RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 CPNE6O95741 557 aa14.82□□□□□ -0.04
PHGDH-231ENST00000641939 IFNB1P01574 187 aa14.82□□□□□ -0.04
PHGDH-231ENST00000641939 F3P13726 295 aa14.82□□□□□ -0.04
PHGDH-231ENST00000641939 ZNF140P52738 457 aaPredicted RBP14.82□□□□□ -0.04
PHGDH-231ENST00000641939 ERVPABLB-1P60509 514 aa14.82□□□□□ -0.04
PHGDH-231ENST00000641939 EIF3IQ13347 325 aaKnown RBP14.82□□□□□ -0.04
PHGDH-231ENST00000641939 KIR2DS5Q14953 304 aa14.82□□□□□ -0.04
PHGDH-231ENST00000641939 CLPPQ16740 277 aaPredicted RBP14.82□□□□□ -0.04
PHGDH-231ENST00000641939 MAP9Q49MG5 647 aa14.82□□□□□ -0.04
PHGDH-231ENST00000641939 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.82□□□□□ -0.04
PHGDH-231ENST00000641939 GPRC6AQ5T6X5 926 aa14.82□□□□□ -0.04
PHGDH-231ENST00000641939 PIM3Q86V86 326 aa14.82□□□□□ -0.04
PHGDH-231ENST00000641939 TRAPPC5Q8IUR0 188 aa14.82□□□□□ -0.04
PHGDH-231ENST00000641939 DDHD1Q8NEL9 900 aa14.82□□□□□ -0.04
PHGDH-231ENST00000641939 ZNF398Q8TD17 642 aa14.82□□□□□ -0.04
PHGDH-231ENST00000641939 MAIP1Q8WWC4 291 aa14.82□□□□□ -0.04
PHGDH-231ENST00000641939 PRR11Q96HE9 360 aaPredicted RBP14.82□□□□□ -0.04
PHGDH-231ENST00000641939 SLC38A3Q99624 504 aa14.82□□□□□ -0.04
PHGDH-231ENST00000641939 OSGEPL1Q9H4B0 414 aa14.82□□□□□ -0.04
PHGDH-231ENST00000641939 STN1Q9H668 368 aaKnown RBP14.82□□□□□ -0.04
PHGDH-231ENST00000641939 SARS2Q9NP81 518 aaKnown RBP14.82□□□□□ -0.04
PHGDH-231ENST00000641939 KCNK4Q9NYG8 393 aa14.82□□□□□ -0.04
PHGDH-231ENST00000641939 FKBPLQ9UIM3 349 aa14.82□□□□□ -0.04
PHGDH-231ENST00000641939 A0A087WV48 116 aa14.81□□□□□ -0.04
PHGDH-231ENST00000641939 IGHV1OR21-1A0A087WYE8 117 aa14.81□□□□□ -0.04
PHGDH-231ENST00000641939 ERI2A8K979 691 aaKnown RBP14.81□□□□□ -0.04
PHGDH-231ENST00000641939 LDB2O43679 373 aa14.81□□□□□ -0.04
PHGDH-231ENST00000641939 SRP72O76094 671 aaKnown RBP14.81□□□□□ -0.04
PHGDH-231ENST00000641939 CD1CP29017 333 aa14.81□□□□□ -0.04
PHGDH-231ENST00000641939 RBMS1P29558 406 aaKnown RBP14.81□□□□□ -0.04
PHGDH-231ENST00000641939 CA5AP35218 305 aa14.81□□□□□ -0.04
PHGDH-231ENST00000641939 FDFT1P37268 417 aa14.81□□□□□ -0.04
PHGDH-231ENST00000641939 HADHAP40939 763 aa14.81□□□□□ -0.04
PHGDH-231ENST00000641939 XIAPP98170 497 aa14.81□□□□□ -0.04
PHGDH-231ENST00000641939 HHEXQ03014 270 aa14.81□□□□□ -0.04
PHGDH-231ENST00000641939 ZFP36L1Q07352 338 aaKnown RBP14.81□□□□□ -0.04
PHGDH-231ENST00000641939 SIX1Q15475 284 aaPredicted RBP14.81□□□□□ -0.04
PHGDH-231ENST00000641939 FOXR1Q6PIV2 292 aa14.81□□□□□ -0.04
PHGDH-231ENST00000641939 USP53Q70EK8 1073 aa14.81□□□□□ -0.04
PHGDH-231ENST00000641939 TMPRSS9Q7Z410 1059 aa14.81□□□□□ -0.04
PHGDH-231ENST00000641939 C11orf96Q7Z7L8 435 aa14.81□□□□□ -0.04
PHGDH-231ENST00000641939 SLC9B2Q86UD5 537 aa14.81□□□□□ -0.04
PHGDH-231ENST00000641939 SLITRK4Q8IW52 837 aa14.81□□□□□ -0.04
PHGDH-231ENST00000641939 TAB3Q8N5C8 712 aaPredicted RBP14.81□□□□□ -0.04
PHGDH-231ENST00000641939 RASGEF1AQ8N9B8 481 aa14.81□□□□□ -0.04
PHGDH-231ENST00000641939 AVL9Q8NBF6 648 aa14.81□□□□□ -0.04
PHGDH-231ENST00000641939 OR13C4Q8NGS5 318 aa14.81□□□□□ -0.04
PHGDH-231ENST00000641939 SLC46A1Q96NT5 459 aa14.81□□□□□ -0.04
PHGDH-231ENST00000641939 DCBLD2Q96PD2 775 aa14.81□□□□□ -0.04
PHGDH-231ENST00000641939 ASB8Q9H765 288 aa14.81□□□□□ -0.04
PHGDH-231ENST00000641939 RDH14Q9HBH5 336 aa14.81□□□□□ -0.04
PHGDH-231ENST00000641939 ASCL3Q9NQ33 180 aa14.81□□□□□ -0.04
PHGDH-231ENST00000641939 PRDM8Q9NQV8 689 aa14.81□□□□□ -0.04
PHGDH-231ENST00000641939 THSD1Q9NS62 852 aa14.81□□□□□ -0.04
PHGDH-231ENST00000641939 DNAJC16Q9Y2G8 782 aa14.81□□□□□ -0.04
PHGDH-231ENST00000641939 PMS2P1A4D2B8 440 aa14.8□□□□□ -0.04
PHGDH-231ENST00000641939 PRR19A6NJB7 356 aa14.8□□□□□ -0.04
PHGDH-231ENST00000641939 PLD2O14939 933 aa14.8□□□□□ -0.04
PHGDH-231ENST00000641939 RRP8O43159 456 aaKnown RBP14.8□□□□□ -0.04
PHGDH-231ENST00000641939 KCNJ13O60928 360 aa14.8□□□□□ -0.04
PHGDH-231ENST00000641939 FGGP02679 453 aa14.8□□□□□ -0.04
PHGDH-231ENST00000641939 TPH1P17752 444 aa14.8□□□□□ -0.04
PHGDH-231ENST00000641939 VCLP18206 1134 aa14.8□□□□□ -0.04
PHGDH-231ENST00000641939 MSH3P20585 1137 aa14.8□□□□□ -0.04
PHGDH-231ENST00000641939 EIF2S3P41091 472 aaKnown RBP14.8□□□□□ -0.04
PHGDH-231ENST00000641939 MLLT3P42568 568 aaPredicted RBP14.8□□□□□ -0.04
PHGDH-231ENST00000641939 GPLD1P80108 840 aa14.8□□□□□ -0.04
PHGDH-231ENST00000641939 TMPRSS15P98073 1019 aa14.8□□□□□ -0.04
PHGDH-231ENST00000641939 NFATC2Q13469 925 aa14.8□□□□□ -0.04
PHGDH-231ENST00000641939 SQSTM1Q13501 440 aa14.8□□□□□ -0.04
PHGDH-231ENST00000641939 CCNG2Q16589 344 aa14.8□□□□□ -0.04
PHGDH-231ENST00000641939 PHF19Q5T6S3 580 aa14.8□□□□□ -0.04
PHGDH-231ENST00000641939 DRICH1Q6PGQ1 229 aaPredicted RBP14.8□□□□□ -0.04
PHGDH-231ENST00000641939 RAB11FIP2Q7L804 512 aa14.8□□□□□ -0.04
PHGDH-231ENST00000641939 LINC00523Q86TU6 105 aa14.8□□□□□ -0.04
PHGDH-231ENST00000641939 ZNF761Q86XN6 746 aaPredicted RBP14.8□□□□□ -0.04
PHGDH-231ENST00000641939 FBXO39Q8N4B4 442 aa14.8□□□□□ -0.04
PHGDH-231ENST00000641939 CCDC89Q8N998 374 aa14.8□□□□□ -0.04
PHGDH-231ENST00000641939 SH3KBP1Q96B97 665 aa14.8□□□□□ -0.04
PHGDH-231ENST00000641939 DPYSL5Q9BPU6 564 aa14.8□□□□□ -0.04
PHGDH-231ENST00000641939 NUDT22Q9BRQ3 303 aa14.8□□□□□ -0.04
PHGDH-231ENST00000641939 SEMA6CQ9H3T2 930 aa14.8□□□□□ -0.04
PHGDH-231ENST00000641939 ETNK1Q9HBU6 452 aa14.8□□□□□ -0.04
PHGDH-231ENST00000641939 CPNE7Q9UBL6 633 aa14.8□□□□□ -0.04
PHGDH-231ENST00000641939 ZKSCAN5Q9Y2L8 839 aa14.8□□□□□ -0.04
PHGDH-231ENST00000641939 DNMT3AQ9Y6K1 912 aaPredicted RBP14.8□□□□□ -0.04
PHGDH-231ENST00000641939 OR2AG2A6NM03 316 aa14.79□□□□□ -0.04
PHGDH-231ENST00000641939 AGAP14A8MT82 685 aa14.79□□□□□ -0.04
PHGDH-231ENST00000641939 PDZK1P1A8MUH7 402 aa14.79□□□□□ -0.04
PHGDH-231ENST00000641939 CEP104O60308 925 aa14.79□□□□□ -0.04
PHGDH-231ENST00000641939 XRCC1P18887 633 aaPredicted RBP14.79□□□□□ -0.04
PHGDH-231ENST00000641939 IDSP22304 550 aa14.79□□□□□ -0.04
PHGDH-231ENST00000641939 AKT1P31749 480 aa14.79□□□□□ -0.04
PHGDH-231ENST00000641939 CXCR5P32302 372 aa14.79□□□□□ -0.04
PHGDH-231ENST00000641939 LMAN1P49257 510 aa14.79□□□□□ -0.04
PHGDH-231ENST00000641939 CTSCP53634 463 aa14.79□□□□□ -0.04
PHGDH-231ENST00000641939 PCBP4P57723 403 aaKnown RBP14.79□□□□□ -0.04
PHGDH-231ENST00000641939 UBE2IP63279 158 aaKnown RBP14.79□□□□□ -0.04
PHGDH-231ENST00000641939 SEPT6Q14141 434 aa14.79□□□□□ -0.04
PHGDH-231ENST00000641939 POU6F1Q14863 301 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms