RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 VOPP1Q96AW1 172 aa13.07□□□□□ -0.32
SLIRP-201ENST00000238688 FAR2Q96K12 515 aa13.07□□□□□ -0.32
SLIRP-201ENST00000238688 ACOX2Q99424 681 aa13.07□□□□□ -0.32
SLIRP-201ENST00000238688 OLFM1Q99784 485 aa13.07□□□□□ -0.32
SLIRP-201ENST00000238688 P2RY12Q9H244 342 aa13.07□□□□□ -0.32
SLIRP-201ENST00000238688 SLCO1B3Q9NPD5 702 aa13.07□□□□□ -0.32
SLIRP-201ENST00000238688 LATS2Q9NRM7 1088 aa13.07□□□□□ -0.32
SLIRP-201ENST00000238688 IGSF5Q9NSI5 407 aa13.07□□□□□ -0.32
SLIRP-201ENST00000238688 THAP10Q9P2Z0 257 aaPredicted RBP13.07□□□□□ -0.32
SLIRP-201ENST00000238688 PCDHGA5Q9Y5G8 931 aa13.07□□□□□ -0.32
SLIRP-201ENST00000238688 CACNA1EQ15878 2313 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 NUMA1Q14980 2115 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 IGLV3-16A0A075B6K0 115 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 WDR91A4D1P6 747 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 TBC1D3BA6NDS4 549 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 NPIPB15A6NHN6 443 aaPredicted RBP13.06□□□□□ -0.32
SLIRP-201ENST00000238688 CFAP99D6REC4 459 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 C1QTNF3-AMACRE9PGA6 284 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 KPNA5O15131 536 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 MAGEC1O60732 1142 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 DNAJC6O75061 913 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 LEFTY1O75610 366 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 RHOBTB1O94844 696 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 CCDC166P0CW27 439 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 TPBGLP0DKB5 382 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 CBSLP0DN79 551 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 ALOX15P16050 662 aaPredicted RBP13.06□□□□□ -0.32
SLIRP-201ENST00000238688 BPIP17213 487 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 KCNA4P22459 653 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 ACRV1P26436 265 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 CBSP35520 551 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 MPLP40238 635 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 P2RY2P41231 377 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 SLC1A6P48664 564 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 SPINT3P49223 89 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 HNRNPH2P55795 449 aaKnown RBP13.06□□□□□ -0.32
SLIRP-201ENST00000238688 ABCE1P61221 599 aaKnown RBP13.06□□□□□ -0.32
SLIRP-201ENST00000238688 PRKAA1Q13131 559 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 ENPP2Q13822 863 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 MAP7D1Q3KQU3 841 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 FNDC3BQ53EP0 1204 aaKnown RBP13.06□□□□□ -0.32
SLIRP-201ENST00000238688 EGFLAMQ63HQ2 1017 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 LRRC66Q68CR7 880 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 TCEAL6Q6IPX3 200 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 CGB2Q6NT52 195 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 METTL2BQ6P1Q9 378 aaKnown RBP13.06□□□□□ -0.32
SLIRP-201ENST00000238688 ZNF549Q6P9A3 640 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 C10orf107Q8IVU9 208 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 PLD6Q8N2A8 252 aaKnown RBP13.06□□□□□ -0.32
SLIRP-201ENST00000238688 NXPE1Q8N323 547 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 TMEM151AQ8N4L1 468 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 OR6K2Q8NGY2 324 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 STAG3L4Q8TBR4 150 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 KCTD4Q8WVF5 259 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 C10orf82Q8WW14 230 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 RLN3Q8WXF3 142 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 CCT6BQ92526 530 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 TCEAL3Q969E4 200 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 KIAA1191Q96A73 305 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 SCYL1Q96KG9 808 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 CNDP1Q96KN2 507 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 KLHL32Q96NJ5 620 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 BIRC8Q96P09 236 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 LRRC37BQ96QE4 947 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 PANX3Q96QZ0 392 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 ZSCAN5AQ9BUG6 496 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 DRC3Q9H069 523 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 TMEM245Q9H330 911 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 EML4Q9HC35 981 aaKnown RBP13.06□□□□□ -0.32
SLIRP-201ENST00000238688 IL26Q9NPH9 171 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 XPR1Q9UBH6 696 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 VTI1BQ9UEU0 232 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 MBD1Q9UIS9 605 aaPredicted RBP13.06□□□□□ -0.32
SLIRP-201ENST00000238688 CRLS1Q9UJA2 301 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 TRMT6Q9UJA5 497 aaKnown RBP13.06□□□□□ -0.32
SLIRP-201ENST00000238688 CRYL1Q9Y2S2 319 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 ACACBO00763 2458 aa13.06□□□□□ -0.32
SLIRP-201ENST00000238688 KNL1Q8NG31 2342 aa13.05□□□□□ -0.32
SLIRP-201ENST00000238688 A0A1W2PQF6 199 aa13.05□□□□□ -0.32
SLIRP-201ENST00000238688 UBA6A0AVT1 1052 aaPredicted RBP13.05□□□□□ -0.32
SLIRP-201ENST00000238688 OR51F1A6NGY5 319 aa13.05□□□□□ -0.32
SLIRP-201ENST00000238688 E5RI56 91 aa13.05□□□□□ -0.32
SLIRP-201ENST00000238688 SMIM24O75264 130 aa13.05□□□□□ -0.32
SLIRP-201ENST00000238688 IPO13O94829 963 aaKnown RBP13.05□□□□□ -0.32
SLIRP-201ENST00000238688 AP2A2O94973 939 aa13.05□□□□□ -0.32
SLIRP-201ENST00000238688 CLDN7O95471 211 aa13.05□□□□□ -0.32
SLIRP-201ENST00000238688 GSTM1P09488 218 aa13.05□□□□□ -0.32
SLIRP-201ENST00000238688 ALPIP09923 528 aa13.05□□□□□ -0.32
SLIRP-201ENST00000238688 CTPS1P17812 591 aa13.05□□□□□ -0.32
SLIRP-201ENST00000238688 SAT1P21673 171 aa13.05□□□□□ -0.32
SLIRP-201ENST00000238688 MMP12P39900 470 aa13.05□□□□□ -0.32
SLIRP-201ENST00000238688 MAPK9P45984 424 aa13.05□□□□□ -0.32
SLIRP-201ENST00000238688 RGS4P49798 205 aa13.05□□□□□ -0.32
SLIRP-201ENST00000238688 ARFIP2P53365 341 aa13.05□□□□□ -0.32
SLIRP-201ENST00000238688 LIMK1P53667 647 aa13.05□□□□□ -0.32
SLIRP-201ENST00000238688 CDKN2DP55273 166 aa13.05□□□□□ -0.32
SLIRP-201ENST00000238688 IL2P60568 153 aa13.05□□□□□ -0.32
SLIRP-201ENST00000238688 IRF9Q00978 393 aa13.05□□□□□ -0.32
SLIRP-201ENST00000238688 CREB5Q02930 508 aa13.05□□□□□ -0.32
SLIRP-201ENST00000238688 GSTM4Q03013 218 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms