RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 MARCH4Q9P2E8 410 aaPredicted RBP13.6□□□□□ -0.23
NFKB1-201ENST00000226574 RAPGEFL1Q9UHV5 662 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 MRPS7Q9Y2R9 242 aaKnown RBP13.6□□□□□ -0.23
NFKB1-201ENST00000226574 TESMINQ9Y4I5 508 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 UPK3BL1B0FP48 263 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 UPK3BL2E5RIL1 263 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 G3V2L1 256 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 SOCS2O14508 198 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 B4GAT1O43505 415 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 SERPINA1P01009 418 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 GNAO1P09471 354 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 IL12AP29459 219 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 ARSDP51689 593 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 NUDT6P53370 316 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 AIF1P55008 147 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 ZNF846Q147U1 533 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 PAFAH1B3Q15102 231 aaKnown RBP13.6□□□□□ -0.23
NFKB1-201ENST00000226574 PHKG1Q16816 387 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 C6orf183Q5T699 404 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 SMYD5Q6GMV2 418 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 TRIM69Q86WT6 500 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 PROX1Q92786 737 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 ROPN1LQ96C74 230 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 OTUB1Q96FW1 271 aaPredicted RBP13.6□□□□□ -0.23
NFKB1-201ENST00000226574 DHRS4Q9BTZ2 278 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 POLE4Q9NR33 117 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 KLHL3Q9UH77 587 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 NUMBLQ9Y6R0 609 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 MICAL3Q7RTP6 2002 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 NUP205Q92621 2012 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 FAM25AB3EWG3 89 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 FAM25CB3EWG5 89 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 FAM25GB3EWG6 89 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 IFRD1O00458 451 aaPredicted RBP13.6□□□□□ -0.23
NFKB1-201ENST00000226574 STBD1O95210 358 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 CCL14Q16627 93 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 ZNF423Q2M1K9 1284 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 HECTD3Q5T447 861 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 FBXL22Q6P050 247 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 DOK6Q6PKX4 331 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 TRAPPC5Q8IUR0 188 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 DRAXINQ8NBI3 349 aaPredicted RBP13.6□□□□□ -0.23
NFKB1-201ENST00000226574 MTERF1Q99551 399 aaKnown RBP13.6□□□□□ -0.23
NFKB1-201ENST00000226574 OLFM1Q99784 485 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 ANKDD1BA6NHY2 528 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 PQBP1O60828 265 aaKnown RBP13.59□□□□□ -0.23
NFKB1-201ENST00000226574 RHOQP17081 205 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 NIPAL4Q0D2K0 466 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 EPS8Q12929 822 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 RFX4Q33E94 735 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 ZNF57Q68EA5 555 aaPredicted RBP13.59□□□□□ -0.23
NFKB1-201ENST00000226574 KLHL35Q6PF15 583 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 CASP12Q6UXS9 341 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 ERMP1Q7Z2K6 904 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 PROSER1Q86XN7 944 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 BIRC7Q96CA5 298 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 STARD7Q9NQZ5 370 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 SUCOQ9UBS9 1254 aaKnown RBP13.59□□□□□ -0.23
NFKB1-201ENST00000226574 CD84Q9UIB8 345 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 FCF1Q9Y324 198 aaKnown RBP13.59□□□□□ -0.23
NFKB1-201ENST00000226574 BRWD1Q9NSI6 2320 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 GRID2O43424 1007 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 OR56A5P0C7T3 313 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 UROSP10746 265 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 G6PDP11413 515 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 CYP2A7P20853 494 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 RPL9P32969 192 aaKnown RBP13.59□□□□□ -0.23
NFKB1-201ENST00000226574 NDST2P52849 883 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 SPIBQ01892 262 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 NCF4Q15080 339 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 DDI2Q5TDH0 399 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 C19orf18Q8NEA5 215 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 EEF1AKMT1Q8WVE0 214 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 ISOC1Q96CN7 298 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 RMI1Q9H9A7 625 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 SMOXQ9NWM0 555 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 UBAP1Q9NZ09 502 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 DNMT3LQ9UJW3 386 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 ZCWPW2A0A1B0GU75 182 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 NDUFS2O75306 463 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 PRAMEF1O95521 474 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 HAPLN1P10915 354 aaPredicted RBP13.59□□□□□ -0.23
NFKB1-201ENST00000226574 KCNA5P22460 613 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 CTSKP43235 329 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 KCNQ1P51787 676 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 C1DQ13901 141 aaKnown RBP13.59□□□□□ -0.23
NFKB1-201ENST00000226574 ALFQ53S48 1182 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 P2RY8Q86VZ1 359 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 LRRC49Q8IUZ0 686 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 ZDHHC21Q8IVQ6 265 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 STK40Q8N2I9 435 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 MARVELD2Q8N4S9 558 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 ANKRD49Q8WVL7 239 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 TMCC2O75069 709 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 STK16O75716 305 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 CDK9P50750 372 aaKnown RBP13.59□□□□□ -0.23
NFKB1-201ENST00000226574 GALNT2Q10471 571 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 PTGR1Q14914 329 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 PIGGQ5H8A4 983 aa13.59□□□□□ -0.23
NFKB1-201ENST00000226574 SPATA19Q7Z5L4 167 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms