RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 PIGFQ07326 219 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 ITGADQ13349 1161 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 CYP2A13Q16696 494 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 IMPG1Q17R60 797 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 SETMARQ53H47 684 aaPredicted RBP10.82□□□□□ -0.68
SNIP1-204ENST00000638725 EGFLAMQ63HQ2 1017 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 AGMOQ6ZNB7 445 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 R3HCC1LQ7Z5L2 792 aaKnown RBP10.82□□□□□ -0.68
SNIP1-204ENST00000638725 IGFN1Q86VF2 1251 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 DTWD1Q8N5C7 304 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 LEMD2Q8NC56 503 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 STAG3L4Q8TBR4 150 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 PPM1MQ96MI6 270 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 SEMA3CQ99985 751 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 NEURL2Q9BR09 285 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 BEGAINQ9BUH8 593 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 LRRC3Q9BY71 257 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 CATSPERZQ9NTU4 200 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 RIC8BQ9NVN3 520 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 SUN2Q9UH99 717 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 PSME2Q9UL46 239 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 SLC30A1Q9Y6M5 507 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 DYTNA2CJ06 578 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 TYW5A2RUC4 315 aaKnown RBP10.82□□□□□ -0.68
SNIP1-204ENST00000638725 RPP40O75818 363 aaKnown RBP10.82□□□□□ -0.68
SNIP1-204ENST00000638725 CLPXO76031 633 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 CRHBPP24387 322 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 STC1P52823 247 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 IST1P53990 364 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 PLIN5Q00G26 463 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 RBBP7Q16576 425 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 METTL23Q86XA0 190 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 FNDC5Q8NAU1 212 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 OR4L1Q8NH43 312 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 PROKR1Q8TCW9 393 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 RAB2BQ8WUD1 216 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 ISG20Q96AZ6 181 aaKnown RBP10.82□□□□□ -0.68
SNIP1-204ENST00000638725 POPDC3Q9HBV1 291 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 PALMDQ9NP74 551 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 GALPQ9UBC7 116 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 ERGIC3Q9Y282 383 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 MED16Q9Y2X0 877 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 ASB1Q9Y576 335 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 DGKBQ9Y6T7 804 aa10.82□□□□□ -0.68
SNIP1-204ENST00000638725 FAM234BA2RU67 622 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 C17orf102A2RUQ5 167 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 TNFRSF10BO14763 440 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 MUSKO15146 869 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 DEAF1O75398 565 aaPredicted RBP10.81□□□□□ -0.68
SNIP1-204ENST00000638725 ESRRBO95718 433 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 POMCP01189 267 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 OR4Q2P0C623 313 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 PLA2G16P53816 162 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 ERVK-8P63133 956 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 AQP6Q13520 282 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 SPIDRQ14159 915 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 GRB14Q14449 540 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 SPCS2Q15005 226 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 CRY1Q16526 586 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 FXNQ16595 210 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 RGS21Q2M5E4 152 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 SDHAF4Q5VUM1 108 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 GTF2IRD2BQ6EKJ0 949 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 MSANTD2Q6P1R3 559 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 THAP5Q7Z6K1 395 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 GTF2IRD2Q86UP8 949 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 CIR1Q86X95 450 aaPredicted RBP10.81□□□□□ -0.68
SNIP1-204ENST00000638725 HID1Q8IV36 788 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 ZNF683Q8IZ20 524 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 SPARTQ8N0X7 666 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 FAM86B1Q8N7N1 296 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 GPR150Q8NGU9 434 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 FUBP1Q96AE4 644 aaKnown RBP10.81□□□□□ -0.68
SNIP1-204ENST00000638725 TADA1Q96BN2 335 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 NRBF2Q96F24 287 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 HGH1Q9BTY7 390 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 ZYG11BQ9C0D3 744 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 DERL2Q9GZP9 239 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 CCDC68Q9H2F9 335 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 TOR3AQ9H497 397 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 GPN2Q9H9Y4 310 aaPredicted RBP10.81□□□□□ -0.68
SNIP1-204ENST00000638725 CARS2Q9HA77 564 aaKnown RBP10.81□□□□□ -0.68
SNIP1-204ENST00000638725 SMURF2Q9HAU4 748 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 PRDM5Q9NQX1 630 aaPredicted RBP10.81□□□□□ -0.68
SNIP1-204ENST00000638725 WARS2Q9UGM6 360 aaKnown RBP10.81□□□□□ -0.68
SNIP1-204ENST00000638725 MAGEL2Q9UJ55 1249 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 PCTPQ9UKL6 214 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 ST3GAL5Q9UNP4 418 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 HAS3O00219 553 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 BTN3A1O00481 513 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 OR4F21O95013 312 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 CHEK2O96017 543 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 HTR1AP08908 422 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 UROSP10746 265 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 HOXB8P17481 243 aaPredicted RBP10.81□□□□□ -0.68
SNIP1-204ENST00000638725 CDH3P22223 829 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 NFKBIAP25963 317 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 RXRGP48443 463 aa10.81□□□□□ -0.68
SNIP1-204ENST00000638725 NRG1Q02297 640 aaPredicted RBP10.81□□□□□ -0.68
SNIP1-204ENST00000638725 KCNC4Q03721 635 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms