RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 MYOM2P54296 1465 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.24□□□□□ -1.89
VPS8-228ENST00000628962 ARHGEF37A1IGU5 675 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 TYW5A2RUC4 315 aaKnown RBP3.24□□□□□ -1.89
VPS8-228ENST00000628962 CBY3A6NI87 242 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 WDR46O15213 610 aaKnown RBP3.24□□□□□ -1.89
VPS8-228ENST00000628962 SLC7A4O43246 635 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 SEC14L5O43304 696 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 MITFO75030 526 aaPredicted RBP3.24□□□□□ -1.89
VPS8-228ENST00000628962 NFATC1O95644 943 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 MT-CYBP00156 380 aaPredicted RBP3.24□□□□□ -1.89
VPS8-228ENST00000628962 CHRNB1P11230 501 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 SP100P23497 879 aaPredicted RBP3.24□□□□□ -1.89
VPS8-228ENST00000628962 KLRC2P26717 231 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 HOXA13P31271 388 aaPredicted RBP3.24□□□□□ -1.89
VPS8-228ENST00000628962 HOXC13P31276 330 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 CIITAP33076 1130 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 ATP6V1E1P36543 226 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 CLK1P49759 484 aaKnown RBP3.24□□□□□ -1.89
VPS8-228ENST00000628962 ART1P52961 327 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 PNLIPRP2P54317 469 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 CLDN2P57739 230 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 MRPS5P82675 430 aaKnown RBP3.24□□□□□ -1.89
VPS8-228ENST00000628962 UBXN1Q04323 297 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 ALCAMQ13740 583 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 SHBQ15464 509 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 ZNF805Q5CZA5 627 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 CXorf66Q5JRM2 361 aaPredicted RBP3.24□□□□□ -1.89
VPS8-228ENST00000628962 VWA5B1Q5TIE3 1220 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 LRRC8EQ6NSJ5 796 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 C11orf88Q6PI97 169 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 ZNF474Q6S9Z5 364 aaPredicted RBP3.24□□□□□ -1.89
VPS8-228ENST00000628962 CLEC17AQ6ZS10 378 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 CCDC25Q86WR0 208 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 FAM185AQ8N0U4 392 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 NDUFAF2Q8N183 169 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 PAQR4Q8N4S7 273 aaPredicted RBP3.24□□□□□ -1.89
VPS8-228ENST00000628962 ZCCHC9Q8N567 271 aaKnown RBP3.24□□□□□ -1.89
VPS8-228ENST00000628962 EXD3Q8N9H8 876 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 KIF18AQ8NI77 898 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 GDAP1Q8TB36 358 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 SETD6Q8TBK2 473 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 MGARPQ8TDB4 240 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 TMEM170AQ8WVE7 144 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 ZFPM2Q8WW38 1151 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 RSPH1Q8WYR4 309 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 KAT2BQ92831 832 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 ZNF622Q969S3 477 aaKnown RBP eCLIP3.24□□□□□ -1.89
VPS8-228ENST00000628962 EME1Q96AY2 570 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 PTERQ96BW5 349 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 FER1L6-AS2Q96M78 137 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 TMEM68Q96MH6 324 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 OR2A14Q96R47 310 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 GAD1Q99259 594 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 THUMPD3Q9BV44 507 aaKnown RBP3.24□□□□□ -1.89
VPS8-228ENST00000628962 SEZ6LQ9BYH1 1024 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 TM6SF1Q9BZW5 370 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 C2orf40Q9H1Z8 148 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 PDZD7Q9H5P4 517 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 ACTR5Q9H9F9 607 aaPredicted RBP3.24□□□□□ -1.89
VPS8-228ENST00000628962 HIF1ANQ9NWT6 349 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 AMACRQ9UHK6 382 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 IPO11Q9UI26 975 aaKnown RBP3.24□□□□□ -1.89
VPS8-228ENST00000628962 ISY1Q9ULR0 285 aaKnown RBP3.24□□□□□ -1.89
VPS8-228ENST00000628962 R3HDM2Q9Y2K5 976 aaKnown RBP3.24□□□□□ -1.89
VPS8-228ENST00000628962 CMAHPQ9Y471 501 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 POMT1Q9Y6A1 747 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 MAU2Q9Y6X3 613 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 TROQ12816 1431 aaPredicted RBP3.24□□□□□ -1.89
VPS8-228ENST00000628962 FMN1Q68DA7 1419 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 ATP10DQ9P241 1426 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 ZNF644Q9H582 1327 aaPredicted RBP3.23□□□□□ -1.89
VPS8-228ENST00000628962 CHD4Q14839 1912 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 WDR81Q562E7 1941 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 A0A0A0MQY5 61 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 FAM237AA0A1B0GTK4 181 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 PI4K2BG5E9Z4 385 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 H3BQ06 376 aaPredicted RBP3.23□□□□□ -1.89
VPS8-228ENST00000628962 EBAG9O00559 213 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 ADAMDEC1O15204 470 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 PAPSS1O43252 624 aaPredicted RBP3.23□□□□□ -1.89
VPS8-228ENST00000628962 KIF1CO43896 1103 aaKnown RBP3.23□□□□□ -1.89
VPS8-228ENST00000628962 ATP2C2O75185 946 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 GPC4O75487 556 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 IFNA2P01563 188 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 FYNP06241 537 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 TPOP07202 933 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 ACTN1P12814 892 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 ZNF182P17025 639 aaPredicted RBP3.23□□□□□ -1.89
VPS8-228ENST00000628962 ITGAXP20702 1163 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 PTAFRP25105 342 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 TLX1P31314 330 aaPredicted RBP3.23□□□□□ -1.89
VPS8-228ENST00000628962 MMP14P50281 582 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 CLCN3P51790 818 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 CLCNKBP51801 687 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 CSE1LP55060 971 aaKnown RBP3.23□□□□□ -1.89
VPS8-228ENST00000628962 GRAPQ13588 217 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 KCNC3Q14003 757 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 TNIP1Q15025 636 aa3.23□□□□□ -1.89
VPS8-228ENST00000628962 TCTN1Q2MV58 587 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms