RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 ANKFN1Q8N957 763 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 TSPEARQ8WU66 669 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 EPB41L1Q9H4G0 881 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 MAGEE1Q9HCI5 957 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 SLAMF8Q9P0V8 285 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 DNMT3BQ9UBC3 853 aaKnown RBP19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 AURKCQ9UQB9 309 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 ST14Q9Y5Y6 855 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 SLC30A1Q9Y6M5 507 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 SMIM31A0A1B0GVY4 71 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 AQP12BA6NM10 295 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 SOCS2O14508 198 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 PRMT5O14744 637 aaPredicted RBP19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 GIPC1O14908 333 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 SLC22A3O75751 556 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 CXCL10P02778 98 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 BMP2P12643 396 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 UGT1A6P19224 532 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 ERVK-8P63133 956 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 TXNL4AP83876 142 aaKnown RBP19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 CREB5Q02930 508 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 PRKCQQ04759 706 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 FOXM1Q08050 763 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 BNIP2Q12982 314 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 TPGS2Q68CL5 300 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 SBSNQ6UWP8 590 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 FAM151BQ6UXP7 276 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 AQP12AQ8IXF9 295 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 APCDD1Q8J025 514 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 STK40Q8N2I9 435 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 SLAIN1Q8ND83 568 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 MYO19Q96H55 970 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 BOCQ9BWV1 1114 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 OSBPL11Q9BXB4 747 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 MRPS26Q9BYN8 205 aaKnown RBP19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 NUDT4Q9NZJ9 180 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 ACTR3BQ9P1U1 418 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 TMCO1Q9UM00 188 aa19.3■□□□□ 0.68
CDC42EP1-201ENST00000249014 DHRS12A0PJE2 317 aa19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 GFRA2O00451 464 aa19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 ARPC2O15144 300 aa19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 SMAD6O43541 496 aaKnown RBP19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 EEDO75530 441 aaKnown RBP19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 PGLSO95336 258 aa19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 SOD2P04179 222 aa19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 OXTRP30559 389 aa19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 HTR6P50406 440 aa19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 APOFQ13790 326 aa19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 TBCELQ5QJ74 424 aa19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 ARMC12Q5T9G4 340 aa19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 KIAA2013Q8IYS2 634 aa19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 ARL14EPQ8N8R7 260 aaPredicted RBP19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 TTC16Q8NEE8 873 aa19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 PDLIM5Q96HC4 596 aaKnown RBP19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 TRIM54Q9BYV2 358 aa19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 ZNF334Q9HCZ1 680 aaPredicted RBP19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 CCDC154A6NI56 674 aa19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 MYCP01106 439 aaPredicted RBP19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 GKP32189 559 aa19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 POLR2JP52435 117 aaKnown RBP19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 CDH18Q13634 790 aa19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 VEPH1Q14D04 833 aa19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 NADK2Q4G0N4 442 aa19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 PDCD4Q53EL6 469 aaKnown RBP19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 ZBTB49Q6ZSB9 765 aa19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 SERPINA9Q86WD7 417 aa19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 CARM1Q86X55 608 aa19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 FNDC5Q8NAU1 212 aa19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 HJURPQ8NCD3 748 aaPredicted RBP19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 PROKR1Q8TCW9 393 aa19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 LKAAEAR1Q8TD35 194 aa19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 HBEGFQ99075 208 aa19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 CFHR5Q9BXR6 569 aa19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 CIPCQ9C0C6 399 aa19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 GRIP2Q9C0E4 1043 aa19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 HIPK3Q9H422 1215 aa19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 DUS2Q9NX74 493 aaKnown RBP19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 PLK2Q9NYY3 685 aa19.29■□□□□ 0.68
CDC42EP1-201ENST00000249014 FAM149AA5PLN7 773 aa19.28■□□□□ 0.68
CDC42EP1-201ENST00000249014 OR7A17O14581 309 aa19.28■□□□□ 0.68
CDC42EP1-201ENST00000249014 PRRG1O14668 218 aa19.28■□□□□ 0.68
CDC42EP1-201ENST00000249014 HTRA2O43464 458 aaPredicted RBP19.28■□□□□ 0.68
CDC42EP1-201ENST00000249014 PRAMEF1O95521 474 aa19.28■□□□□ 0.68
CDC42EP1-201ENST00000249014 CAPN1P07384 714 aa19.28■□□□□ 0.68
CDC42EP1-201ENST00000249014 MTHFD1P11586 935 aaKnown RBP19.28■□□□□ 0.68
CDC42EP1-201ENST00000249014 ITGB6P18564 788 aa19.28■□□□□ 0.68
CDC42EP1-201ENST00000249014 GSK3BP49841 420 aa19.28■□□□□ 0.68
CDC42EP1-201ENST00000249014 CLCN2P51788 898 aa19.28■□□□□ 0.68
CDC42EP1-201ENST00000249014 FUT11Q495W5 492 aa19.28■□□□□ 0.68
CDC42EP1-201ENST00000249014 TIGD2Q4W5G0 525 aa19.28■□□□□ 0.68
CDC42EP1-201ENST00000249014 TXNDC8Q6A555 127 aa19.28■□□□□ 0.68
CDC42EP1-201ENST00000249014 PPP4R4Q6NUP7 873 aa19.28■□□□□ 0.68
CDC42EP1-201ENST00000249014 FRA10AC1Q70Z53 315 aa19.28■□□□□ 0.68
CDC42EP1-201ENST00000249014 GOLGA7Q7Z5G4 137 aa19.28■□□□□ 0.68
CDC42EP1-201ENST00000249014 IFNEQ86WN2 208 aa19.28■□□□□ 0.68
CDC42EP1-201ENST00000249014 SFRP1Q8N474 314 aa19.28■□□□□ 0.68
CDC42EP1-201ENST00000249014 TMEM199Q8N511 208 aa19.28■□□□□ 0.68
CDC42EP1-201ENST00000249014 RPL10LQ96L21 214 aaKnown RBP19.28■□□□□ 0.68
CDC42EP1-201ENST00000249014 TMEM74Q96NL1 305 aa19.28■□□□□ 0.68
CDC42EP1-201ENST00000249014 TRIM15Q9C019 465 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms