RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 BCAP31P51572 246 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 EEFSECP57772 596 aaKnown RBP13.88□□□□□ -0.19
USH1C-201ENST00000005226 FOXM1Q08050 763 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 DAG1Q14118 895 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 DLEU7Q6UYE1 221 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 DNAJC14Q6Y2X3 702 aaPredicted RBP13.88□□□□□ -0.19
USH1C-201ENST00000005226 SPATA19Q7Z5L4 167 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 TTC9BQ8N6N2 239 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 ITFG1Q8TB96 612 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 EEF1AKMT1Q8WVE0 214 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 TBCDQ9BTW9 1192 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 BPIFA1Q9NP55 256 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 GMIPQ9P107 970 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 PCTPQ9UKL6 214 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 ST14Q9Y5Y6 855 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 TNPO2O14787 897 aaKnown RBP13.88□□□□□ -0.19
USH1C-201ENST00000005226 SERPINB7O75635 380 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 SEC14L2O76054 403 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 CPNE6O95741 557 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 CHRNA1P02708 482 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 ALPLP05186 524 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 RPS17P08708 135 aaKnown RBP13.88□□□□□ -0.19
USH1C-201ENST00000005226 HTR1AP08908 422 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 THRBP10828 461 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 PORP16435 677 aaPredicted RBP13.88□□□□□ -0.19
USH1C-201ENST00000005226 RHOQP17081 205 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 TPD52P55327 224 aaPredicted RBP13.88□□□□□ -0.19
USH1C-201ENST00000005226 ERVPABLB-1P60509 514 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 PHEXP78562 749 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 NRG1Q02297 640 aaPredicted RBP13.88□□□□□ -0.19
USH1C-201ENST00000005226 CTU2Q2VPK5 515 aaKnown RBP13.88□□□□□ -0.19
USH1C-201ENST00000005226 BROXQ5VW32 411 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 IGFN1Q86VF2 1251 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 HID1Q8IV36 788 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 PIANPQ8IYJ0 282 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 SPARTQ8N0X7 666 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 GOLM1Q8NBJ4 401 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 RSPH1Q8WYR4 309 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 MS4A4AQ96JQ5 239 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 RPRD1AQ96P16 312 aaPredicted RBP13.88□□□□□ -0.19
USH1C-201ENST00000005226 NEURL2Q9BR09 285 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 RNF181Q9P0P0 153 aa13.88□□□□□ -0.19
USH1C-201ENST00000005226 A0A0D9SEW6 157 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 CFAP99D6REC4 459 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 DFNA5O60443 496 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 ESRRBO95718 433 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 CNPP09543 421 aaKnown RBP13.87□□□□□ -0.19
USH1C-201ENST00000005226 CRHBPP24387 322 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 HTR1EP28566 365 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 OPRL1P41146 370 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 SUOXP51687 545 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 MRPS6P82932 125 aaKnown RBP13.87□□□□□ -0.19
USH1C-201ENST00000005226 RAD51Q06609 339 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 GRSF1Q12849 480 aaKnown RBP eCLIP13.87□□□□□ -0.19
USH1C-201ENST00000005226 AASDHQ4L235 1098 aaPredicted RBP13.87□□□□□ -0.19
USH1C-201ENST00000005226 PERM1Q5SV97 790 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 GALNT7Q86SF2 657 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 SERPINB11Q96P15 392 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 LRRC3Q9BY71 257 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 AMBRA1Q9C0C7 1298 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 TAS2R13Q9NYV9 303 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 CD274Q9NZQ7 290 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 BLOC1S6Q9UL45 172 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 TRIM64BA6NI03 449 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 NDUFS3O75489 264 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 INMTO95050 263 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 UMPSP11172 480 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 CDH1P12830 882 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 ALDH4A1P30038 563 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 OR1E1P30953 314 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 CD52P31358 61 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 RGRP47804 291 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 ALDH3A2P51648 485 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 LSM3P62310 102 aaKnown RBP13.87□□□□□ -0.19
USH1C-201ENST00000005226 TSPY1Q01534 308 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 XKR7Q5GH72 579 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 GTF2IRD2BQ6EKJ0 949 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 LETMD1Q6P1Q0 360 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 RBM23Q86U06 439 aaKnown RBP13.87□□□□□ -0.19
USH1C-201ENST00000005226 GTF2IRD2Q86UP8 949 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 COLGALT2Q8IYK4 626 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 TEX26Q8N6G2 289 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 FRS2Q8WU20 508 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 RMDN1Q96DB5 314 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 SLC39A13Q96H72 371 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 FUNDC2Q9BWH2 189 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 CCDC90BQ9GZT6 254 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 CCDC68Q9H2F9 335 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 ACTL8Q9H568 366 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 PCDH12Q9NPG4 1184 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 ZMYM5Q9UJ78 669 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 PSME2Q9UL46 239 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 INVSQ9Y283 1065 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 PCDHB3Q9Y5E6 796 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 U3KQV3 271 aa13.87□□□□□ -0.19
USH1C-201ENST00000005226 FAM234BA2RU67 622 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 WASH4PA8MWX3 477 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 RAMP2O60895 175 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 SULT1C4O75897 302 aa13.86□□□□□ -0.19
USH1C-201ENST00000005226 ZNF865P0CJ78 1059 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms