28
FOXA1-201ENST00000250448 PHYKPLQ8IUZ5 450 aa16.81■□□□□ 0.28
FOXA1-201ENST00000250448 ARL14EPQ8N8R7 260 aaPredicted RBP16.81■□□□□ 0.28
FOXA1-201ENST00000250448 OR13J1Q8NGT2 312 aa16.81■□□□□ 0.28
FOXA1-201ENST00000250448 LRRC58Q96CX6 371 aa16.81■□□□□ 0.28
FOXA1-201ENST00000250448 KLHL5Q96PQ7 755 aa16.81■□□□□ 0.28
FOXA1-201ENST00000250448 SH3GLB1Q9Y371 365 aa16.81■□□□□ 0.28
FOXA1-201ENST00000250448 BPTFQ12830 3046 aa16.81■□□□□ 0.28
FOXA1-201ENST00000250448 MYO9BQ13459 2157 aa16.81■□□□□ 0.28
FOXA1-201ENST00000250448 SZT2Q5T011 3432 aa16.81■□□□□ 0.28
FOXA1-201ENST00000250448 A0A1W2PPW3 197 aa16.81■□□□□ 0.28
FOXA1-201ENST00000250448 ATP6V1G1O75348 118 aa16.81■□□□□ 0.28
FOXA1-201ENST00000250448 CDK14O94921 469 aa16.81■□□□□ 0.28
FOXA1-201ENST00000250448 CORO1AP31146 461 aaKnown RBP16.81■□□□□ 0.28
FOXA1-201ENST00000250448 YBX1P67809 324 aaKnown RBP16.81■□□□□ 0.28
FOXA1-201ENST00000250448 C9orf50Q5SZB4 431 aa16.81■□□□□ 0.28
FOXA1-201ENST00000250448 DHRSXQ8N5I4 330 aa16.81■□□□□ 0.28
FOXA1-201ENST00000250448 PTGR2Q8N8N7 351 aaPredicted RBP16.81■□□□□ 0.28
FOXA1-201ENST00000250448 PDZD8Q8NEN9 1154 aa16.81■□□□□ 0.28
FOXA1-201ENST00000250448 BHMTQ93088 406 aa16.81■□□□□ 0.28
FOXA1-201ENST00000250448 PSMG2Q969U7 264 aa16.81■□□□□ 0.28
FOXA1-201ENST00000250448 MID1IP1Q9NPA3 183 aa16.81■□□□□ 0.28
FOXA1-201ENST00000250448 SMPD3Q9NY59 655 aaPredicted RBP16.81■□□□□ 0.28
FOXA1-201ENST00000250448 AZIN1O14977 448 aa16.8■□□□□ 0.28
FOXA1-201ENST00000250448 CLASP2O75122 1294 aaKnown RBP16.8■□□□□ 0.28
FOXA1-201ENST00000250448 STC2O76061 302 aa16.8■□□□□ 0.28
FOXA1-201ENST00000250448 MATN4O95460 622 aa16.8■□□□□ 0.28
FOXA1-201ENST00000250448 ZNF24P17028 368 aa16.8■□□□□ 0.28
FOXA1-201ENST00000250448 IRS1P35568 1242 aa16.8■□□□□ 0.28
FOXA1-201ENST00000250448 ZXDBP98169 803 aa16.8■□□□□ 0.28
FOXA1-201ENST00000250448 FOXM1Q08050 763 aa16.8■□□□□ 0.28
FOXA1-201ENST00000250448 SFSWAPQ12872 951 aaKnown RBP16.8■□□□□ 0.28
FOXA1-201ENST00000250448 CYP51A1Q16850 503 aa16.8■□□□□ 0.28
FOXA1-201ENST00000250448 DDIASQ8IXT1 998 aa16.8■□□□□ 0.28
FOXA1-201ENST00000250448 TBC1D15Q8TC07 691 aa16.8■□□□□ 0.28
FOXA1-201ENST00000250448 POF1BQ8WVV4 589 aa16.8■□□□□ 0.28
FOXA1-201ENST00000250448 C17orf50Q8WW18 174 aa16.8■□□□□ 0.28
FOXA1-201ENST00000250448 ASB2Q96Q27 587 aa16.8■□□□□ 0.28
FOXA1-201ENST00000250448 ARNT2Q9HBZ2 717 aa16.8■□□□□ 0.28
FOXA1-201ENST00000250448 CCL16O15467 120 aa16.8■□□□□ 0.28
FOXA1-201ENST00000250448 CBFA2T3O75081 653 aa16.8■□□□□ 0.28
FOXA1-201ENST00000250448 C8AP07357 584 aa16.8■□□□□ 0.28
FOXA1-201ENST00000250448 MBL2P11226 248 aaPredicted RBP16.8■□□□□ 0.28
FOXA1-201ENST00000250448 MTHFD1P11586 935 aaKnown RBP16.8■□□□□ 0.28
FOXA1-201ENST00000250448 GABRR2P28476 465 aa16.8■□□□□ 0.28
FOXA1-201ENST00000250448 BMPR1AP36894 532 aa16.8■□□□□ 0.28
FOXA1-201ENST00000250448 ACVRL1P37023 503 aa16.8■□□□□ 0.28
FOXA1-201ENST00000250448 NAA20P61599 178 aa16.8■□□□□ 0.28
FOXA1-201ENST00000250448 KANK2Q63ZY3 851 aa16.8■□□□□ 0.28
FOXA1-201ENST00000250448 OR52K2Q8NGK3 314 aa16.8■□□□□ 0.28
FOXA1-201ENST00000250448 TRIM8Q9BZR9 551 aa16.8■□□□□ 0.28
FOXA1-201ENST00000250448 PAIP1Q9H074 479 aaKnown RBP16.8■□□□□ 0.28
FOXA1-201ENST00000250448 SLC25A51Q9H1U9 297 aa16.8■□□□□ 0.28
FOXA1-201ENST00000250448 MUC13Q9H3R2 512 aa16.8■□□□□ 0.28
FOXA1-201ENST00000250448 CERS4Q9HA82 394 aa16.8■□□□□ 0.28
FOXA1-201ENST00000250448 IL21Q9HBE4 155 aa16.8■□□□□ 0.28
FOXA1-201ENST00000250448 HCFC1R1Q9NWW0 138 aa16.8■□□□□ 0.28
FOXA1-201ENST00000250448 FNIP2Q9P278 1114 aa16.8■□□□□ 0.28
FOXA1-201ENST00000250448 PCDHA9Q9Y5H5 950 aa16.8■□□□□ 0.28
FOXA1-201ENST00000250448 ACTL7AQ9Y615 435 aa16.8■□□□□ 0.28
FOXA1-201ENST00000250448 TRANK1O15050 2925 aa16.8■□□□□ 0.28
FOXA1-201ENST00000250448 PRRC2BQ5JSZ5 2229 aaKnown RBP16.8■□□□□ 0.28
FOXA1-201ENST00000250448 ZFC3H1O60293 1989 aaKnown RBP16.8■□□□□ 0.28
FOXA1-201ENST00000250448 LINC01553A4QN01 128 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 BOLA2-SMG1P6H3BVE0 249 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 CCL22O00626 93 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 PPP6CO00743 305 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 INPP4BO15327 924 aa16.79■□□□□ 0.28
FOXA1-201ENST00000250448 SLC7A4O43246 635 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms