RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 PIGXQ8TBF5 258 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 TMEM106CQ9BVX2 250 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 YIPF2Q9BWQ6 316 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 CADM1Q9BY67 442 aaKnown RBP4.38□□□□□ -1.71
CHD9-201ENST00000219084 PRDM12Q9H4Q4 367 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 DMAC2Q9NW81 257 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.38□□□□□ -1.71
CHD9-201ENST00000219084 GALNT8Q9NY28 637 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 ACTR3BQ9P1U1 418 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 PTGFRNQ9P2B2 879 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 NFKBIL1Q9UBC1 381 aaPredicted RBP4.38□□□□□ -1.71
CHD9-201ENST00000219084 FAM50BQ9Y247 325 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 KIAA1551Q9HCM1 1747 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 EPHB6O15197 1021 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 CHP2O43745 196 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 ENO2P09104 434 aaPredicted RBP4.38□□□□□ -1.71
CHD9-201ENST00000219084 DNAJA1P31689 397 aaKnown RBP4.38□□□□□ -1.71
CHD9-201ENST00000219084 SPAM1P38567 509 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 MAGEA8P43361 318 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 ORC1Q13415 861 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 MOGQ16653 247 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 KCTD21Q4G0X4 260 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 FNBP1LQ5T0N5 605 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 ATXN7L2Q5T6C5 722 aaPredicted RBP4.38□□□□□ -1.71
CHD9-201ENST00000219084 LRRC70Q7Z2Q7 622 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 TFAP2DQ7Z6R9 452 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 ADGRD2Q7Z7M1 963 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 SPPL2BQ8TCT7 592 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 TAMM41Q96BW9 452 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 CDT1Q9H211 546 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 HSD3B7Q9H2F3 369 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 CRISPLD1Q9H336 500 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 AGO3Q9H9G7 860 aaKnown RBP4.38□□□□□ -1.71
CHD9-201ENST00000219084 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.38□□□□□ -1.71
CHD9-201ENST00000219084 WDR70Q9NW82 654 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 ZNF222Q9UK12 451 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 COQ6Q9Y2Z9 468 aa4.38□□□□□ -1.71
CHD9-201ENST00000219084 C2CD4BA6NLJ0 364 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 WNT10BO00744 389 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 GRM6O15303 877 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 ZNF37AP17032 561 aaPredicted RBP4.37□□□□□ -1.71
CHD9-201ENST00000219084 ECT2LQ008S8 904 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 ITGA7Q13683 1181 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 CAPSQ13938 189 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 KCNJ11Q14654 390 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 LY6KQ17RY6 165 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 C15orf59Q2T9L4 293 aaPredicted RBP4.37□□□□□ -1.71
CHD9-201ENST00000219084 USP41Q3LFD5 358 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 SLC39A12Q504Y0 691 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 BNIPLQ7Z465 357 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 DQX1Q8TE96 717 aaKnown RBP4.37□□□□□ -1.71
CHD9-201ENST00000219084 HPS1Q92902 700 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 SPATA17Q96L03 361 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 COPS8Q99627 209 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 MTFR1LQ9H019 292 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 CCDC177Q9NQR7 707 aaPredicted RBP4.37□□□□□ -1.71
CHD9-201ENST00000219084 POLR3HQ9Y535 204 aaPredicted RBP4.37□□□□□ -1.71
CHD9-201ENST00000219084 COLEC10Q9Y6Z7 277 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 BTAF1O14981 1849 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 OR14I1A6ND48 311 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 SLC25A12O75746 678 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 BCAS2O75934 225 aaPredicted RBP4.37□□□□□ -1.71
CHD9-201ENST00000219084 CCNB2O95067 398 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 PGK1P00558 417 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 C2P06681 752 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 LINC00032P0C843 101 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 TPH1P17752 444 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 OMPP47874 163 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 SP140Q13342 867 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 KCNC3Q14003 757 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 IL18Q14116 193 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 TAF13Q15543 124 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 AP5B1Q2VPB7 878 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 GLYATQ6IB77 296 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 EIF5AL1Q6IS14 154 aaKnown RBP4.37□□□□□ -1.71
CHD9-201ENST00000219084 HEATR4Q86WZ0 1026 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 HID1Q8IV36 788 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 CXorf40AQ8TE69 158 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 GEMIN6Q8WXD5 167 aaKnown RBP4.37□□□□□ -1.71
CHD9-201ENST00000219084 AKT1S1Q96B36 256 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 YME1L1Q96TA2 773 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 SEMA3CQ99985 751 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 ACBD6Q9BR61 282 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 OSBPL7Q9BZF2 842 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 FAM240BA0A1B0GVZ2 78 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 CASTOR2A6NHX0 329 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 STX16-NPEPL1H3BU86 382 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 STX16O14662 325 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 PAGE1O75459 146 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 SMIM10L2AP0DMW4 78 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 SMIM10L2BP0DMW5 78 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 GLDCP23378 1020 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 ADRA1BP35368 520 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 NSG1P42857 185 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 TAS2R43P59537 309 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 MED22Q15528 200 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 ZNF829Q3KNS6 432 aaPredicted RBP4.37□□□□□ -1.71
CHD9-201ENST00000219084 DCST1Q5T197 706 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 FBXL19Q6PCT2 694 aa4.37□□□□□ -1.71
CHD9-201ENST00000219084 RPTNQ6XPR3 784 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms