RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 ZNF547Q8IVP9 402 aa18.19■□□□□ 0.5
CLN6-220ENST00000637450 VSTM4Q8IW00 320 aa18.19■□□□□ 0.5
CLN6-220ENST00000637450 TIMM29Q9BSF4 260 aa18.19■□□□□ 0.5
CLN6-220ENST00000637450 TRIT1Q9H3H1 467 aaKnown RBP18.19■□□□□ 0.5
CLN6-220ENST00000637450 GPN2Q9H9Y4 310 aaPredicted RBP18.19■□□□□ 0.5
CLN6-220ENST00000637450 SIDT1Q9NXL6 827 aaKnown RBP18.19■□□□□ 0.5
CLN6-220ENST00000637450 TMPRSS11EQ9UL52 423 aa18.19■□□□□ 0.5
CLN6-220ENST00000637450 SLC30A1Q9Y6M5 507 aa18.19■□□□□ 0.5
CLN6-220ENST00000637450 A0A0A6YYK5 440 aaPredicted RBP18.18■□□□□ 0.5
CLN6-220ENST00000637450 NKX2-8O15522 239 aa18.18■□□□□ 0.5
CLN6-220ENST00000637450 MTX2O75431 263 aa18.18■□□□□ 0.5
CLN6-220ENST00000637450 PMPCBO75439 489 aa18.18■□□□□ 0.5
CLN6-220ENST00000637450 STK17BO94768 372 aa18.18■□□□□ 0.5
CLN6-220ENST00000637450 UBXN7O94888 489 aa18.18■□□□□ 0.5
CLN6-220ENST00000637450 CDK14O94921 469 aa18.18■□□□□ 0.5
CLN6-220ENST00000637450 DLGAP3O95886 979 aa18.18■□□□□ 0.5
CLN6-220ENST00000637450 VIPP01282 170 aa18.18■□□□□ 0.5
CLN6-220ENST00000637450 NOP2P46087 812 aaKnown RBP18.18■□□□□ 0.5
CLN6-220ENST00000637450 NR2C2P49116 596 aa18.18■□□□□ 0.5
CLN6-220ENST00000637450 GFERP55789 205 aa18.18■□□□□ 0.5
CLN6-220ENST00000637450 POLE2P56282 527 aa18.18■□□□□ 0.5
CLN6-220ENST00000637450 ABHD18Q0P651 414 aa18.18■□□□□ 0.5
CLN6-220ENST00000637450 PRKD1Q15139 912 aaPredicted RBP18.18■□□□□ 0.5
CLN6-220ENST00000637450 TAZQ16635 292 aa18.18■□□□□ 0.5
CLN6-220ENST00000637450 PLA2G4EQ3MJ16 856 aa18.18■□□□□ 0.5
CLN6-220ENST00000637450 KHDC1Q4VXA5 237 aaKnown RBP18.18■□□□□ 0.5
CLN6-220ENST00000637450 ODF2Q5BJF6 829 aa18.18■□□□□ 0.5
CLN6-220ENST00000637450 ABRAXAS1Q6UWZ7 409 aa18.18■□□□□ 0.5
CLN6-220ENST00000637450 BZW1Q7L1Q6 419 aaKnown RBP18.18■□□□□ 0.5
CLN6-220ENST00000637450 KIAA1143Q96AT1 154 aaPredicted RBP18.18■□□□□ 0.5
CLN6-220ENST00000637450 C9orf72Q96LT7 481 aa18.18■□□□□ 0.5
CLN6-220ENST00000637450 CATSPER2Q96P56 530 aa18.18■□□□□ 0.5
CLN6-220ENST00000637450 VPS35Q96QK1 796 aa18.18■□□□□ 0.5
CLN6-220ENST00000637450 EFHD1Q9BUP0 239 aa18.18■□□□□ 0.5
CLN6-220ENST00000637450 TRIM4Q9C037 500 aa18.18■□□□□ 0.5
CLN6-220ENST00000637450 UBP1Q9NZI7 540 aa18.18■□□□□ 0.5
CLN6-220ENST00000637450 SAE1Q9UBE0 346 aaPredicted RBP18.18■□□□□ 0.5
CLN6-220ENST00000637450 DNAJC16Q9Y2G8 782 aa18.18■□□□□ 0.5
CLN6-220ENST00000637450 HYOU1Q9Y4L1 999 aa18.18■□□□□ 0.5
CLN6-220ENST00000637450 LOC285095A0A1B0GVY8 99 aa18.17■□□□□ 0.5
CLN6-220ENST00000637450 PDZK1P1A8MUH7 402 aa18.17■□□□□ 0.5
CLN6-220ENST00000637450 TOX3O15405 576 aaPredicted RBP18.17■□□□□ 0.5
CLN6-220ENST00000637450 MFAP3LO75121 409 aa18.17■□□□□ 0.5
CLN6-220ENST00000637450 TPM1P09493 284 aa18.17■□□□□ 0.5
CLN6-220ENST00000637450 TNNT1P13805 278 aa18.17■□□□□ 0.5
CLN6-220ENST00000637450 BRAFP15056 766 aa18.17■□□□□ 0.5
CLN6-220ENST00000637450 TYRP1P17643 537 aa18.17■□□□□ 0.5
CLN6-220ENST00000637450 COMTP21964 271 aa18.17■□□□□ 0.5
CLN6-220ENST00000637450 CD68P34810 354 aaPredicted RBP18.17■□□□□ 0.5
CLN6-220ENST00000637450 HMGCLP35914 325 aa18.17■□□□□ 0.5
CLN6-220ENST00000637450 CDKN2BP42772 138 aa18.17■□□□□ 0.5
CLN6-220ENST00000637450 CCR10P46092 362 aa18.17■□□□□ 0.5
CLN6-220ENST00000637450 ATP13A5Q4VNC0 1218 aa18.17■□□□□ 0.5
CLN6-220ENST00000637450 WASH2PQ6VEQ5 465 aa18.17■□□□□ 0.5
CLN6-220ENST00000637450 TRIM48Q8IWZ4 208 aa18.17■□□□□ 0.5
CLN6-220ENST00000637450 UNC5BQ8IZJ1 945 aa18.17■□□□□ 0.5
CLN6-220ENST00000637450 BPIFA1Q9NP55 256 aa18.17■□□□□ 0.5
CLN6-220ENST00000637450 WASH6PQ9NQA3 447 aa18.17■□□□□ 0.5
CLN6-220ENST00000637450 FAM153AQ9UHL3 310 aa18.17■□□□□ 0.5
CLN6-220ENST00000637450 TUBD1Q9UJT1 453 aa18.17■□□□□ 0.5
CLN6-220ENST00000637450 INTUQ9ULD6 942 aa18.17■□□□□ 0.5
CLN6-220ENST00000637450 EPOP01588 193 aa18.16■□□□□ 0.5
CLN6-220ENST00000637450 AMD1P17707 334 aa18.16■□□□□ 0.5
CLN6-220ENST00000637450 IDSP22304 550 aa18.16■□□□□ 0.5
CLN6-220ENST00000637450 RPL10P27635 214 aaKnown RBP18.16■□□□□ 0.5
CLN6-220ENST00000637450 WASHC5Q12768 1159 aa18.16■□□□□ 0.5
CLN6-220ENST00000637450 TMEM115Q12893 351 aaPredicted RBP18.16■□□□□ 0.5
CLN6-220ENST00000637450 KCNAB2Q13303 367 aa18.16■□□□□ 0.5
CLN6-220ENST00000637450 TFDP2Q14188 446 aa18.16■□□□□ 0.5
CLN6-220ENST00000637450 MAP7Q14244 749 aa18.16■□□□□ 0.5
CLN6-220ENST00000637450 SEPT7Q16181 437 aaKnown RBP18.16■□□□□ 0.5
CLN6-220ENST00000637450 AGAP9Q5VTM2 703 aa18.16■□□□□ 0.5
CLN6-220ENST00000637450 KDELC1Q6UW63 502 aa18.16■□□□□ 0.5
CLN6-220ENST00000637450 C11orf96Q7Z7L8 435 aa18.16■□□□□ 0.5
CLN6-220ENST00000637450 DTX3LQ8TDB6 740 aa18.16■□□□□ 0.5
CLN6-220ENST00000637450 TFB1MQ8WVM0 346 aaKnown RBP18.16■□□□□ 0.5
CLN6-220ENST00000637450 TGM7Q96PF1 710 aa18.16■□□□□ 0.5
CLN6-220ENST00000637450 TRABDQ9H4I3 376 aa18.16■□□□□ 0.5
CLN6-220ENST00000637450 SLC40A1Q9NP59 571 aa18.16■□□□□ 0.5
CLN6-220ENST00000637450 IL26Q9NPH9 171 aa18.16■□□□□ 0.5
CLN6-220ENST00000637450 POT1Q9NUX5 634 aa18.16■□□□□ 0.5
CLN6-220ENST00000637450 SPOPO43791 374 aa18.15■□□□□ 0.5
CLN6-220ENST00000637450 CST8O60676 142 aa18.15■□□□□ 0.5
CLN6-220ENST00000637450 PECAM1P16284 738 aaPredicted RBP18.15■□□□□ 0.5
CLN6-220ENST00000637450 PTMSP20962 102 aa18.15■□□□□ 0.5
CLN6-220ENST00000637450 DRG2P55039 364 aaKnown RBP18.15■□□□□ 0.5
CLN6-220ENST00000637450 WNT3AP56704 352 aa18.15■□□□□ 0.5
CLN6-220ENST00000637450 FOXM1Q08050 763 aa18.15■□□□□ 0.5
CLN6-220ENST00000637450 RBM12BQ8IXT5 1001 aaKnown RBP18.15■□□□□ 0.5
CLN6-220ENST00000637450 TTC30BQ8N4P2 665 aa18.15■□□□□ 0.5
CLN6-220ENST00000637450 ESX1Q8N693 406 aa18.15■□□□□ 0.5
CLN6-220ENST00000637450 BRSK1Q8TDC3 778 aa18.15■□□□□ 0.5
CLN6-220ENST00000637450 ZNF768Q9H5H4 540 aaKnown RBP18.15■□□□□ 0.5
CLN6-220ENST00000637450 UBR5O95071 2799 aaPredicted RBP18.14■□□□□ 0.5
CLN6-220ENST00000637450 OR52A4PA6NMU1 304 aa18.14■□□□□ 0.49
CLN6-220ENST00000637450 KCNJ13O60928 360 aa18.14■□□□□ 0.49
CLN6-220ENST00000637450 PRKAR1AP10644 381 aa18.14■□□□□ 0.49
CLN6-220ENST00000637450 NFKB1P19838 968 aa18.14■□□□□ 0.49
CLN6-220ENST00000637450 STAT5AP42229 794 aa18.14■□□□□ 0.49
CLN6-220ENST00000637450 LEPRP48357 1165 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms