RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 FBXO5Q9UKT4 447 aa13.5□□□□□ -0.25
GABPB1-201ENST00000220429 KRT87PA6NCN2 255 aa13.5□□□□□ -0.25
GABPB1-201ENST00000220429 GABRDO14764 452 aa13.5□□□□□ -0.25
GABPB1-201ENST00000220429 AMHP03971 560 aa13.5□□□□□ -0.25
GABPB1-201ENST00000220429 AFF1P51825 1210 aaKnown RBP13.5□□□□□ -0.25
GABPB1-201ENST00000220429 ACAP2Q15057 778 aa13.5□□□□□ -0.25
GABPB1-201ENST00000220429 GEN1Q17RS7 908 aa13.5□□□□□ -0.25
GABPB1-201ENST00000220429 TBRG1Q3YBR2 411 aa13.5□□□□□ -0.25
GABPB1-201ENST00000220429 IRAK1BP1Q5VVH5 260 aa13.5□□□□□ -0.25
GABPB1-201ENST00000220429 CORO6Q6QEF8 472 aa13.5□□□□□ -0.25
GABPB1-201ENST00000220429 CLEC20AQ6ZU45 233 aa13.5□□□□□ -0.25
GABPB1-201ENST00000220429 VN1R5Q7Z5H4 357 aa13.5□□□□□ -0.25
GABPB1-201ENST00000220429 OR7D4Q8NG98 312 aa13.5□□□□□ -0.25
GABPB1-201ENST00000220429 OR13J1Q8NGT2 312 aa13.5□□□□□ -0.25
GABPB1-201ENST00000220429 APBA2Q99767 749 aa13.5□□□□□ -0.25
GABPB1-201ENST00000220429 ALOXE3Q9BYJ1 711 aa13.5□□□□□ -0.25
GABPB1-201ENST00000220429 MCCC2Q9HCC0 563 aa13.5□□□□□ -0.25
GABPB1-201ENST00000220429 ZC3H7BQ9UGR2 993 aaKnown RBP13.5□□□□□ -0.25
GABPB1-201ENST00000220429 CDY2AQ9Y6F7 541 aa13.5□□□□□ -0.25
GABPB1-201ENST00000220429 CDY1Q9Y6F8 540 aa13.5□□□□□ -0.25
GABPB1-201ENST00000220429 PABPN1LA6NDY0 278 aaKnown RBP13.49□□□□□ -0.25
GABPB1-201ENST00000220429 ZBBXA8MT70 800 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 APOA1P02647 267 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 MAGEA3P43357 314 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 APLP1P51693 650 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 RABGGTBP53611 331 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 MFSD13AQ14CX5 517 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 ADPRMQ3LIE5 342 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 DPY19L3Q6ZPD9 716 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 USP51Q70EK9 711 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 SLAIN1Q8ND83 568 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 CDC26Q8NHZ8 85 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 MAPK15Q8TD08 544 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 CANT1Q8WVQ1 401 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 NT5C3BQ969T7 300 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 NXNL1Q96CM4 212 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 OPALINQ96PE5 141 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 NPAS2Q99743 824 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 SOX17Q9H6I2 414 aaPredicted RBP13.49□□□□□ -0.25
GABPB1-201ENST00000220429 ZNF175Q9Y473 711 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 SYNJ2BP-COX16A0A087WUM0 186 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 H3BMM5 538 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 SLC22A2O15244 555 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 FGF18O76093 207 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 CDK14O94921 469 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 GABARAPO95166 117 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 RASAL1O95294 804 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 IL7P13232 177 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 TPSB2P20231 275 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 SOX9P48436 509 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 PSMD8P48556 350 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 ZNF157P51786 506 aaPredicted RBP13.49□□□□□ -0.25
GABPB1-201ENST00000220429 MRPS6P82932 125 aaKnown RBP13.49□□□□□ -0.25
GABPB1-201ENST00000220429 PCLAFQ15004 111 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 TPSAB1Q15661 275 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 ATP6AP1Q15904 470 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 STXBP5Q5T5C0 1151 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 GRTP1Q5TC63 336 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 MROH9Q5TGP6 573 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 SYPL2Q5VXT5 272 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 TAF2Q6P1X5 1199 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 HFE2Q6ZVN8 426 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 BNIPLQ7Z465 357 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 C10orf107Q8IVU9 208 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 NETO2Q8NC67 525 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 TRPV1Q8NER1 839 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 DYNC2LI1Q8TCX1 351 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 WNT8BQ93098 351 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 SIGLEC10Q96LC7 697 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 NPY6RQ99463 290 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 KIFC1Q9BW19 673 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 BTBD2Q9BX70 525 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 CRTAC1Q9NQ79 661 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 NECTIN3Q9NQS3 549 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 IARS2Q9NSE4 1012 aaKnown RBP13.49□□□□□ -0.25
GABPB1-201ENST00000220429 FAM105AQ9NUU6 356 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 SMPD3Q9NY59 655 aaPredicted RBP13.49□□□□□ -0.25
GABPB1-201ENST00000220429 TAS2R7Q9NYW3 318 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 COX16Q9P0S2 106 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 NUDT5Q9UKK9 219 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 KCNE2Q9Y6J6 123 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 NUP205Q92621 2012 aa13.49□□□□□ -0.25
GABPB1-201ENST00000220429 FAM149AA5PLN7 773 aa13.48□□□□□ -0.25
GABPB1-201ENST00000220429 LINC01387J3KSC0 135 aa13.48□□□□□ -0.25
GABPB1-201ENST00000220429 MFSD11O43934 449 aa13.48□□□□□ -0.25
GABPB1-201ENST00000220429 NOS2P35228 1153 aa13.48□□□□□ -0.25
GABPB1-201ENST00000220429 ARL4AP40617 200 aa13.48□□□□□ -0.25
GABPB1-201ENST00000220429 CLK1P49759 484 aaKnown RBP13.48□□□□□ -0.25
GABPB1-201ENST00000220429 PSME3P61289 254 aa13.48□□□□□ -0.25
GABPB1-201ENST00000220429 OLR1P78380 273 aa13.48□□□□□ -0.25
GABPB1-201ENST00000220429 NXNL2Q5VZ03 156 aa13.48□□□□□ -0.25
GABPB1-201ENST00000220429 HEATR6Q6AI08 1181 aaKnown RBP13.48□□□□□ -0.25
GABPB1-201ENST00000220429 ZNF767PQ75MW2 155 aa13.48□□□□□ -0.25
GABPB1-201ENST00000220429 CDH24Q86UP0 819 aa13.48□□□□□ -0.25
GABPB1-201ENST00000220429 PJA1Q8NG27 643 aa13.48□□□□□ -0.25
GABPB1-201ENST00000220429 ADAM32Q8TC27 787 aa13.48□□□□□ -0.25
GABPB1-201ENST00000220429 FAM110BQ8TC76 370 aa13.48□□□□□ -0.25
GABPB1-201ENST00000220429 KCTD13Q8WZ19 329 aa13.48□□□□□ -0.25
GABPB1-201ENST00000220429 MUL1Q969V5 352 aa13.48□□□□□ -0.25
GABPB1-201ENST00000220429 SENP8Q96LD8 212 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms