RNA–Protein interactions for RNA: ENST00000637175.1

ATRX-223, Transcript of ATRX, chromatin remodeler, human

TSL 5

Gene ATRX, Length 100 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATRX-223	ENST00000637175	NUDCD2	Q8WVJ2	157 aa		3.02	□□□□□ -1.93
ATRX-223	ENST00000637175	SNRNP27	Q8WVK2	155 aa	Known RBP	3.02	□□□□□ -1.93
ATRX-223	ENST00000637175	SLC44A1	Q8WWI5	657 aa		3.02	□□□□□ -1.93
ATRX-223	ENST00000637175	DNAAF4	Q8WXU2	420 aa		3.02	□□□□□ -1.93
ATRX-223	ENST00000637175	FIG4	Q92562	907 aa		3.02	□□□□□ -1.93
ATRX-223	ENST00000637175	PIGT	Q969N2	578 aa		3.02	□□□□□ -1.93
ATRX-223	ENST00000637175	JAKMIP2	Q96AA8	810 aa		3.02	□□□□□ -1.93
ATRX-223	ENST00000637175	THOC3	Q96J01	351 aa	Known RBP	3.02	□□□□□ -1.93
ATRX-223	ENST00000637175	NEUROD6	Q96NK8	337 aa		3.02	□□□□□ -1.93
ATRX-223	ENST00000637175	PAFAH2	Q99487	392 aa		3.02	□□□□□ -1.93
ATRX-223	ENST00000637175	MEIS3	Q99687	375 aa		3.02	□□□□□ -1.93
ATRX-223	ENST00000637175	KIFC3	Q9BVG8	833 aa		3.02	□□□□□ -1.93
ATRX-223	ENST00000637175	PPIL3	Q9H2H8	161 aa	Known RBP	3.02	□□□□□ -1.93
ATRX-223	ENST00000637175	PSD3	Q9NYI0	1048 aa		3.02	□□□□□ -1.93
ATRX-223	ENST00000637175	NKIRAS2	Q9NYR9	191 aa		3.02	□□□□□ -1.93
ATRX-223	ENST00000637175	MARCH4	Q9P2E8	410 aa	Predicted RBP	3.02	□□□□□ -1.93
ATRX-223	ENST00000637175	MORF4L1	Q9UBU8	362 aa		3.02	□□□□□ -1.93
ATRX-223	ENST00000637175	TSPYL4	Q9UJ04	414 aa		3.02	□□□□□ -1.93
ATRX-223	ENST00000637175	DBNL	Q9UJU6	430 aa	Known RBP	3.02	□□□□□ -1.93
ATRX-223	ENST00000637175	RPS6KA6	Q9UK32	745 aa		3.02	□□□□□ -1.93
ATRX-223	ENST00000637175	KLHL20	Q9Y2M5	609 aa		3.02	□□□□□ -1.93
ATRX-223	ENST00000637175	ASTN2	O75129	1339 aa	Predicted RBP	3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	ZNF541	Q9H0D2	1346 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	LOC100509620	A0A075B734	347 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175		A0A0G2JPF8	293 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	HNRNPCL3	B7ZW38	293 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	FIBP	O43427	364 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	LDB3	O75112	727 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	WISP2	O76076	250 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	CAMTA2	O94983	1202 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	PAPSS2	O95340	614 aa	Predicted RBP	3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	HNRNPCL4	P0DMR1	293 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	SAT1	P21673	171 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	CCKAR	P32238	428 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	USP8	P40818	1118 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	ILF3	Q12906	894 aa	Known RBP eCLIP	3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	ZBTB17	Q13105	803 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	HNRNPA0	Q13151	305 aa	Known RBP	3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	GRAP	Q13588	217 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	ZNF234	Q14588	700 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	GARNL3	Q5VVW2	1013 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	PRSS57	Q6UWY2	283 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	ZNF704	Q6ZNC4	412 aa	Predicted RBP	3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	ASB18	Q6ZVZ8	466 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	ZNF534	Q76KX8	674 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	GALNT13	Q8IUC8	556 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	TMTC2	Q8N394	836 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	MINDY1	Q8N5J2	469 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	CCDC89	Q8N998	374 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	GSDMB	Q8TAX9	411 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	UTP15	Q8TED0	518 aa	Known RBP	3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	PTPMT1	Q8WUK0	201 aa	Predicted RBP	3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	SLC38A5	Q8WUX1	472 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	CENPO	Q9BU64	300 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	RTN4R	Q9BZR6	473 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	CSTL1	Q9H114	145 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	OSGEPL1	Q9H4B0	414 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	DENND2D	Q9H6A0	471 aa	Predicted RBP	3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	C6orf106	Q9H6K1	298 aa	Predicted RBP	3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	DNAJC18	Q9H819	358 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	ARHGEF38	Q9NXL2	777 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	MRPL15	Q9P015	296 aa	Known RBP	3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	RCC2	Q9P258	522 aa	Known RBP	3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	KLHL9	Q9P2J3	617 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	AMACR	Q9UHK6	382 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	KCNS2	Q9ULS6	477 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	VDAC3	Q9Y277	283 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	DLGAP4	Q9Y2H0	992 aa		3.01	□□□□□ -1.93
ATRX-223	ENST00000637175	IGKV2D-30	A0A075B6S6	120 aa		3	□□□□□ -1.93
ATRX-223	ENST00000637175	IGHV4OR15-8	A0A075B7B6	117 aa		3	□□□□□ -1.93
ATRX-223	ENST00000637175		A0A1B0GUV1	79 aa		3	□□□□□ -1.93
ATRX-223	ENST00000637175	CTAGE9	A4FU28	777 aa		3	□□□□□ -1.93
ATRX-223	ENST00000637175	OR5K3	A6NET4	321 aa		3	□□□□□ -1.93
ATRX-223	ENST00000637175	HNRNPCL2	B2RXH8	293 aa		3	□□□□□ -1.93
ATRX-223	ENST00000637175		J3QR06	171 aa		3	□□□□□ -1.93
ATRX-223	ENST00000637175	TULP2	O00295	520 aa		3	□□□□□ -1.93
ATRX-223	ENST00000637175	SLC16A5	O15375	505 aa		3	□□□□□ -1.93
ATRX-223	ENST00000637175	TIMM44	O43615	452 aa		3	□□□□□ -1.93
ATRX-223	ENST00000637175	AVIL	O75366	819 aa		3	□□□□□ -1.93
ATRX-223	ENST00000637175	CREG1	O75629	220 aa		3	□□□□□ -1.93
ATRX-223	ENST00000637175	RSL1D1	O76021	490 aa	Known RBP	3	□□□□□ -1.93
ATRX-223	ENST00000637175	CTAGE8	P0CG41	777 aa		3	□□□□□ -1.93
ATRX-223	ENST00000637175	FAM106CP	P0CH98	169 aa		3	□□□□□ -1.93
ATRX-223	ENST00000637175	FGF3	P11487	239 aa	Predicted RBP	3	□□□□□ -1.93
ATRX-223	ENST00000637175	ITGA2	P17301	1181 aa		3	□□□□□ -1.93
ATRX-223	ENST00000637175	STAT2	P52630	851 aa		3	□□□□□ -1.93
ATRX-223	ENST00000637175	CTSC	P53634	463 aa		3	□□□□□ -1.93
ATRX-223	ENST00000637175	SIRPA	P78324	504 aa		3	□□□□□ -1.93
ATRX-223	ENST00000637175	GAGE2B	Q13066	116 aa		3	□□□□□ -1.93
ATRX-223	ENST00000637175	MEP1A	Q16819	746 aa		3	□□□□□ -1.93
ATRX-223	ENST00000637175	GAGE2E	Q4V326	116 aa		3	□□□□□ -1.93
ATRX-223	ENST00000637175	ZNF585B	Q52M93	769 aa		3	□□□□□ -1.93
ATRX-223	ENST00000637175	CFAP58	Q5T655	872 aa		3	□□□□□ -1.93
ATRX-223	ENST00000637175	GAGE2A	Q6NT46	116 aa		3	□□□□□ -1.93
ATRX-223	ENST00000637175	KRT74	Q7RTS7	529 aa		3	□□□□□ -1.93
ATRX-223	ENST00000637175	ADIPOR2	Q86V24	386 aa		3	□□□□□ -1.93
ATRX-223	ENST00000637175	TMPRSS12	Q86WS5	348 aa		3	□□□□□ -1.93
ATRX-223	ENST00000637175	DNAAF5	Q86Y56	855 aa		3	□□□□□ -1.93
ATRX-223	ENST00000637175	KMT5C	Q86Y97	462 aa		3	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms