RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 PER2O15055 1255 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 CPNE3O75131 537 aaKnown RBP13.11□□□□□ -0.31
NEK9-201ENST00000238616 PAGE1O75459 146 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 RARAP10276 462 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 CHST9Q7L1S5 443 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 ARL10Q8N8L6 244 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 KBTBD8Q8NFY9 601 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 CCDC120Q96HB5 630 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 ZNF570Q96NI8 536 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 SRMSQ9H3Y6 488 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 MTRRQ9UBK8 725 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 PCDHGA6Q9Y5G7 932 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 A2ML1A8K2U0 1454 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 OR14I1A6ND48 311 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 WASHC1A8K0Z3 465 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 WASH3PC4AMC7 463 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 ITGB1P05556 798 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 PAEPP09466 180 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 FAM153BP0C7A2 387 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 ACVR2AP27037 513 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 RGS19P49795 217 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 DGKEP52429 567 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 WASH2PQ6VEQ5 465 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 GPR142Q7Z601 462 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 TREML1Q86YW5 311 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 C7orf57Q8NEG2 295 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 TBATAQ96M53 351 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 ERVK-18Q9QC07 812 aa13.11□□□□□ -0.31
NEK9-201ENST00000238616 KHNYNO15037 678 aaKnown RBP13.1□□□□□ -0.31
NEK9-201ENST00000238616 DHPSP49366 369 aaPredicted RBP13.1□□□□□ -0.31
NEK9-201ENST00000238616 RARRES1P49788 294 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 NFATC2Q13469 925 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 DENND5AQ6IQ26 1287 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 NOXRED1Q6NXP6 359 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 VITQ6UXI7 678 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 GALNT11Q8NCW6 608 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 FAM13CQ8NE31 585 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 POF1BQ8WVV4 589 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 MFSD14AQ96MC6 490 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 ZNF350Q9GZX5 532 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 TISP43B9A030 160 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 MT-CYBP00156 380 aaPredicted RBP13.1□□□□□ -0.31
NEK9-201ENST00000238616 MSL3P1P0C860 447 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 RASSF5Q8WWW0 418 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 MBOAT7Q96N66 472 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 VAT1Q99536 393 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 GLS2Q9UI32 602 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 PNPLA6Q8IY17 1366 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 PIK3C3Q8NEB9 887 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 TSSK3Q96PN8 268 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 ZSCAN5AQ9BUG6 496 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 PDP1Q9P0J1 537 aaPredicted RBP13.1□□□□□ -0.31
NEK9-201ENST00000238616 RGPD8O14715 1765 aaPredicted RBP13.1□□□□□ -0.31
NEK9-201ENST00000238616 SIGLEC16A6NMB1 481 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 B4DGG1 531 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 APOC4-APOC2K7ER74 178 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 CXCL11O14625 94 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 APOC2P02655 101 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 SLC35G6P0C7Q6 338 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 TIE1P35590 1138 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 CD47Q08722 323 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 ST3GAL1Q11201 340 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 KIAA0895Q8NCT3 520 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 GRHL3Q8TE85 626 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 TTPALQ9BTX7 342 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 ZNF20P17024 532 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 PTPRAP18433 802 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 CD247P20963 164 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 USF2Q15853 346 aaPredicted RBP13.1□□□□□ -0.31
NEK9-201ENST00000238616 SLC9B1Q4ZJI4 515 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 AKAP14Q86UN6 197 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 ALYREFQ86V81 257 aaKnown RBP13.1□□□□□ -0.31
NEK9-201ENST00000238616 TRMT2AQ8IZ69 625 aaKnown RBP13.1□□□□□ -0.31
NEK9-201ENST00000238616 ZCCHC9Q8N567 271 aaKnown RBP13.1□□□□□ -0.31
NEK9-201ENST00000238616 COPS8Q99627 209 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 PMF1-BGLAPU3KQ54 211 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 A0A1W2PQ67 120 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 A8MUI8 341 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 CBFA2T3O75081 653 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 GTF2IRD2BQ6EKJ0 949 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 TTI2Q6NXR4 508 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 GTF2IRD2Q86UP8 949 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 HOMEZQ8IX15 550 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 SPERTQ8NA61 448 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 SMG7Q92540 1137 aaKnown RBP13.1□□□□□ -0.31
NEK9-201ENST00000238616 HPF1Q9NWY4 346 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 FKBP7Q9Y680 259 aa13.1□□□□□ -0.31
NEK9-201ENST00000238616 OAZ2O95190 189 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 DHFRP00374 187 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 ZNF8P17098 575 aaPredicted RBP13.09□□□□□ -0.31
NEK9-201ENST00000238616 CLCN5P51795 746 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 LIPEQ05469 1076 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 PCBP2Q15366 365 aaKnown RBP eCLIP13.09□□□□□ -0.31
NEK9-201ENST00000238616 LDB1Q86U70 411 aaPredicted RBP13.09□□□□□ -0.31
NEK9-201ENST00000238616 MINDY2Q8NBR6 621 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 TMEM168Q9H0V1 697 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 MED28Q9H204 178 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 TBX1O43435 398 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 ANTXR2P58335 489 aa13.09□□□□□ -0.31
NEK9-201ENST00000238616 MFSD3Q96ES6 412 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms