RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 OR1I1O60431 355 aa13.03□□□□□ -0.32
GTF3A-209ENST00000640289 POLBP06746 335 aa13.03□□□□□ -0.32
GTF3A-209ENST00000640289 GIMD1P0DJR0 217 aa13.03□□□□□ -0.32
GTF3A-209ENST00000640289 PAMP19021 973 aa13.03□□□□□ -0.32
GTF3A-209ENST00000640289 AK4P27144 223 aaPredicted RBP13.03□□□□□ -0.32
GTF3A-209ENST00000640289 ECHS1P30084 290 aa13.03□□□□□ -0.32
GTF3A-209ENST00000640289 CARSP49589 748 aaKnown RBP13.03□□□□□ -0.32
GTF3A-209ENST00000640289 ARHGAP8P85298 464 aa13.03□□□□□ -0.32
GTF3A-209ENST00000640289 CTBSQ01459 385 aa13.03□□□□□ -0.32
GTF3A-209ENST00000640289 SLC14A1Q13336 389 aa13.03□□□□□ -0.32
GTF3A-209ENST00000640289 CRYMQ14894 314 aa13.03□□□□□ -0.32
GTF3A-209ENST00000640289 DEFB133Q30KQ1 61 aa13.03□□□□□ -0.32
GTF3A-209ENST00000640289 TMEM220Q6QAJ8 160 aa13.03□□□□□ -0.32
GTF3A-209ENST00000640289 UNC5AQ6ZN44 842 aa13.03□□□□□ -0.32
GTF3A-209ENST00000640289 DBX2Q6ZNG2 339 aa13.03□□□□□ -0.32
GTF3A-209ENST00000640289 LRRTM4Q86VH4 590 aa13.03□□□□□ -0.32
GTF3A-209ENST00000640289 CCDC25Q86WR0 208 aa13.03□□□□□ -0.32
GTF3A-209ENST00000640289 NRROSQ86YC3 692 aa13.03□□□□□ -0.32
GTF3A-209ENST00000640289 TRAPPC5Q8IUR0 188 aa13.03□□□□□ -0.32
GTF3A-209ENST00000640289 ZNF547Q8IVP9 402 aa13.03□□□□□ -0.32
GTF3A-209ENST00000640289 FSTL5Q8N475 847 aaPredicted RBP13.03□□□□□ -0.32
GTF3A-209ENST00000640289 OTUD6BQ8N6M0 293 aa13.03□□□□□ -0.32
GTF3A-209ENST00000640289 BEND7Q8N7W2 519 aaPredicted RBP13.03□□□□□ -0.32
GTF3A-209ENST00000640289 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.03□□□□□ -0.32
GTF3A-209ENST00000640289 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.03□□□□□ -0.32
GTF3A-209ENST00000640289 LRRC39Q96DD0 335 aa13.03□□□□□ -0.32
GTF3A-209ENST00000640289 SGF29Q96ES7 293 aa13.03□□□□□ -0.32
GTF3A-209ENST00000640289 SGSM3Q96HU1 749 aa13.03□□□□□ -0.32
GTF3A-209ENST00000640289 CAMK1GQ96NX5 476 aa13.03□□□□□ -0.32
GTF3A-209ENST00000640289 ZCCHC2Q9C0B9 1178 aaKnown RBP13.03□□□□□ -0.32
GTF3A-209ENST00000640289 RMI1Q9H9A7 625 aa13.03□□□□□ -0.32
GTF3A-209ENST00000640289 C20orf96Q9NUD7 363 aaPredicted RBP13.03□□□□□ -0.32
GTF3A-209ENST00000640289 PCDHGB2Q9Y5G2 931 aa13.03□□□□□ -0.32
GTF3A-209ENST00000640289 PRSS21Q9Y6M0 314 aa13.03□□□□□ -0.32
GTF3A-209ENST00000640289 RALGAPA1Q6GYQ0 2036 aa13.03□□□□□ -0.32
GTF3A-209ENST00000640289 IGLV3-16A0A075B6K0 115 aa13.02□□□□□ -0.33
GTF3A-209ENST00000640289 GPR89AB7ZAQ6 455 aa13.02□□□□□ -0.33
GTF3A-209ENST00000640289 TRIM38O00635 465 aa13.02□□□□□ -0.33
GTF3A-209ENST00000640289 YY2O15391 372 aa13.02□□□□□ -0.33
GTF3A-209ENST00000640289 SGTAO43765 313 aa13.02□□□□□ -0.33
GTF3A-209ENST00000640289 GPR89BP0CG08 455 aa13.02□□□□□ -0.33
GTF3A-209ENST00000640289 ACP5P13686 325 aa13.02□□□□□ -0.33
GTF3A-209ENST00000640289 ATP1B2P14415 290 aaPredicted RBP13.02□□□□□ -0.33
GTF3A-209ENST00000640289 PI4KAP42356 2102 aa13.02□□□□□ -0.33
GTF3A-209ENST00000640289 CBLBQ13191 982 aa13.02□□□□□ -0.33
GTF3A-209ENST00000640289 HLTFQ14527 1009 aaKnown RBP eCLIP13.02□□□□□ -0.33
GTF3A-209ENST00000640289 SUZ12Q15022 739 aaKnown RBP13.02□□□□□ -0.33
GTF3A-209ENST00000640289 ELOCQ15369 112 aa13.02□□□□□ -0.33
GTF3A-209ENST00000640289 LONRF1Q17RB8 773 aa13.02□□□□□ -0.33
GTF3A-209ENST00000640289 RSPO4Q2I0M5 234 aaPredicted RBP13.02□□□□□ -0.33
