RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 TEX38Q6PEX7 206 aa6.33□□□□□ -1.4
RFC1-217ENST00000639695 TMEM173Q86WV6 379 aaPredicted RBP6.33□□□□□ -1.4
RFC1-217ENST00000639695 SRRM1Q8IYB3 904 aaKnown RBP6.33□□□□□ -1.4
RFC1-217ENST00000639695 DSELQ8IZU8 1212 aa6.33□□□□□ -1.4
RFC1-217ENST00000639695 GALNT16Q8N428 558 aa6.33□□□□□ -1.4
RFC1-217ENST00000639695 ATAD1Q8NBU5 361 aa6.33□□□□□ -1.4
RFC1-217ENST00000639695 CSNK2A3Q8NEV1 391 aa6.33□□□□□ -1.4
RFC1-217ENST00000639695 SEMA6DQ8NFY4 1073 aa6.33□□□□□ -1.4
RFC1-217ENST00000639695 FIBINQ8TAL6 211 aa6.33□□□□□ -1.4
RFC1-217ENST00000639695 TAS1R2Q8TE23 839 aa6.33□□□□□ -1.4
RFC1-217ENST00000639695 APBB2Q92870 758 aa6.33□□□□□ -1.4
RFC1-217ENST00000639695 HES6Q96HZ4 224 aa6.33□□□□□ -1.4
RFC1-217ENST00000639695 MS4A10Q96PG2 267 aa6.33□□□□□ -1.4
RFC1-217ENST00000639695 ESRP2Q9H6T0 727 aaKnown RBP6.33□□□□□ -1.4
RFC1-217ENST00000639695 SEMA4GQ9NTN9 838 aa6.33□□□□□ -1.4
RFC1-217ENST00000639695 ABCB8Q9NUT2 735 aa6.33□□□□□ -1.4
RFC1-217ENST00000639695 TRMT1Q9NXH9 659 aaKnown RBP6.33□□□□□ -1.4
RFC1-217ENST00000639695 LEF1Q9UJU2 399 aaPredicted RBP6.33□□□□□ -1.4
RFC1-217ENST00000639695 IGSF1Q8N6C5 1336 aa6.32□□□□□ -1.4
RFC1-217ENST00000639695 A0A087WV48 116 aa6.32□□□□□ -1.4
RFC1-217ENST00000639695 ENO4A6NNW6 628 aa6.32□□□□□ -1.4
RFC1-217ENST00000639695 KDM4EB2RXH2 506 aaPredicted RBP6.32□□□□□ -1.4
RFC1-217ENST00000639695 DDX39AO00148 427 aaKnown RBP6.32□□□□□ -1.4
RFC1-217ENST00000639695 EGFP01133 1207 aa6.32□□□□□ -1.4
RFC1-217ENST00000639695 GBAP04062 536 aa6.32□□□□□ -1.4
RFC1-217ENST00000639695 SUPT20HL2P0C7V6 817 aa6.32□□□□□ -1.4
RFC1-217ENST00000639695 G6PDP11413 515 aa6.32□□□□□ -1.4
RFC1-217ENST00000639695 CHRNB2P17787 502 aa6.32□□□□□ -1.4
RFC1-217ENST00000639695 NMBRP28336 390 aa6.32□□□□□ -1.4
RFC1-217ENST00000639695 SPOCK1Q08629 439 aa6.32□□□□□ -1.4
RFC1-217ENST00000639695 MEP1AQ16819 746 aa6.32□□□□□ -1.4
RFC1-217ENST00000639695 SUPT20HL1Q3ZLR7 823 aa6.32□□□□□ -1.4
RFC1-217ENST00000639695 ANKRD20A4Q4UJ75 823 aa6.32□□□□□ -1.4
RFC1-217ENST00000639695 ANKRD20A8PQ5CZ79 823 aa6.32□□□□□ -1.4
RFC1-217ENST00000639695 ANKRD20A2Q5SQ80 823 aa6.32□□□□□ -1.4
RFC1-217ENST00000639695 ANKRD20A1Q5TYW2 823 aa6.32□□□□□ -1.4
RFC1-217ENST00000639695 ANKRD20A3Q5VUR7 823 aa6.32□□□□□ -1.4
RFC1-217ENST00000639695 ALKBH5Q6P6C2 394 aaKnown RBP6.32□□□□□ -1.4
RFC1-217ENST00000639695 PAPD4Q6PIY7 484 aaKnown RBP6.32□□□□□ -1.4
RFC1-217ENST00000639695 HOOK3Q86VS8 718 aa6.32□□□□□ -1.4
RFC1-217ENST00000639695 TIGD4Q8IY51 512 aa6.32□□□□□ -1.4
RFC1-217ENST00000639695 ARRDC2Q8TBH0 407 aa6.32□□□□□ -1.4
RFC1-217ENST00000639695 ROBO4Q8WZ75 1007 aa6.32□□□□□ -1.4
RFC1-217ENST00000639695 KRT35Q92764 455 aa6.32□□□□□ -1.4
RFC1-217ENST00000639695 CORO2AQ92828 525 aa6.32□□□□□ -1.4
RFC1-217ENST00000639695 EXT2Q93063 718 aa6.32□□□□□ -1.4
RFC1-217ENST00000639695 CABS1Q96KC9 395 aa6.32□□□□□ -1.4
RFC1-217ENST00000639695 WDR77Q9BQA1 342 aaPredicted RBP6.32□□□□□ -1.4
RFC1-217ENST00000639695 ACAT2Q9BWD1 397 aa6.32□□□□□ -1.4
RFC1-217ENST00000639695 IL1RAPL2Q9NP60 686 aa6.32□□□□□ -1.4
RFC1-217ENST00000639695 HEY2Q9UBP5 337 aa6.32□□□□□ -1.4
RFC1-217ENST00000639695 SLC9A2Q9UBY0 812 aa6.32□□□□□ -1.4
RFC1-217ENST00000639695 MOSPD1Q9UJG1 213 aa6.32□□□□□ -1.4
RFC1-217ENST00000639695 CDH7Q9ULB5 785 aa6.32□□□□□ -1.4
RFC1-217ENST00000639695 SNX7Q9UNH6 387 aa6.32□□□□□ -1.4
RFC1-217ENST00000639695 SRPRBQ9Y5M8 271 aaKnown RBP6.32□□□□□ -1.4
RFC1-217ENST00000639695 DNAJC9-AS1A6NH13 148 aa6.31□□□□□ -1.4
RFC1-217ENST00000639695 PROP1O75360 226 aa6.31□□□□□ -1.4
RFC1-217ENST00000639695 PSMA3P25788 255 aa6.31□□□□□ -1.4
RFC1-217ENST00000639695 PIGAP37287 484 aa6.31□□□□□ -1.4
RFC1-217ENST00000639695 ID2Q02363 134 aa6.31□□□□□ -1.4
RFC1-217ENST00000639695 NHLH1Q02575 133 aa6.31□□□□□ -1.4
RFC1-217ENST00000639695 ZNF91Q05481 1191 aa6.31□□□□□ -1.4
RFC1-217ENST00000639695 FOXM1Q08050 763 aa6.31□□□□□ -1.4
RFC1-217ENST00000639695 RCN2Q14257 317 aa6.31□□□□□ -1.4
RFC1-217ENST00000639695 VWC2Q2TAL6 325 aa6.31□□□□□ -1.4
RFC1-217ENST00000639695 TTC31Q49AM3 519 aaPredicted RBP6.31□□□□□ -1.4
RFC1-217ENST00000639695 ATP13A5Q4VNC0 1218 aa6.31□□□□□ -1.4
RFC1-217ENST00000639695 NSUN5P2Q63ZY6 315 aa6.31□□□□□ -1.4
RFC1-217ENST00000639695 ZBTB49Q6ZSB9 765 aa6.31□□□□□ -1.4
RFC1-217ENST00000639695 MON1BQ7L1V2 547 aa6.31□□□□□ -1.4
RFC1-217ENST00000639695 SHFQ7M4L6 423 aa6.31□□□□□ -1.4
RFC1-217ENST00000639695 SYCP3Q8IZU3 236 aa6.31□□□□□ -1.4
RFC1-217ENST00000639695 TMEM174Q8WUU8 243 aa6.31□□□□□ -1.4
RFC1-217ENST00000639695 TRIB2Q92519 343 aa6.31□□□□□ -1.4
RFC1-217ENST00000639695 ATP6V0A1Q93050 837 aa6.31□□□□□ -1.4
RFC1-217ENST00000639695 SIGLEC11Q96RL6 698 aa6.31□□□□□ -1.4
RFC1-217ENST00000639695 SEPHS2Q99611 448 aa6.31□□□□□ -1.4
RFC1-217ENST00000639695 SEMA3CQ99985 751 aa6.31□□□□□ -1.4
RFC1-217ENST00000639695 ABHD6Q9BV23 337 aa6.31□□□□□ -1.4
RFC1-217ENST00000639695 MOV10L1Q9BXT6 1211 aaKnown RBP6.31□□□□□ -1.4
RFC1-217ENST00000639695 EQTNQ9NQ60 294 aa6.31□□□□□ -1.4
RFC1-217ENST00000639695 TMEM51Q9NW97 253 aa6.31□□□□□ -1.4
RFC1-217ENST00000639695 OR6C3Q9NZP0 311 aa6.31□□□□□ -1.4
RFC1-217ENST00000639695 KCNK7Q9Y2U2 307 aa6.31□□□□□ -1.4
RFC1-217ENST00000639695 HS3ST1O14792 307 aa6.3□□□□□ -1.4
RFC1-217ENST00000639695 SLC16A5O15375 505 aa6.3□□□□□ -1.4
RFC1-217ENST00000639695 SPINT2O43291 252 aa6.3□□□□□ -1.4
RFC1-217ENST00000639695 KERAO60938 352 aa6.3□□□□□ -1.4
RFC1-217ENST00000639695 KCNK5O95279 499 aa6.3□□□□□ -1.4
RFC1-217ENST00000639695 ZFYP08048 801 aaPredicted RBP6.3□□□□□ -1.4
RFC1-217ENST00000639695 VIMP08670 466 aaKnown RBP6.3□□□□□ -1.4
RFC1-217ENST00000639695 CHRNB1P11230 501 aa6.3□□□□□ -1.4
RFC1-217ENST00000639695 CDC25CP30307 473 aa6.3□□□□□ -1.4
RFC1-217ENST00000639695 EIF2S3P41091 472 aaKnown RBP6.3□□□□□ -1.4
RFC1-217ENST00000639695 MTHFRP42898 656 aa6.3□□□□□ -1.4
RFC1-217ENST00000639695 LIMK1P53667 647 aa6.3□□□□□ -1.4
RFC1-217ENST00000639695 NAGLUP54802 743 aa6.3□□□□□ -1.4
RFC1-217ENST00000639695 ADORA2A-AS1P86434 159 aa6.3□□□□□ -1.4
RFC1-217ENST00000639695 TFF2Q03403 129 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms