RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 ArhgdibQ61599 200 aaKnown RBP13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Olfr389Q7TRX7 312 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Grik4Q8BMF5 956 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Cpsf7Q8BTV2 471 aaKnown RBP13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 DdoQ922Z0 341 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Atp6ap2Q9CYN9 350 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Jph1Q9ET80 660 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Gm4450E9Q007 373 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Ctbp1O88712 441 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Cdh5P55284 784 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Hsd3b4Q61767 373 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Tmc6Q7TN60 810 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Mterf2Q8BKY8 385 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Gatad2bQ8VHR5 594 aaKnown RBP13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Gjd3Q91YD1 278 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 D10Wsu102eQ9CX66 185 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Fam96bQ9D187 163 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Olfr625-ps1A0A140T8L4 321 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Mpp1P70290 466 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Tmem65Q4VAE3 234 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Kcnt1Q6ZPR4 1224 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Zfp189Q8BKP2 608 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Zfp101Q8BP18 612 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Capn8Q91VA3 703 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 ProdhQ9WU79 599 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Snrpd1P62315 119 aaKnown RBP13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Tas2r102Q7M717 329 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 IfneQ80ZF2 192 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Rgs8Q8BXT1 180 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Gm42417Q8K1D0 126 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Arl6O88848 186 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Magea1O89006 320 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Ppp3caP63328 521 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Tead3P70210 439 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Cdc14bQ6PFY9 485 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Vmn1r64Q8R2B8 320 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Olfr809Q8VEX8 328 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 MtapQ9CQ65 283 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Otub2Q9CQX0 234 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Dnase1l1Q9D7J6 314 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 VapbQ9QY76 243 aaKnown RBP13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Magea2Q9R2A2 320 aa13.85□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Ap2m1P84091 435 aaKnown RBP13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Ggt1Q60928 568 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Galnt10Q6P9S7 603 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Tmed3Q78IS1 221 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Dsg4Q7TMD7 1041 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Adgrg1Q8K209 687 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Rbm48Q8K2X2 371 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Sh3d19Q91X43 789 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Prl2a1Q9JHK0 228 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Ggta1l1A2AUQ7 319 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Gm7970L7N271 213 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Gm7980L7N471 213 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 BpgmP15327 259 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Aldh2P47738 519 aaKnown RBP13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 TankP70347 448 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Sema4aQ62178 760 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Sez6lQ6P1D5 963 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Neto2Q8BNJ6 525 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Acsl6Q91WC3 697 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Mfsd10Q9D2V8 456 aaKnown RBP13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Slc28a3Q9ERH8 703 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Chrna6Q9R0W9 494 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Pdia2D3Z6P0 527 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Olfr520E9Q518 316 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Foxn2E9Q7L6 429 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Gm29394H3BIW7 199 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Oprl1P35377 367 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Bpifa6Q0VGU8 367 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Btnl9Q8BJE2 536 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Olfr532Q8VGT4 309 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Dnaja2Q9QYJ0 412 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Lama4P97927 1816 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Vmn2r17E9PYF5 849 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Ccnb2P30276 398 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Atp6v0d1P51863 351 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Htr4P97288 388 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Naa11Q3UX61 218 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Scube3Q66PY1 993 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Ero1bQ8R2E9 467 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Sec16bQ91XT4 1051 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Prdm9Q96EQ9 843 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Q9CPS8 106 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Oser1Q9D722 291 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 ItpkbB2RXC2 942 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Ddx43D3Z6P9 646 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Slc22a8O88909 537 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 CebpgP53568 150 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Slc6a4Q60857 630 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Fgfr3Q61851 801 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Sgpp2Q810K3 354 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Hdac7Q8C2B3 938 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Zswim3Q8CFL8 695 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Nae1Q8VBW6 534 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Pcdhb19Q91Y01 801 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Tcf7l2Q924A0 459 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 LiasQ99M04 373 aa13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Mrpl21Q9D1N9 209 aaKnown RBP13.84□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Vmn2r86G5E8Y4 848 aa13.84□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 49.4 ms