GTF3A-209ENST00000640289 SPANXN3Q5MJ09 141 aa13.02□□□□□ -0.33
GTF3A-209ENST00000640289 STEAP4Q687X5 459 aa13.02□□□□□ -0.33
GTF3A-209ENST00000640289 CAPN12Q6ZSI9 719 aa13.02□□□□□ -0.33
GTF3A-209ENST00000640289 TAF8Q7Z7C8 310 aa13.02□□□□□ -0.33
GTF3A-209ENST00000640289 C11orf96Q7Z7L8 435 aa13.02□□□□□ -0.33
GTF3A-209ENST00000640289 KCNMB4Q86W47 210 aa13.02□□□□□ -0.33
GTF3A-209ENST00000640289 CCNJLQ8IV13 435 aa13.02□□□□□ -0.33
GTF3A-209ENST00000640289 NAXDQ8IW45 347 aa13.02□□□□□ -0.33
GTF3A-209ENST00000640289 CLDN19Q8N6F1 224 aa13.02□□□□□ -0.33
GTF3A-209ENST00000640289 EID2Q8N6I1 236 aa13.02□□□□□ -0.33
GTF3A-209ENST00000640289 GPBAR1Q8TDU6 330 aa13.02□□□□□ -0.33
GTF3A-209ENST00000640289 SETD7Q8WTS6 366 aaKnown RBP13.02□□□□□ -0.33
GTF3A-209ENST00000640289 DCUN1D1Q96GG9 259 aa13.02□□□□□ -0.33
GTF3A-209ENST00000640289 NAT9Q9BTE0 207 aa13.02□□□□□ -0.33
GTF3A-209ENST00000640289 TRNAU1APQ9NX07 287 aaKnown RBP13.02□□□□□ -0.33
GTF3A-209ENST00000640289 SLC23A2Q9UGH3 650 aa13.02□□□□□ -0.33
GTF3A-209ENST00000640289 KCNK6Q9Y257 313 aa13.02□□□□□ -0.33
GTF3A-209ENST00000640289 TP53BP1Q12888 1972 aaPredicted RBP13.01□□□□□ -0.33
GTF3A-209ENST00000640289 CFAP99D6REC4 459 aa13.01□□□□□ -0.33
GTF3A-209ENST00000640289 KMOO15229 486 aa13.01□□□□□ -0.33
GTF3A-209ENST00000640289 EIF3HO15372 352 aaKnown RBP eCLIP13.01□□□□□ -0.33
GTF3A-209ENST00000640289 FLRT2O43155 660 aa13.01□□□□□ -0.33
GTF3A-209ENST00000640289 SLU7O95391 586 aaKnown RBP13.01□□□□□ -0.33
GTF3A-209ENST00000640289 TTC4O95801 387 aa13.01□□□□□ -0.33
GTF3A-209ENST00000640289 ANXA6P08133 673 aa13.01□□□□□ -0.33
GTF3A-209ENST00000640289 ERVK-10P10266 1014 aa13.01□□□□□ -0.33
GTF3A-209ENST00000640289 RALBP11234 206 aa13.01□□□□□ -0.33
GTF3A-209ENST00000640289 PBLDP30039 288 aaPredicted RBP13.01□□□□□ -0.33
GTF3A-209ENST00000640289 ACTR1BP42025 376 aa13.01□□□□□ -0.33
GTF3A-209ENST00000640289 ACTR1AP61163 376 aa13.01□□□□□ -0.33
GTF3A-209ENST00000640289 ILF3Q12906 894 aaKnown RBP eCLIP13.01□□□□□ -0.33
GTF3A-209ENST00000640289 THOC5Q13769 683 aaKnown RBP13.01□□□□□ -0.33
GTF3A-209ENST00000640289 ITIH4Q14624 930 aa13.01□□□□□ -0.33
GTF3A-209ENST00000640289 INSCQ1MX18 579 aa13.01□□□□□ -0.33
GTF3A-209ENST00000640289 HSP90AA5PQ58FG0 334 aa13.01□□□□□ -0.33
GTF3A-209ENST00000640289 AARS2Q5JTZ9 985 aaKnown RBP13.01□□□□□ -0.33
GTF3A-209ENST00000640289 ZNF470Q6ECI4 717 aa13.01□□□□□ -0.33
GTF3A-209ENST00000640289 NEPROQ6NW34 567 aa13.01□□□□□ -0.33
GTF3A-209ENST00000640289 TRMT10BQ6PF06 316 aaKnown RBP13.01□□□□□ -0.33
GTF3A-209ENST00000640289 SLC30A9Q6PML9 568 aa13.01□□□□□ -0.33
GTF3A-209ENST00000640289 CERS6Q6ZMG9 384 aa13.01□□□□□ -0.33
GTF3A-209ENST00000640289 GKN2Q86XP6 184 aa13.01□□□□□ -0.33
GTF3A-209ENST00000640289 DENND6AQ8IWF6 608 aa13.01□□□□□ -0.33
GTF3A-209ENST00000640289 SFTPA2Q8IWL1 248 aa13.01□□□□□ -0.33
GTF3A-209ENST00000640289 GPR150Q8NGU9 434 aa13.01□□□□□ -0.33
GTF3A-209ENST00000640289 RHBDD1Q8TEB9 315 aa13.01□□□□□ -0.33
GTF3A-209ENST00000640289 PYROXD1Q8WU10 500 aa13.01□□□□□ -0.33
GTF3A-209ENST00000640289 C9orf72Q96LT7 481 aa13.01□□□□□ -0.33
GTF3A-209ENST00000640289 GSDMCQ9BYG8 508 aa13.01□□□□□ -0.33
GTF3A-209ENST00000640289 IARS2Q9NSE4 1012 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms