RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 C1DQ13901 141 aaKnown RBP8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 NR1D2Q14995 579 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 SPATS1Q496A3 300 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 DEPDC1Q5TB30 811 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 ZDHHC20Q5W0Z9 365 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 CHADLQ6NUI6 762 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 ZCCHC8Q6NZY4 707 aaKnown RBP8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 ZNF540Q8NDQ6 660 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 ARNTL2Q8WYA1 636 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 CHID1Q9BWS9 393 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 KLHL25Q9H0H3 589 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 POPDC3Q9HBV1 291 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 MTMR10Q9NXD2 777 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 ACTR3BQ9P1U1 418 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 TSC22D4Q9Y3Q8 395 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 SAMHD1Q9Y3Z3 626 aaKnown RBP8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 TRAV19A0A0A6YYK7 116 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 PNMA8CA0A1B0GUJ8 204 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 A6NHS1 94 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 EPOP01588 193 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 MT-ND1P03886 318 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 GSNP06396 782 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 NCK1P16333 377 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 PPP2R1BP30154 601 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 SPAM1P38567 509 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 RPL3P39023 403 aaKnown RBP8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 IKBKEQ14164 716 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 TECRLQ5HYJ1 363 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 ZNF678Q5SXM1 525 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 SULT1C3Q6IMI6 304 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 UBE2R2Q712K3 238 aaPredicted RBP8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 ERMP1Q7Z2K6 904 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 NPWQ8N729 165 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 S100ZQ8WXG8 99 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 PEX13Q92968 403 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 OTULINQ96BN8 352 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 IL12RB2Q99665 862 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 ZIM2Q9NZV7 527 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 IFT80Q9P2H3 777 aaPredicted RBP8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 ZNF510Q9Y2H8 683 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 COL5A3P25940 1745 aaPredicted RBP8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 ARPC2O15144 300 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 SGTAO43765 313 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 ECI2O75521 394 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 CLDN9O95484 217 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 TBX18O95935 607 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 NTRK1P04629 796 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 RAP2AP10114 183 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 GSSP48637 474 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 PFKPQ01813 784 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 SULT2A1Q06520 285 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 TIMM50Q3ZCQ8 353 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 PKDCCQ504Y2 493 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 GDF6Q6KF10 455 aaPredicted RBP8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 TRNP1Q6NT89 227 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 DET1Q7L5Y6 550 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 GPRIN1Q7Z2K8 1008 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 PIM3Q86V86 326 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 SVOPLQ8N434 492 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 OR9I1Q8NGQ6 314 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 OR6K2Q8NGY2 324 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 SLC13A3Q8WWT9 602 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 UPF1Q92900 1129 aaKnown RBP eCLIP8.51□□□□□ -1.052e-11■■■□□ 14.6
HNRNPU-219ENST00000639628 TSSK3Q96PN8 268 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 KIAA1522Q9P206 1035 aaPredicted RBP8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 PDZK1P1A8MUH7 402 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 G3V2L1 256 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 UGT2B11O75310 529 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 IL6P05231 212 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 SELPP16109 830 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 GM2AP17900 193 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 KIR3DL1P43629 444 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 CLCN2P51788 898 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 STC1P52823 247 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 SP3Q02447 781 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 ACOX1Q15067 660 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 UPP1Q16831 310 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 XKR6Q5GH73 641 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 MS4A13Q5J8X5 152 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 ERICH5Q6P6B1 374 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 KLHDC10Q6PID8 442 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 LINGO4Q6UY18 593 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 PRR23BQ6ZRT6 265 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 HID1Q8IV36 788 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 UMODL1-AS1Q8N2C9 162 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 MARVELD2Q8N4S9 558 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 FBXO27Q8NI29 283 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 MZB1Q8WU39 189 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 KIAA1191Q96A73 305 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 REXO5Q96IC2 774 aaKnown RBP8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 MRGPRX2Q96LB1 330 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 SLC39A3Q9BRY0 314 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 PRRG3Q9BZD7 231 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 DERL2Q9GZP9 239 aa8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 C6orf62Q9GZU0 229 aaPredicted RBP8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 POLR3BQ9NW08 1133 aaPredicted RBP8.51□□□□□ -1.05
HNRNPU-219ENST00000639628 MYO18AQ92614 2054 aaKnown RBP8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 LCHNA4D1U4 455 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 SLC38A8A6NNN8 435 aa8.5□□□□□ -1.05
HNRNPU-219ENST00000639628 EI24O14681 340 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms