RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 LRRC23Q53EV4 343 aaPredicted RBP7.44□□□□□ -1.22
PKP4-217ENST00000628904 TBCELQ5QJ74 424 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 FBXL19Q6PCT2 694 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 SLC22A9Q8IVM8 553 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 CLYBLQ8N0X4 340 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 FBXW8Q8N3Y1 598 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 SPDYE1Q8NFV5 336 aaPredicted RBP7.44□□□□□ -1.22
PKP4-217ENST00000628904 LRTOMTQ8WZ04 291 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 SH3BP4Q9P0V3 963 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 SLAMF8Q9P0V8 285 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 MTRRQ9UBK8 725 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 OPTCQ9UBM4 332 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 USP22Q9UPT9 525 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 PTPRFP10586 1907 aa7.44□□□□□ -1.22
PKP4-217ENST00000628904 DPPA5A6NC42 116 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 CCDC154A6NI56 674 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 TTC34A8MYJ7 566 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 CDK14O94921 469 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 WDR47O94967 919 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 VNN2O95498 520 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 GSRP00390 522 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 HMGA1P17096 107 aaKnown RBP7.43□□□□□ -1.22
PKP4-217ENST00000628904 ETV3P41162 512 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 SKIV2L2P42285 1042 aaKnown RBP7.43□□□□□ -1.22
PKP4-217ENST00000628904 MAPKAPK2P49137 400 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 ZNF135P52742 658 aaPredicted RBP7.43□□□□□ -1.22
PKP4-217ENST00000628904 SLC18A1P54219 525 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 MEF2AQ02078 507 aaPredicted RBP7.43□□□□□ -1.22
PKP4-217ENST00000628904 NAB1Q13506 487 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 GRM2Q14416 872 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 LAPTM4AQ15012 233 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 ACAP2Q15057 778 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 C2orf27AQ580R0 203 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 TECRLQ5HYJ1 363 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 IL23RQ5VWK5 629 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 ANKRD26P1Q6NSI1 321 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 TIFABQ6ZNK6 161 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 GPRIN3Q6ZVF9 776 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 NECAB2Q7Z6G3 386 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 GALNT10Q86SR1 603 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 PCYOX1LQ8NBM8 494 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 RNF217Q8TC41 542 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 SELENOMQ8WWX9 145 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 APOLD1Q96LR9 279 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 C1orf74Q96LT6 269 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 COPS8Q99627 209 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 TDRD1Q9BXT4 1180 aaKnown RBP7.43□□□□□ -1.22
PKP4-217ENST00000628904 PCDH12Q9NPG4 1184 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 IGSF5Q9NSI5 407 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 DNAJC15Q9Y5T4 150 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 RAD54BQ9Y620 910 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 GNG14A0A1W2PPG7 69 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 SDHDO14521 159 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 UBFD1O14562 309 aaKnown RBP7.43□□□□□ -1.22
PKP4-217ENST00000628904 NRP2O60462 931 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 HNRNPCL1O60812 293 aaKnown RBP7.43□□□□□ -1.22
PKP4-217ENST00000628904 FKBP9O95302 570 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 ZNF682O95780 498 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 HSPA8P11142 646 aaKnown RBP7.43□□□□□ -1.22
PKP4-217ENST00000628904 ATP6V1B2P21281 511 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 MCCD1P59942 119 aaPredicted RBP7.43□□□□□ -1.22
PKP4-217ENST00000628904 SNRPD1P62314 119 aaKnown RBP7.43□□□□□ -1.22
PKP4-217ENST00000628904 FKBP9P1Q75LS8 142 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 DHDDSQ86SQ9 333 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 CHPFQ8IZ52 775 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 LSMEM2Q8N112 164 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 CLEC4FQ8N1N0 589 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 PGBD3Q8N328 593 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 KDM1BQ8NB78 822 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 SMG7Q92540 1137 aaKnown RBP7.43□□□□□ -1.22
PKP4-217ENST00000628904 NSMCE3Q96MG7 304 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 PKMYT1Q99640 499 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 TRIM54Q9BYV2 358 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 ADNPQ9H2P0 1102 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 MFSD1Q9H3U5 465 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 PARVBQ9HBI1 364 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 SPASTQ9UBP0 616 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 PRSS21Q9Y6M0 314 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 GVINP1Q7Z2Y8 2422 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 SBK3P0C264 359 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 LBPP18428 481 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 MSH3P20585 1137 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 RPL34P49207 117 aaKnown RBP7.43□□□□□ -1.22
PKP4-217ENST00000628904 DGKEP52429 567 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 WDR5P61964 334 aaKnown RBP7.43□□□□□ -1.22
PKP4-217ENST00000628904 CEACAM7Q14002 265 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 PLCL1Q15111 1095 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 PHKG1Q16816 387 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 PLEKHG6Q3KR16 790 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 UNC50Q53HI1 259 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 ARHGAP15Q53QZ3 475 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 DGKKQ5KSL6 1271 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 NAIF1Q69YI7 327 aaPredicted RBP7.43□□□□□ -1.22
PKP4-217ENST00000628904 RAET1GQ6H3X3 334 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 ZBTB49Q6ZSB9 765 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 KBTBD2Q8IY47 623 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 ZNF786Q8N393 782 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 LILRA3Q8N6C8 439 aaPredicted RBP7.43□□□□□ -1.22
PKP4-217ENST00000628904 CCDC126Q96EE4 140 aa7.43□□□□□ -1.22
PKP4-217ENST00000628904 ZBTB18Q99592 522 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms