RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 LDLRAP1Q5SW96 308 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 RANBP10Q6VN20 620 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 TRAPPC5Q8IUR0 188 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 SLITRK4Q8IW52 837 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 FAM71DQ8N9W8 422 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 AVL9Q8NBF6 648 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 OR10G6Q8NH81 332 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 DTX3LQ8TDB6 740 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 UBE2Q2Q8WVN8 375 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 DPYSL5Q9BPU6 564 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 TBL1YQ9BQ87 522 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 GORASP1Q9BQQ3 440 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 NUDT22Q9BRQ3 303 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 ZCCHC2Q9C0B9 1178 aaKnown RBP13.62□□□□□ -0.23
PNKP-228ENST00000637325 UGT1A7Q9HAW7 530 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 UGT1A10Q9HAW8 530 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 UGT1A8Q9HAW9 530 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 SARS2Q9NP81 518 aaKnown RBP13.62□□□□□ -0.23
PNKP-228ENST00000637325 PRDM8Q9NQV8 689 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 DNAJC16Q9Y2G8 782 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 ARL5AQ9Y689 179 aa13.62□□□□□ -0.23
PNKP-228ENST00000637325 IGHV1OR21-1A0A087WYE8 117 aa13.61□□□□□ -0.23
PNKP-228ENST00000637325 PDZK1P1A8MUH7 402 aa13.61□□□□□ -0.23
PNKP-228ENST00000637325 CDRT15L2A8MXV6 281 aa13.61□□□□□ -0.23
PNKP-228ENST00000637325 DUX1O43812 170 aa13.61□□□□□ -0.23
PNKP-228ENST00000637325 NRDCO43847 1150 aa13.61□□□□□ -0.23
PNKP-228ENST00000637325 CRTAMO95727 393 aa13.61□□□□□ -0.23
PNKP-228ENST00000637325 ADRA1AP35348 466 aa13.61□□□□□ -0.23
PNKP-228ENST00000637325 MAPK9P45984 424 aa13.61□□□□□ -0.23
PNKP-228ENST00000637325 MAPK10P53779 464 aa13.61□□□□□ -0.23
PNKP-228ENST00000637325 GPLD1P80108 840 aa13.61□□□□□ -0.23
PNKP-228ENST00000637325 PDE1BQ01064 536 aa13.61□□□□□ -0.23
PNKP-228ENST00000637325 OLIG2Q13516 323 aa13.61□□□□□ -0.23
PNKP-228ENST00000637325 SPARCL1Q14515 664 aa13.61□□□□□ -0.23
PNKP-228ENST00000637325 PARP6Q2NL67 630 aa13.61□□□□□ -0.23
PNKP-228ENST00000637325 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.61□□□□□ -0.23
PNKP-228ENST00000637325 TMPRSS9Q7Z410 1059 aa13.61□□□□□ -0.23
PNKP-228ENST00000637325 CLEC14AQ86T13 490 aa13.61□□□□□ -0.23
PNKP-228ENST00000637325 TRIM48Q8IWZ4 208 aa13.61□□□□□ -0.23
PNKP-228ENST00000637325 OR4K2Q8NGD2 314 aa13.61□□□□□ -0.23
PNKP-228ENST00000637325 ZNF398Q8TD17 642 aa13.61□□□□□ -0.23
PNKP-228ENST00000637325 CRELD1Q96HD1 420 aa13.61□□□□□ -0.23
PNKP-228ENST00000637325 TIMM29Q9BSF4 260 aa13.61□□□□□ -0.23
PNKP-228ENST00000637325 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.61□□□□□ -0.23
PNKP-228ENST00000637325 DPH1Q9BZG8 443 aa13.61□□□□□ -0.23
PNKP-228ENST00000637325 CPNE7Q9UBL6 633 aa13.61□□□□□ -0.23
PNKP-228ENST00000637325 SLC23A2Q9UGH3 650 aa13.61□□□□□ -0.23
PNKP-228ENST00000637325 FEZ2Q9UHY8 353 aaPredicted RBP13.61□□□□□ -0.23
PNKP-228ENST00000637325 TMPRSS11EQ9UL52 423 aa13.61□□□□□ -0.23
PNKP-228ENST00000637325 R3HDM2Q9Y2K5 976 aaKnown RBP13.61□□□□□ -0.23
PNKP-228ENST00000637325 ITPR1Q14643 2758 aa13.6□□□□□ -0.23
PNKP-228ENST00000637325 BPTFQ12830 3046 aa13.6□□□□□ -0.23
PNKP-228ENST00000637325 IGHV5-10-1A0A0J9YXX1 117 aa13.6□□□□□ -0.23
PNKP-228ENST00000637325 TCRBV7S2A1N4TA0A589 114 aa13.6□□□□□ -0.23
PNKP-228ENST00000637325 PSMD3O43242 534 aa13.6□□□□□ -0.23
PNKP-228ENST00000637325 VIPP01282 170 aa13.6□□□□□ -0.23
PNKP-228ENST00000637325 CCDC175P0C221 793 aa13.6□□□□□ -0.23
PNKP-228ENST00000637325 HOXB3P14651 431 aaPredicted RBP13.6□□□□□ -0.23
PNKP-228ENST00000637325 MSH3P20585 1137 aa13.6□□□□□ -0.23
PNKP-228ENST00000637325 IDSP22304 550 aa13.6□□□□□ -0.23
PNKP-228ENST00000637325 MPSTP25325 297 aa13.6□□□□□ -0.23
PNKP-228ENST00000637325 SLC5A2P31639 672 aa13.6□□□□□ -0.23
PNKP-228ENST00000637325 AKT1P31749 480 aa13.6□□□□□ -0.23
PNKP-228ENST00000637325 LIMK2P53671 638 aa13.6□□□□□ -0.23
PNKP-228ENST00000637325 TLE3Q04726 772 aa13.6□□□□□ -0.23
PNKP-228ENST00000637325 KLF1Q13351 362 aaPredicted RBP13.6□□□□□ -0.23
PNKP-228ENST00000637325 TRA2AQ13595 282 aaKnown RBP eCLIP13.6□□□□□ -0.23
PNKP-228ENST00000637325 PTPRCAPQ14761 206 aa13.6□□□□□ -0.23
PNKP-228ENST00000637325 RPS6KA1Q15418 735 aa13.6□□□□□ -0.23
PNKP-228ENST00000637325 SEPT7Q16181 437 aaKnown RBP13.6□□□□□ -0.23
PNKP-228ENST00000637325 P3H1Q32P28 736 aa13.6□□□□□ -0.23
PNKP-228ENST00000637325 KHDC1Q4VXA5 237 aaKnown RBP13.6□□□□□ -0.23
PNKP-228ENST00000637325 ZNF574Q6ZN55 896 aaPredicted RBP13.6□□□□□ -0.23
PNKP-228ENST00000637325 RCBTB1Q8NDN9 531 aa13.6□□□□□ -0.23
PNKP-228ENST00000637325 OR4D9Q8NGE8 314 aa13.6□□□□□ -0.23
PNKP-228ENST00000637325 CCDC74BQ96LY2 380 aa13.6□□□□□ -0.23
PNKP-228ENST00000637325 ALS2CR12Q96Q35 445 aa13.6□□□□□ -0.23
PNKP-228ENST00000637325 TMEM121Q9BTD3 319 aa13.6□□□□□ -0.23
PNKP-228ENST00000637325 ASB8Q9H765 288 aa13.6□□□□□ -0.23
PNKP-228ENST00000637325 LZTFL1Q9NQ48 299 aa13.6□□□□□ -0.23
PNKP-228ENST00000637325 FKBPLQ9UIM3 349 aa13.6□□□□□ -0.23
PNKP-228ENST00000637325 SDK2Q58EX2 2172 aa13.59□□□□□ -0.23
PNKP-228ENST00000637325 A6NCN8 305 aa13.59□□□□□ -0.23
PNKP-228ENST00000637325 HGSO14964 777 aaPredicted RBP13.59□□□□□ -0.23
PNKP-228ENST00000637325 KCNJ13O60928 360 aa13.59□□□□□ -0.23
PNKP-228ENST00000637325 PRAMEF1O95521 474 aa13.59□□□□□ -0.23
PNKP-228ENST00000637325 ITIH1P19827 911 aa13.59□□□□□ -0.23
PNKP-228ENST00000637325 CSTF2P33240 577 aaKnown RBP eCLIP13.59□□□□□ -0.23
PNKP-228ENST00000637325 UCNP55089 124 aa13.59□□□□□ -0.23
PNKP-228ENST00000637325 TMPRSS3P57727 454 aa13.59□□□□□ -0.23
PNKP-228ENST00000637325 CXADRP78310 365 aa13.59□□□□□ -0.23
PNKP-228ENST00000637325 TMPRSS15P98073 1019 aa13.59□□□□□ -0.23
PNKP-228ENST00000637325 SQSTM1Q13501 440 aa13.59□□□□□ -0.23
PNKP-228ENST00000637325 C16orf72Q14CZ0 275 aa13.59□□□□□ -0.23
PNKP-228ENST00000637325 SNAP47Q5SQN1 464 aa13.59□□□□□ -0.23
PNKP-228ENST00000637325 GPRC6AQ5T6X5 926 aa13.59□□□□□ -0.23
PNKP-228ENST00000637325 TMEM164Q5U3C3 297 aa13.59□□□□□ -0.23
PNKP-228ENST00000637325 TMEM71Q6P5X7 295 aa13.59□□□□□ -0.23
PNKP-228ENST00000637325 TMEM220Q6QAJ8 160 aa13.59□□□□□ -0.23
PNKP-228ENST00000637325 ZNF547Q8IVP9 402 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms