RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 CYP4F12Q9HCS2 524 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 KCNK4Q9NYG8 393 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 FKBPLQ9UIM3 349 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 CEPT1Q9Y6K0 416 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 ALPK3Q96L96 1907 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 C2orf81A6NN90 581 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 NEDD8-MDP1E9PL57 170 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 CLPTM1O96005 669 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 PTPN2P17706 415 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 GRIA4P48058 902 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 CLCN5P51795 746 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 ZNF140P52738 457 aaPredicted RBP11.43□□□□□ -0.58
CLN6-217ENST00000636964 PLK1P53350 603 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 DCTN2Q13561 401 aaKnown RBP11.43□□□□□ -0.58
CLN6-217ENST00000636964 TAF1AQ15573 450 aaPredicted RBP11.43□□□□□ -0.58
CLN6-217ENST00000636964 MRNIPQ6NTE8 343 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 RETSATQ6NUM9 610 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 ZYG11AQ6WRX3 759 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 RPS27LQ71UM5 84 aaKnown RBP11.43□□□□□ -0.58
CLN6-217ENST00000636964 MARVELD2Q8N4S9 558 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 SLC26A7Q8TE54 656 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 FAIMQ9NVQ4 179 aa11.43□□□□□ -0.58
CLN6-217ENST00000636964 NLE1Q9NVX2 485 aaPredicted RBP11.43□□□□□ -0.58
CLN6-217ENST00000636964 POLR3BQ9NW08 1133 aaPredicted RBP11.43□□□□□ -0.58
CLN6-217ENST00000636964 SPECC1L-ADORA2AF8WAN1 911 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 TRIM24O15164 1050 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 PCNAP12004 261 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 S100A1P23297 94 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 HLA-FP30511 346 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 FMO4P31512 558 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 STT3AP46977 705 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 TUBB3Q13509 450 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 PEX6Q13608 980 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 APOFQ13790 326 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 CYLC2Q14093 348 aaPredicted RBP11.42□□□□□ -0.58
CLN6-217ENST00000636964 TRIP10Q15642 601 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 PLEKHG6Q3KR16 790 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 ANKDD1AQ495B1 522 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 PGM2L1Q6PCE3 622 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 ELMSAN1Q6PJG2 1045 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 MAVSQ7Z434 540 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 POU5F2Q8N7G0 328 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 NDUFA13Q9P0J0 144 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 KIAA1522Q9P206 1035 aaPredicted RBP11.42□□□□□ -0.58
CLN6-217ENST00000636964 CCDC160A6NGH7 325 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 CASQ2O14958 399 aaPredicted RBP11.42□□□□□ -0.58
CLN6-217ENST00000636964 CYBBP04839 570 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 CA3P07451 260 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 UBL4AP11441 157 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 CD1EP15812 388 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 LPOP22079 712 aaPredicted RBP11.42□□□□□ -0.58
CLN6-217ENST00000636964 PFKPQ01813 784 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 EML3Q32P44 896 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 FAM209AQ5JX71 171 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 DGKKQ5KSL6 1271 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 ASTLQ6HA08 431 aaPredicted RBP11.42□□□□□ -0.58
CLN6-217ENST00000636964 Q6ZNX1 250 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 PIANPQ8IYJ0 282 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 CPXM2Q8N436 756 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 C12orf76Q8N812 135 aaPredicted RBP11.42□□□□□ -0.58
CLN6-217ENST00000636964 NAT16Q8N8M0 369 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 FIBINQ8TAL6 211 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 TIMMDC1Q9NPL8 285 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 TDP1Q9NUW8 608 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 APPL1Q9UKG1 709 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 ARHGAP26Q9UNA1 814 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 FAM50BQ9Y247 325 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 EYSQ5T1H1 3165 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 A0A087X1B8 175 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 TARM1B6A8C7 271 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 STX7O15400 261 aaKnown RBP11.42□□□□□ -0.58
CLN6-217ENST00000636964 KCNA5P22460 613 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 CES1P23141 567 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 WEE1P30291 646 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 ZRANB3Q5FWF4 1079 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 WDR45BQ5MNZ6 344 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 C9orf50Q5SZB4 431 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 PSAPL1Q6NUJ1 521 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 SGCDQ92629 289 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 EXT2Q93063 718 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 EID2BQ96D98 161 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 WWP1Q9H0M0 922 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 C1orf21Q9H246 121 aa11.42□□□□□ -0.58
CLN6-217ENST00000636964 E9PBE3 544 aa11.41□□□□□ -0.58
CLN6-217ENST00000636964 OR1I1O60431 355 aa11.41□□□□□ -0.58
CLN6-217ENST00000636964 CCNT2O60583 730 aaKnown RBP11.41□□□□□ -0.58
CLN6-217ENST00000636964 KCNJ13O60928 360 aa11.41□□□□□ -0.58
CLN6-217ENST00000636964 CDH2P19022 906 aaPredicted RBP11.41□□□□□ -0.58
CLN6-217ENST00000636964 MPSTP25325 297 aa11.41□□□□□ -0.58
CLN6-217ENST00000636964 MC4RP32245 332 aa11.41□□□□□ -0.58
CLN6-217ENST00000636964 KCNC1P48547 511 aa11.41□□□□□ -0.58
CLN6-217ENST00000636964 POLD2P49005 469 aa11.41□□□□□ -0.58
CLN6-217ENST00000636964 STC1P52823 247 aa11.41□□□□□ -0.58
CLN6-217ENST00000636964 FAM83EQ2M2I3 478 aa11.41□□□□□ -0.58
CLN6-217ENST00000636964 ARL13AQ5H913 290 aaPredicted RBP11.41□□□□□ -0.58
CLN6-217ENST00000636964 OGFRL1Q5TC84 451 aaPredicted RBP11.41□□□□□ -0.58
CLN6-217ENST00000636964 LIPMQ5VYY2 423 aa11.41□□□□□ -0.58
CLN6-217ENST00000636964 FAM219BQ5XKK7 198 aa11.41□□□□□ -0.58
CLN6-217ENST00000636964 LYSMD3Q7Z3D4 306 aa11.41□□□□□ -0.58
CLN6-217ENST00000636964 TXNDC5Q8NBS9 432 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms