RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 AQP4P55087 323 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 TRAP1Q12931 704 aaKnown RBP8.16□□□□□ -1.1
VAMP3-201ENST00000054666 RALGDSQ12967 914 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 MED21Q13503 144 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 PCBP2Q15366 365 aaKnown RBP eCLIP8.16□□□□□ -1.1
VAMP3-201ENST00000054666 ATP6AP1LQ52LC2 224 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 XKR7Q5GH72 579 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 COQ5Q5HYK3 327 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 OGFRL1Q5TC84 451 aaPredicted RBP8.16□□□□□ -1.1
VAMP3-201ENST00000054666 ZDHHC20Q5W0Z9 365 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 CAPRIN2Q6IMN6 1127 aaKnown RBP8.16□□□□□ -1.1
VAMP3-201ENST00000054666 RNF111Q6ZNA4 994 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 TPRG1Q6ZUI0 275 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 CBARPQ8N350 705 aaPredicted RBP8.16□□□□□ -1.1
VAMP3-201ENST00000054666 ZBTB2Q8N680 514 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 KLHL23Q8NBE8 558 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 PDPRQ8NCN5 879 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 FAM156AQ8NDB6 213 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 UCMAQ8WVF2 138 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 PBXIP1Q96AQ6 731 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 ISG20Q96AZ6 181 aaKnown RBP8.16□□□□□ -1.1
VAMP3-201ENST00000054666 TRIM43Q96BQ3 446 aaPredicted RBP8.16□□□□□ -1.1
VAMP3-201ENST00000054666 BTBD9Q96Q07 612 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 LYSMD1Q96S90 227 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 EGFL8Q99944 293 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 HOPXQ9BPY8 73 aaPredicted RBP8.16□□□□□ -1.1
VAMP3-201ENST00000054666 EFHD1Q9BUP0 239 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 APOL5Q9BWW9 433 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 ZDHHC6Q9H6R6 413 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 IL26Q9NPH9 171 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 SPATS2LQ9NUQ6 558 aaKnown RBP8.16□□□□□ -1.1
VAMP3-201ENST00000054666 WWOXQ9NZC7 414 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 DLGAP2Q9P1A6 1054 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 CLEC4EQ9ULY5 219 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 HS3ST2Q9Y278 367 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 ANGPTL3Q9Y5C1 460 aa8.16□□□□□ -1.1
VAMP3-201ENST00000054666 ANKRD12Q6UB98 2062 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 TRBV5-4A0A0C4DH59 114 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 A0A1W2PQ67 120 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 PABPN1LA6NDY0 278 aaKnown RBP8.15□□□□□ -1.1
VAMP3-201ENST00000054666 NPIPB15A6NHN6 443 aaPredicted RBP8.15□□□□□ -1.1
VAMP3-201ENST00000054666 NEDD8-MDP1E9PL57 170 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 TXNDC9O14530 226 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 GAPDHSO14556 408 aaPredicted RBP8.15□□□□□ -1.1
VAMP3-201ENST00000054666 ACOT8O14734 319 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 OR4F21O95013 312 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 SLC25A14O95258 325 aaPredicted RBP8.15□□□□□ -1.1
VAMP3-201ENST00000054666 OTCP00480 354 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 UQCRBP14927 111 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 PRDX3P30048 256 aaKnown RBP8.15□□□□□ -1.1
VAMP3-201ENST00000054666 HLA-FP30511 346 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 HMOX2P30519 316 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 NSG1P42857 185 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 RECQLP46063 649 aaPredicted RBP8.15□□□□□ -1.1
VAMP3-201ENST00000054666 ERVK-8P63133 956 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 ECT2LQ008S8 904 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 MS4A2Q01362 244 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 FOXM1Q08050 763 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 GRIK2Q13002 908 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 CHRNA6Q15825 494 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 CRY1Q16526 586 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 MYLK3Q32MK0 819 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 SFT2D3Q587I9 215 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 DGKKQ5KSL6 1271 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 PLPP4Q5VZY2 271 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 FAM219BQ5XKK7 198 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 LRRC66Q68CR7 880 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 LILRA6Q6PI73 481 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 SBSNQ6UWP8 590 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 MACC1Q6ZN28 852 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 FUNDC1Q8IVP5 155 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 NXPE1Q8N323 547 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 CHCHD4Q8N4Q1 142 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 CDYL2Q8N8U2 506 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 FNDC5Q8NAU1 212 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 TSPEARQ8WU66 669 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 SLC22A17Q8WUG5 538 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 MIEF2Q96C03 454 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 SPDL1Q96EA4 605 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 BOCQ9BWV1 1114 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 SLC46A2Q9BY10 475 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 CEP44Q9C0F1 390 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 SMG9Q9H0W8 520 aaKnown RBP8.15□□□□□ -1.1
VAMP3-201ENST00000054666 EBF3Q9H4W6 596 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 NOL11Q9H8H0 719 aaKnown RBP8.15□□□□□ -1.1
VAMP3-201ENST00000054666 COPS7BQ9H9Q2 264 aaPredicted RBP8.15□□□□□ -1.1
VAMP3-201ENST00000054666 IL23AQ9NPF7 189 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 LATS2Q9NRM7 1088 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 AIG1Q9NVV5 245 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 TMEM181Q9P2C4 612 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 INTS6Q9UL03 887 aaKnown RBP8.15□□□□□ -1.1
VAMP3-201ENST00000054666 OARD1Q9Y530 152 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 A0A1B0GTL3 188 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 C8BP07358 591 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 UBTFL6P0CB48 400 aaPredicted RBP8.15□□□□□ -1.1
VAMP3-201ENST00000054666 PRR35P0CG20 571 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 VCLP18206 1134 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 NFKBIAP25963 317 aa8.15□□□□□ -1.1
VAMP3-201ENST00000054666 CTSOP43234 321 aaPredicted RBP8.15□□□□□ -1.1
VAMP3-201ENST00000054666 GJA8P48165 433 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms