RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 ADAMTS4O75173 837 aa14.79□□□□□ -0.04
UBE2D4-201ENST00000222402 IGSF6O95976 241 aa14.79□□□□□ -0.04
UBE2D4-201ENST00000222402 GGT5P36269 586 aa14.79□□□□□ -0.04
UBE2D4-201ENST00000222402 NAA20P61599 178 aa14.79□□□□□ -0.04
UBE2D4-201ENST00000222402 PABPC1LQ4VXU2 614 aaKnown RBP14.79□□□□□ -0.04
UBE2D4-201ENST00000222402 FOXB2Q5VYV0 432 aa14.79□□□□□ -0.04
UBE2D4-201ENST00000222402 SLC2A7Q6PXP3 512 aa14.79□□□□□ -0.04
UBE2D4-201ENST00000222402 SYVN1Q86TM6 617 aa14.79□□□□□ -0.04
UBE2D4-201ENST00000222402 HJURPQ8NCD3 748 aaPredicted RBP14.79□□□□□ -0.04
UBE2D4-201ENST00000222402 ZFAND2BQ8WV99 257 aa14.79□□□□□ -0.04
UBE2D4-201ENST00000222402 SELENOMQ8WWX9 145 aa14.79□□□□□ -0.04
UBE2D4-201ENST00000222402 PEX13Q92968 403 aa14.79□□□□□ -0.04
UBE2D4-201ENST00000222402 MAELQ96JY0 434 aaKnown RBP14.79□□□□□ -0.04
UBE2D4-201ENST00000222402 RPL10LQ96L21 214 aaKnown RBP14.79□□□□□ -0.04
UBE2D4-201ENST00000222402 TNKS2Q9H2K2 1166 aa14.79□□□□□ -0.04
UBE2D4-201ENST00000222402 RUBCNLQ9H714 662 aa14.79□□□□□ -0.04
UBE2D4-201ENST00000222402 MROH6A6NGR9 719 aa14.79□□□□□ -0.04
UBE2D4-201ENST00000222402 KDELR3O43731 214 aa14.79□□□□□ -0.04
UBE2D4-201ENST00000222402 B4GALT3O60512 393 aa14.79□□□□□ -0.04
UBE2D4-201ENST00000222402 SH3BGRLO75368 114 aa14.79□□□□□ -0.04
UBE2D4-201ENST00000222402 PRDX3P30048 256 aaKnown RBP14.79□□□□□ -0.04
UBE2D4-201ENST00000222402 ATP4BP51164 291 aa14.79□□□□□ -0.04
UBE2D4-201ENST00000222402 MAD2L1Q13257 205 aaPredicted RBP14.79□□□□□ -0.04
UBE2D4-201ENST00000222402 CD99L2Q8TCZ2 262 aa14.79□□□□□ -0.04
UBE2D4-201ENST00000222402 GFM2Q969S9 779 aaKnown RBP14.79□□□□□ -0.04
UBE2D4-201ENST00000222402 SH3GL1Q99961 368 aa14.79□□□□□ -0.04
UBE2D4-201ENST00000222402 ASPSCR1Q9BZE9 553 aa14.79□□□□□ -0.04
UBE2D4-201ENST00000222402 ACTR3BQ9P1U1 418 aa14.79□□□□□ -0.04
UBE2D4-201ENST00000222402 KIF17Q9P2E2 1029 aa14.79□□□□□ -0.04
UBE2D4-201ENST00000222402 TBC1D30Q9Y2I9 924 aa14.79□□□□□ -0.04
UBE2D4-201ENST00000222402 MGAMO43451 1857 aa14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 SERPINA4P29622 427 aa14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 TGFBIQ15582 683 aa14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 CHID1Q9BWS9 393 aa14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 NUDT4Q9NZJ9 180 aa14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 BLOC1S6Q9UL45 172 aa14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 TMCO1Q9UM00 188 aa14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 ACOT8O14734 319 aa14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 COCHO43405 550 aa14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 LRG1P02750 347 aa14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 SPESP1Q6UW49 350 aa14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 ZNF598Q86UK7 904 aaKnown RBP14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 PIANPQ8IYJ0 282 aa14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 ARL14EPQ8N8R7 260 aaPredicted RBP14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 OR2T12Q8NG77 320 aa14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 SNRNP27Q8WVK2 155 aaKnown RBP14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 LRCH3Q96II8 777 aa14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 BEGAINQ9BUH8 593 aa14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 UGT2B28Q9BY64 529 aa14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 POPDC3Q9HBV1 291 aa14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 PCDHB1Q9Y5F3 818 aa14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 CFAP99D6REC4 459 aa14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 GPR39O43194 453 aa14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 ANXA6P08133 673 aa14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 ANXA5P08758 320 aa14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 GPX3P22352 226 aa14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 GDF5P43026 501 aa14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 RPS9P46781 194 aaKnown RBP14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 HMGCS1Q01581 520 aa14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 GPR107Q5VW38 600 aa14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 RETREG3Q86VR2 466 aa14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 OR52B6Q8NGF0 335 aa14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 TDRD1Q9BXT4 1180 aaKnown RBP14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 SMPD3Q9NY59 655 aaPredicted RBP14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 ZNF711Q9Y462 761 aa14.78□□□□□ -0.04
UBE2D4-201ENST00000222402 FFAR2O15552 330 aa14.77□□□□□ -0.04
UBE2D4-201ENST00000222402 HS6ST1O60243 411 aa14.77□□□□□ -0.04
UBE2D4-201ENST00000222402 MMP2P08253 660 aa14.77□□□□□ -0.04
UBE2D4-201ENST00000222402 SLC6A4P31645 630 aa14.77□□□□□ -0.04
UBE2D4-201ENST00000222402 S100A3P33764 101 aa14.77□□□□□ -0.04
UBE2D4-201ENST00000222402 NNMTP40261 264 aa14.77□□□□□ -0.04
UBE2D4-201ENST00000222402 CREB5Q02930 508 aa14.77□□□□□ -0.04
UBE2D4-201ENST00000222402 MERTKQ12866 999 aa14.77□□□□□ -0.04
UBE2D4-201ENST00000222402 C16orf72Q14CZ0 275 aa14.77□□□□□ -0.04
UBE2D4-201ENST00000222402 MYLK3Q32MK0 819 aa14.77□□□□□ -0.04
UBE2D4-201ENST00000222402 CERS6Q6ZMG9 384 aa14.77□□□□□ -0.04
UBE2D4-201ENST00000222402 PELI3Q8N2H9 469 aa14.77□□□□□ -0.04
UBE2D4-201ENST00000222402 TRPV3Q8NET8 790 aa14.77□□□□□ -0.04
UBE2D4-201ENST00000222402 FUBP1Q96AE4 644 aaKnown RBP14.77□□□□□ -0.04
UBE2D4-201ENST00000222402 PLD4Q96BZ4 506 aa14.77□□□□□ -0.04
UBE2D4-201ENST00000222402 ATP13A3Q9H7F0 1226 aa14.77□□□□□ -0.04
UBE2D4-201ENST00000222402 LIN28AQ9H9Z2 209 aaKnown RBP14.77□□□□□ -0.04
UBE2D4-201ENST00000222402 MYO1DO94832 1006 aa14.77□□□□□ -0.04
UBE2D4-201ENST00000222402 GALTP07902 379 aa14.77□□□□□ -0.04
UBE2D4-201ENST00000222402 NUP107P57740 925 aa14.77□□□□□ -0.04
UBE2D4-201ENST00000222402 MYBPC1Q00872 1141 aa14.77□□□□□ -0.04
UBE2D4-201ENST00000222402 SYTL3Q4VX76 610 aa14.77□□□□□ -0.04
UBE2D4-201ENST00000222402 RTN4RL1Q86UN2 441 aaPredicted RBP14.77□□□□□ -0.04
UBE2D4-201ENST00000222402 NSUN3Q9H649 340 aaKnown RBP14.77□□□□□ -0.04
UBE2D4-201ENST00000222402 MAGEL2Q9UJ55 1249 aa14.77□□□□□ -0.04
UBE2D4-201ENST00000222402 ZNF490Q9ULM2 529 aaPredicted RBP14.77□□□□□ -0.04
UBE2D4-201ENST00000222402 PLXNB2O15031 1838 aa14.77□□□□□ -0.05
UBE2D4-201ENST00000222402 FAM234BA2RU67 622 aa14.77□□□□□ -0.05
UBE2D4-201ENST00000222402 DRGXA6NNA5 263 aa14.77□□□□□ -0.05
UBE2D4-201ENST00000222402 PARNO95453 639 aaKnown RBP14.77□□□□□ -0.05
UBE2D4-201ENST00000222402 DCTN2Q13561 401 aaKnown RBP14.77□□□□□ -0.05
UBE2D4-201ENST00000222402 PTPRRQ15256 657 aa14.77□□□□□ -0.05
UBE2D4-201ENST00000222402 C6orf136Q5SQH8 315 aa14.77□□□□□ -0.05
UBE2D4-201ENST00000222402 NADSYN1Q6IA69 706 aa14.77□□□□□ -0.05
UBE2D4-201ENST00000222402 TSSK3Q96PN8 268 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms