RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 RAI2Q9Y5P3 530 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 XYLBO75191 536 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 RHOCP08134 193 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 PRKAR2AP13861 404 aaKnown RBP14.92□□□□□ -0.02
EFNB1-201ENST00000204961 TCF3P15923 654 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 MAGP20916 626 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 MAP4P27816 1152 aaKnown RBP14.92□□□□□ -0.02
EFNB1-201ENST00000204961 CA5AP35218 305 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 DGKEP52429 567 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 STC1P52823 247 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 LCP2Q13094 533 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 SERINC3Q13530 473 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 KIAA1841Q6NSI8 718 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 ENPP6Q6UWR7 440 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 ERMP1Q7Z2K6 904 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 ITIH5Q86UX2 942 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 RASAL3Q86YV0 1011 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 FAR2Q96K12 515 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 CCDC138Q96M89 665 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 AARSD1Q9BTE6 412 aaKnown RBP14.92□□□□□ -0.02
EFNB1-201ENST00000204961 UBA2Q9UBT2 640 aaPredicted RBP14.92□□□□□ -0.02
EFNB1-201ENST00000204961 PDCD11Q14690 1871 aaKnown RBP14.92□□□□□ -0.02
EFNB1-201ENST00000204961 ALBP02768 609 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 IMPDH2P12268 514 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 GJA1P17302 382 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 FSHRP23945 695 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 MZF1P28698 734 aaPredicted RBP14.92□□□□□ -0.02
EFNB1-201ENST00000204961 OR1D2P34982 312 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 ERVPABLB-1P60509 514 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 CBX3Q13185 183 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 MANEALQ5VSG8 457 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 DCP1BQ8IZD4 617 aaKnown RBP14.92□□□□□ -0.02
EFNB1-201ENST00000204961 ZC3H15Q8WU90 426 aaKnown RBP14.92□□□□□ -0.02
EFNB1-201ENST00000204961 IRGQQ8WZA9 623 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 FUBP1Q96AE4 644 aaKnown RBP14.92□□□□□ -0.02
EFNB1-201ENST00000204961 BTN2A3PQ96KV6 586 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 SUSD3Q96L08 255 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 TSSK3Q96PN8 268 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 FAM124BQ9H5Z6 455 aaPredicted RBP14.92□□□□□ -0.02
EFNB1-201ENST00000204961 FANCEQ9HB96 536 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 ANAPC2Q9UJX6 822 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 VPS28Q9UK41 221 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 ABT1Q9ULW3 272 aaKnown RBP14.92□□□□□ -0.02
EFNB1-201ENST00000204961 TBC1D30Q9Y2I9 924 aa14.92□□□□□ -0.02
EFNB1-201ENST00000204961 PLXNB2O15031 1838 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 GMNNO75496 209 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 LDLRP01130 860 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 DNAJB13P59910 316 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 PLD1Q13393 1074 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 HERC3Q15034 1050 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 MAPRE1Q15691 268 aaKnown RBP14.91□□□□□ -0.02
EFNB1-201ENST00000204961 NHSL2Q5HYW2 709 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 C16orf87Q6PH81 154 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 SERINC5Q86VE9 423 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 ZNF597Q96LX8 424 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 NSMCE2Q96MF7 247 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 ATOH8Q96SQ7 321 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 IQCA1LA6NCM1 817 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 MYCLP1P12525 358 aaPredicted RBP14.91□□□□□ -0.02
EFNB1-201ENST00000204961 SIM2Q14190 667 aaPredicted RBP14.91□□□□□ -0.02
EFNB1-201ENST00000204961 PGS1Q32NB8 556 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 GPRIN3Q6ZVF9 776 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 PIWIL3Q7Z3Z3 882 aaKnown RBP14.91□□□□□ -0.02
EFNB1-201ENST00000204961 CIPCQ9C0C6 399 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 CD84Q9UIB8 345 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 AGO1Q9UL18 857 aaKnown RBP14.91□□□□□ -0.02
EFNB1-201ENST00000204961 TCRBV3S1A0A5B6 114 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 C2orf81A6NN90 581 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 HS6ST1O60243 411 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 VPS26AO75436 327 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 IGLV3-25P01717 112 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 FDXRP22570 491 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 AQP1P29972 269 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 CCL23P55773 120 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 SH3BGRP55822 239 aaPredicted RBP14.91□□□□□ -0.02
EFNB1-201ENST00000204961 SPIDRQ14159 915 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 ABRAXAS2Q15018 415 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 MEP1AQ16819 746 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 FAM174BQ3ZCQ3 159 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 AARS2Q5JTZ9 985 aaKnown RBP14.91□□□□□ -0.02
EFNB1-201ENST00000204961 PERM1Q5SV97 790 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 KIAA0408Q6ZU52 694 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 LYSMD3Q7Z3D4 306 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 ADGRG5Q8IZF4 528 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 BRSK1Q8TDC3 778 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 DDI1Q8WTU0 396 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 SCLYQ96I15 445 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 BEGAINQ9BUH8 593 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 ZNF696Q9H7X3 374 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 TLR8Q9NR97 1041 aaKnown RBP14.91□□□□□ -0.02
EFNB1-201ENST00000204961 SLC30A1Q9Y6M5 507 aa14.91□□□□□ -0.02
EFNB1-201ENST00000204961 SPEGQ15772 3267 aa14.9□□□□□ -0.02
EFNB1-201ENST00000204961 CEP290O15078 2479 aa14.9□□□□□ -0.02
EFNB1-201ENST00000204961 DOCK6Q96HP0 2047 aa14.9□□□□□ -0.02
EFNB1-201ENST00000204961 ASPDHA6ND91 283 aa14.9□□□□□ -0.02
EFNB1-201ENST00000204961 SEC22BO75396 215 aa14.9□□□□□ -0.02
EFNB1-201ENST00000204961 ZNF189O75820 626 aaPredicted RBP14.9□□□□□ -0.02
EFNB1-201ENST00000204961 ZNF682O95780 498 aa14.9□□□□□ -0.02
EFNB1-201ENST00000204961 IL2P60568 153 aa14.9□□□□□ -0.02
EFNB1-201ENST00000204961 C6orf136Q5SQH8 315 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 770.3 ms