RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 SPRED1Q7Z699 444 aa13.51□□□□□ -0.25
VEGFA-201ENST00000230480 LRRTM4Q86VH4 590 aa13.51□□□□□ -0.25
VEGFA-201ENST00000230480 SERPINA9Q86WD7 417 aa13.51□□□□□ -0.25
VEGFA-201ENST00000230480 ZNF761Q86XN6 746 aaPredicted RBP13.51□□□□□ -0.25
VEGFA-201ENST00000230480 SPNS2Q8IVW8 549 aa13.51□□□□□ -0.25
VEGFA-201ENST00000230480 NAT8LQ8N9F0 302 aa13.51□□□□□ -0.25
VEGFA-201ENST00000230480 KDF1Q8NAX2 398 aaPredicted RBP13.51□□□□□ -0.25
VEGFA-201ENST00000230480 MAPK15Q8TD08 544 aa13.51□□□□□ -0.25
VEGFA-201ENST00000230480 SLCO2A1Q92959 643 aa13.51□□□□□ -0.25
VEGFA-201ENST00000230480 HDAC10Q969S8 669 aa13.51□□□□□ -0.25
VEGFA-201ENST00000230480 TIMM29Q9BSF4 260 aa13.51□□□□□ -0.25
VEGFA-201ENST00000230480 PLAC1Q9HBJ0 212 aa13.51□□□□□ -0.25
VEGFA-201ENST00000230480 MARCH4Q9P2E8 410 aaPredicted RBP13.51□□□□□ -0.25
VEGFA-201ENST00000230480 PCYOX1Q9UHG3 505 aa13.51□□□□□ -0.25
VEGFA-201ENST00000230480 ATXN7L1Q9ULK2 861 aaPredicted RBP13.51□□□□□ -0.25
VEGFA-201ENST00000230480 DOLKQ9UPQ8 538 aa13.51□□□□□ -0.25
VEGFA-201ENST00000230480 TCAF1Q9Y4C2 921 aa13.51□□□□□ -0.25
VEGFA-201ENST00000230480 PTPRQQ9UMZ3 2332 aa13.5□□□□□ -0.25
VEGFA-201ENST00000230480 OR2AG2A6NM03 316 aa13.5□□□□□ -0.25
VEGFA-201ENST00000230480 GPR89AB7ZAQ6 455 aa13.5□□□□□ -0.25
VEGFA-201ENST00000230480 KMOO15229 486 aa13.5□□□□□ -0.25
VEGFA-201ENST00000230480 GPR89BP0CG08 455 aa13.5□□□□□ -0.25
VEGFA-201ENST00000230480 CDK4P11802 303 aa13.5□□□□□ -0.25
VEGFA-201ENST00000230480 HOXB3P14651 431 aaPredicted RBP13.5□□□□□ -0.25
VEGFA-201ENST00000230480 MGAT1P26572 445 aa13.5□□□□□ -0.25
VEGFA-201ENST00000230480 FNTAP49354 379 aa13.5□□□□□ -0.25
VEGFA-201ENST00000230480 ZFP36L1Q07352 338 aaKnown RBP13.5□□□□□ -0.25
VEGFA-201ENST00000230480 DMPKQ09013 629 aa13.5□□□□□ -0.25
VEGFA-201ENST00000230480 ITGA9Q13797 1035 aa13.5□□□□□ -0.25
VEGFA-201ENST00000230480 RTP5Q14D33 572 aa13.5□□□□□ -0.25
VEGFA-201ENST00000230480 DNTTIP2Q5QJE6 756 aaKnown RBP13.5□□□□□ -0.25
VEGFA-201ENST00000230480 LDLRAP1Q5SW96 308 aa13.5□□□□□ -0.25
VEGFA-201ENST00000230480 CES3Q6UWW8 571 aa13.5□□□□□ -0.25
VEGFA-201ENST00000230480 UNQ6494/PRO21346Q6UXR6 183 aa13.5□□□□□ -0.25
VEGFA-201ENST00000230480 GALNT15Q8N3T1 639 aa13.5□□□□□ -0.25
VEGFA-201ENST00000230480 CLDN19Q8N6F1 224 aa13.5□□□□□ -0.25
VEGFA-201ENST00000230480 SCG3Q8WXD2 468 aaKnown RBP13.5□□□□□ -0.25
VEGFA-201ENST00000230480 CAPZA3Q96KX2 299 aa13.5□□□□□ -0.25
VEGFA-201ENST00000230480 FCRL3Q96P31 734 aaPredicted RBP13.5□□□□□ -0.25
VEGFA-201ENST00000230480 NAPGQ99747 312 aaPredicted RBP13.5□□□□□ -0.25
VEGFA-201ENST00000230480 KIFC1Q9BW19 673 aa13.5□□□□□ -0.25
VEGFA-201ENST00000230480 LRRN3Q9H3W5 708 aa13.5□□□□□ -0.25
VEGFA-201ENST00000230480 SYBUQ9NX95 663 aa13.5□□□□□ -0.25
VEGFA-201ENST00000230480 NCKIPSDQ9NZQ3 722 aa13.5□□□□□ -0.25
VEGFA-201ENST00000230480 OGFRQ9NZT2 677 aa13.5□□□□□ -0.25
VEGFA-201ENST00000230480 CLCA2Q9UQC9 943 aa13.5□□□□□ -0.25
VEGFA-201ENST00000230480 ZFYVE26Q68DK2 2539 aa13.5□□□□□ -0.25
VEGFA-201ENST00000230480 CSO75390 466 aaKnown RBP13.49□□□□□ -0.25
VEGFA-201ENST00000230480 GOT2P00505 430 aaKnown RBP13.49□□□□□ -0.25
VEGFA-201ENST00000230480 RPLP0P05388 317 aaKnown RBP13.49□□□□□ -0.25
VEGFA-201ENST00000230480 PROS1P07225 676 aa13.49□□□□□ -0.25
VEGFA-201ENST00000230480 F3P13726 295 aa13.49□□□□□ -0.25
VEGFA-201ENST00000230480 JUPP14923 745 aa13.49□□□□□ -0.25
VEGFA-201ENST00000230480 ACRV1P26436 265 aa13.49□□□□□ -0.25
VEGFA-201ENST00000230480 CSF2RBP32927 897 aa13.49□□□□□ -0.25
VEGFA-201ENST00000230480 ARCN1P48444 511 aaKnown RBP13.49□□□□□ -0.25
VEGFA-201ENST00000230480 RPIAP49247 311 aa13.49□□□□□ -0.25
VEGFA-201ENST00000230480 SESN2P58004 480 aaPredicted RBP13.49□□□□□ -0.25
VEGFA-201ENST00000230480 ETF1P62495 437 aaKnown RBP13.49□□□□□ -0.25
VEGFA-201ENST00000230480 BASP1P80723 227 aaKnown RBP13.49□□□□□ -0.25
VEGFA-201ENST00000230480 SQSTM1Q13501 440 aa13.49□□□□□ -0.25
VEGFA-201ENST00000230480 SEPT6Q14141 434 aa13.49□□□□□ -0.25
VEGFA-201ENST00000230480 NFE2L1Q14494 772 aa13.49□□□□□ -0.25
VEGFA-201ENST00000230480 GPR33Q49SQ1 333 aa13.49□□□□□ -0.25
VEGFA-201ENST00000230480 BCL7AQ4VC05 210 aa13.49□□□□□ -0.25
VEGFA-201ENST00000230480 PCID2Q5JVF3 399 aa13.49□□□□□ -0.25
VEGFA-201ENST00000230480 RNASEH2BQ5TBB1 312 aaKnown RBP13.49□□□□□ -0.25
VEGFA-201ENST00000230480 NKAIN2Q5VXU1 208 aa13.49□□□□□ -0.25
VEGFA-201ENST00000230480 C4orf22Q6V702 233 aa13.49□□□□□ -0.25
VEGFA-201ENST00000230480 WASH2PQ6VEQ5 465 aa13.49□□□□□ -0.25
VEGFA-201ENST00000230480 DET1Q7L5Y6 550 aa13.49□□□□□ -0.25
VEGFA-201ENST00000230480 GSTA5Q7RTV2 222 aa13.49□□□□□ -0.25
VEGFA-201ENST00000230480 SLITRK4Q8IW52 837 aa13.49□□□□□ -0.25
VEGFA-201ENST00000230480 Q8N9G6 341 aaPredicted RBP13.49□□□□□ -0.25
VEGFA-201ENST00000230480 MDM1Q8TC05 714 aa13.49□□□□□ -0.25
VEGFA-201ENST00000230480 NAT6Q93015 286 aa13.49□□□□□ -0.25
VEGFA-201ENST00000230480 MFSD3Q96ES6 412 aa13.49□□□□□ -0.25
VEGFA-201ENST00000230480 SGSM3Q96HU1 749 aa13.49□□□□□ -0.25
VEGFA-201ENST00000230480 SIGLEC10Q96LC7 697 aa13.49□□□□□ -0.25
VEGFA-201ENST00000230480 LINC00615Q96LM1 132 aaPredicted RBP13.49□□□□□ -0.25
VEGFA-201ENST00000230480 NRTNQ99748 197 aa13.49□□□□□ -0.25
VEGFA-201ENST00000230480 WDR83Q9BRX9 315 aaKnown RBP13.49□□□□□ -0.25
VEGFA-201ENST00000230480 WASH6PQ9NQA3 447 aa13.49□□□□□ -0.25
VEGFA-201ENST00000230480 ZDHHC3Q9NYG2 299 aa13.49□□□□□ -0.25
VEGFA-201ENST00000230480 TMEM9Q9P0T7 183 aa13.49□□□□□ -0.25
VEGFA-201ENST00000230480 DNAJC16Q9Y2G8 782 aa13.49□□□□□ -0.25
VEGFA-201ENST00000230480 SAR1BQ9Y6B6 198 aa13.49□□□□□ -0.25
VEGFA-201ENST00000230480 SNRNP200O75643 2136 aaKnown RBP13.49□□□□□ -0.25
VEGFA-201ENST00000230480 SPTBP11277 2137 aa13.48□□□□□ -0.25
VEGFA-201ENST00000230480 IGHV1OR21-1A0A087WYE8 117 aa13.48□□□□□ -0.25
VEGFA-201ENST00000230480 HEATR9A2RTY3 570 aa13.48□□□□□ -0.25
VEGFA-201ENST00000230480 OR1I1O60431 355 aa13.48□□□□□ -0.25
VEGFA-201ENST00000230480 SNX2O60749 519 aa13.48□□□□□ -0.25
VEGFA-201ENST00000230480 XRCC1P18887 633 aaPredicted RBP13.48□□□□□ -0.25
VEGFA-201ENST00000230480 RPL10P27635 214 aaKnown RBP13.48□□□□□ -0.25
VEGFA-201ENST00000230480 HADHAP40939 763 aa13.48□□□□□ -0.25
VEGFA-201ENST00000230480 NPY2RP49146 381 aa13.48□□□□□ -0.25
VEGFA-201ENST00000230480 DRG2P55039 364 aaKnown RBP13.48□□□□□ -0.25
VEGFA-201ENST00000230480 MRPS25P82663 173 aaKnown RBP13.48□□□□□ -0.25
VEGFA-201ENST00000230480 PDE1BQ01064 536 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms