RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 ARRDC2Q8TBH0 407 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 CCDC138Q96M89 665 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 TRIM62Q9BVG3 475 aa15.36■□□□□ 0.05
DDX55-201ENST00000238146 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.36■□□□□ 0.05
DDX55-201ENST00000238146 WASH4PA8MWX3 477 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 ENPP3O14638 875 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 AXIN1O15169 862 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 UGT2B11O75310 529 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 F2P00734 622 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 PRSS56P0CW18 603 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 AGXTP21549 392 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 YWHAHQ04917 246 aaPredicted RBP15.35■□□□□ 0.05
DDX55-201ENST00000238146 CD47Q08722 323 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 TRIM32Q13049 653 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 FRA10AC1Q70Z53 315 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 RBM23Q86U06 439 aaKnown RBP15.35■□□□□ 0.05
DDX55-201ENST00000238146 HS3ST5Q8IZT8 346 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 UMODL1-AS1Q8N2C9 162 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 BLOC1S5Q8TDH9 187 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 RDH12Q96NR8 316 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 DERL2Q9GZP9 239 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 HMG20AQ9NP66 347 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 AKIP1Q9NQ31 210 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 FAM50BQ9Y247 325 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 MED16Q9Y2X0 877 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 FAM32AQ9Y421 112 aaKnown RBP15.35■□□□□ 0.05
DDX55-201ENST00000238146 NCF1BA6NI72 391 aaPredicted RBP15.35■□□□□ 0.05
DDX55-201ENST00000238146 NCF1CA8MVU1 366 aaPredicted RBP15.35■□□□□ 0.05
DDX55-201ENST00000238146 CDC7O00311 574 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 NOBOXO60393 691 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 JRKO75564 520 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 GJB3O75712 270 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 CHEK2O96017 543 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 NCF1P14598 390 aaPredicted RBP15.35■□□□□ 0.05
DDX55-201ENST00000238146 GGT1P19440 569 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 NFKBIAP25963 317 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 TPD52P55327 224 aaPredicted RBP15.35■□□□□ 0.05
DDX55-201ENST00000238146 GABARAPL2P60520 117 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 ADAM17P78536 824 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 HABP4Q5JVS0 413 aaKnown RBP15.35■□□□□ 0.05
DDX55-201ENST00000238146 PIK3R6Q5UE93 754 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 ANKRD34AQ69YU3 496 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 PGBD5Q8N414 524 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 TTC30BQ8N4P2 665 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 FNDC5Q8NAU1 212 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 NUDT8Q8WV74 236 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 PSMG2Q969U7 264 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 TADA1Q96BN2 335 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 ERLEC1Q96DZ1 483 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 BTN2A3PQ96KV6 586 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 ZNF641Q96N77 438 aaPredicted RBP15.35■□□□□ 0.05
DDX55-201ENST00000238146 FEM1AQ9BSK4 669 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 OSBPL10Q9BXB5 764 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 MAGEE1Q9HCI5 957 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 GALPQ9UBC7 116 aa15.35■□□□□ 0.05
DDX55-201ENST00000238146 AQP9O43315 295 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 TBC1D4O60343 1298 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 CNOT3O75175 753 aaKnown RBP15.34■□□□□ 0.05
DDX55-201ENST00000238146 INMTO95050 263 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 THP07101 528 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 STC1P52823 247 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 GP2P55259 537 aaKnown RBP15.34■□□□□ 0.05
DDX55-201ENST00000238146 IFITM3Q01628 133 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 TMEM53Q6P2H8 277 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 EFL1Q7Z2Z2 1120 aaKnown RBP15.34■□□□□ 0.05
DDX55-201ENST00000238146 ANKRD13BQ86YJ7 626 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 SNX29P2Q8IUI4 249 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 CADM3Q8N126 398 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 GPRC5AQ8NFJ5 357 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 SLC16A10Q8TF71 515 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 FUBP1Q96AE4 644 aaKnown RBP15.34■□□□□ 0.05
DDX55-201ENST00000238146 ESAMQ96AP7 390 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 CGREF1Q99674 301 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 HGH1Q9BTY7 390 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 SYTL2Q9HCH5 934 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 CATSPERZQ9NTU4 200 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 KIAA1522Q9P206 1035 aaPredicted RBP15.34■□□□□ 0.05
DDX55-201ENST00000238146 PCTPQ9UKL6 214 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 ITGB1BP2Q9UKP3 347 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 BRCA1P38398 1863 aaKnown RBP15.34■□□□□ 0.05
DDX55-201ENST00000238146 CASTOR2A6NHX0 329 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 TOR1BO14657 336 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 RPP40O75818 363 aaKnown RBP15.34■□□□□ 0.05
DDX55-201ENST00000238146 RHOBTB1O94844 696 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 PIRTP0C851 137 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 CRYBB1P53674 252 aaPredicted RBP15.34■□□□□ 0.05
DDX55-201ENST00000238146 PPP2R2BQ00005 443 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 KCNAB2Q13303 367 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 NKG7Q16617 165 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 Q6ZSR9 355 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 SCD5Q86SK9 330 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 LRRTM3Q86VH5 581 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 DCBLD1Q8N8Z6 715 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 PJA1Q8NG27 643 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 OR4L1Q8NH43 312 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 C1QTNF3Q9BXJ4 246 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 SP110Q9HB58 689 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 COMMD8Q9NX08 183 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 SMPD4Q9NXE4 827 aa15.34■□□□□ 0.05
DDX55-201ENST00000238146 DNMT3BQ9UBC3 853 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms