RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 MXRA7P84157 204 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 B4GALNT1Q00973 533 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 SEMG2Q02383 582 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 RALGDSQ12967 914 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 PPP1R3AQ16821 1122 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 RARS2Q5T160 578 aaKnown RBP14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 TMEM198Q66K66 360 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 METTL2BQ6P1Q9 378 aaKnown RBP14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 RFLNAQ6ZTI6 216 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 LARP4Q71RC2 724 aaKnown RBP eCLIP14.12□□□□□ -0.151e-8■■□□□ 11.5
RTFDC1-201ENST00000023939 EFL1Q7Z2Z2 1120 aaKnown RBP14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 SCUBE1Q8IWY4 988 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 CHCHD4Q8N4Q1 142 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 ENDOVQ8N8Q3 282 aaKnown RBP14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 PDPRQ8NCN5 879 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 GDPD5Q8WTR4 605 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 C19orf60Q96EN9 201 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 PPP1R36Q96LQ0 422 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 NSUN5Q96P11 429 aaKnown RBP14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 FAM83DQ9H4H8 585 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 EBF3Q9H4W6 596 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 CD274Q9NZQ7 290 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 DEC1Q9P2X7 70 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 TMPRSS11EQ9UL52 423 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 OARD1Q9Y530 152 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 DNAJC15Q9Y5T4 150 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 C16orf96A6NNT2 1141 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 PRRT4C9JH25 899 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 PSMD11O00231 422 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 E2F3O00716 465 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 RAD51BO15315 384 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 PEX11AO75192 247 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 TRIM16O95361 564 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 ESRRBO95718 433 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 LMNAP02545 664 aaKnown RBP14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 PRNPP04156 253 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 ENO3P13929 434 aaPredicted RBP14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 GM2AP17900 193 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 TSPAN8P19075 237 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 SQLEQ14534 574 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 GBX1Q14549 363 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 ACSBG2Q5FVE4 666 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 CDKL4Q5MAI5 379 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 PPP2R2DQ66LE6 453 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 CLEC6AQ6EIG7 209 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 HSD11B1LQ7Z5J1 315 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 NET1Q7Z628 596 aaPredicted RBP14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 ULK2Q8IYT8 1036 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 TRAM1L1Q8N609 369 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 TMIEQ8NEW7 156 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 OR56A4Q8NGH8 313 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 TRPC4APQ8TEL6 797 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 NXPE3Q969Y0 559 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 MRPL38Q96DV4 380 aaKnown RBP14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 CATSPER2Q96P56 530 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 FAM126AQ9BYI3 521 aaPredicted RBP14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 RNPEPL1Q9HAU8 725 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 RDH14Q9HBH5 336 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 HPS4Q9NQG7 708 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 CDH7Q9ULB5 785 aa14.12□□□□□ -0.15
RTFDC1-201ENST00000023939 C2orf16Q68DN1 1984 aa14.11□□□□□ -0.15
RTFDC1-201ENST00000023939 A0A088AWK7 358 aa14.11□□□□□ -0.15
RTFDC1-201ENST00000023939 LOC100653049A0A140TA62 436 aa14.11□□□□□ -0.15
RTFDC1-201ENST00000023939 EDDM13A0A1B0GTR0 161 aa14.11□□□□□ -0.15
RTFDC1-201ENST00000023939 OTOL1A6NHN0 477 aaPredicted RBP14.11□□□□□ -0.15
RTFDC1-201ENST00000023939 EPOPA6NHQ4 379 aa14.11□□□□□ -0.15
RTFDC1-201ENST00000023939 PPP6CO00743 305 aa14.11□□□□□ -0.15
RTFDC1-201ENST00000023939 UBDO15205 165 aa14.11□□□□□ -0.15
RTFDC1-201ENST00000023939 VPS4BO75351 444 aa14.11□□□□□ -0.15
RTFDC1-201ENST00000023939 KRT34O76011 436 aa14.11□□□□□ -0.15
RTFDC1-201ENST00000023939 AP2A2O94973 939 aa14.11□□□□□ -0.15
RTFDC1-201ENST00000023939 OR56A5P0C7T3 313 aa14.11□□□□□ -0.15
RTFDC1-201ENST00000023939 ITGAXP20702 1163 aa14.11□□□□□ -0.15
RTFDC1-201ENST00000023939 MMP12P39900 470 aa14.11□□□□□ -0.15
RTFDC1-201ENST00000023939 SLC6A11P48066 632 aa14.11□□□□□ -0.15
RTFDC1-201ENST00000023939 PKNOX1P55347 436 aa14.11□□□□□ -0.15
RTFDC1-201ENST00000023939 FCHO2Q0JRZ9 810 aa14.11□□□□□ -0.15
RTFDC1-201ENST00000023939 CYLC2Q14093 348 aaPredicted RBP14.11□□□□□ -0.15
RTFDC1-201ENST00000023939 HNRNPA1L2Q32P51 320 aaKnown RBP14.11□□□□□ -0.15
RTFDC1-201ENST00000023939 HENMT1Q5T8I9 393 aaKnown RBP14.11□□□□□ -0.15
RTFDC1-201ENST00000023939 PGM2L1Q6PCE3 622 aa14.11□□□□□ -0.15
RTFDC1-201ENST00000023939 TECPR1Q7Z6L1 1165 aa14.11□□□□□ -0.15
RTFDC1-201ENST00000023939 NRSN1Q8IZ57 195 aa14.11□□□□□ -0.15
RTFDC1-201ENST00000023939 UBTD2Q8WUN7 234 aa14.11□□□□□ -0.15
RTFDC1-201ENST00000023939 TWIST2Q8WVJ9 160 aa14.11□□□□□ -0.15
RTFDC1-201ENST00000023939 TIFAQ96CG3 184 aa14.11□□□□□ -0.15
RTFDC1-201ENST00000023939 ZNF382Q96SR6 550 aa14.11□□□□□ -0.15
RTFDC1-201ENST00000023939 CCT7Q99832 543 aa14.11□□□□□ -0.15
RTFDC1-201ENST00000023939 THTPAQ9BU02 230 aa14.11□□□□□ -0.15
RTFDC1-201ENST00000023939 PTBP2Q9UKA9 531 aaKnown RBP14.11□□□□□ -0.15
RTFDC1-201ENST00000023939 FIS1Q9Y3D6 152 aa14.11□□□□□ -0.15
RTFDC1-201ENST00000023939 BPTFQ12830 3046 aa14.11□□□□□ -0.15
RTFDC1-201ENST00000023939 PLXNB3Q9ULL4 1909 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 FFAR2O15552 330 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 CCNT2O60583 730 aaKnown RBP14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 S100BP04271 92 aaPredicted RBP14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 XPAP23025 273 aaPredicted RBP14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 AGTR2P50052 363 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 SLC25A3Q00325 362 aa14.1□□□□□ -0.15
RTFDC1-201ENST00000023939 PTK2BQ14289 1009 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms